RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 KRTAP21-3Q3LHN1 58 aa5.98□□□□□ -1.45
TOP3A-208ENST00000542570 KLKP1Q107X0 134 aa5.98□□□□□ -1.45
TOP3A-208ENST00000542570 C8orf87E5RJ46 101 aa5.97□□□□□ -1.45
TOP3A-208ENST00000542570 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.46
TOP3A-208ENST00000542570 IGLV7-46A0A075B6I9 117 aa5.94□□□□□ -1.46
TOP3A-208ENST00000542570 Q8N9P0 234 aaPredicted RBP5.94□□□□□ -1.46
TOP3A-208ENST00000542570 A8MUN3 132 aa5.93□□□□□ -1.46
TOP3A-208ENST00000542570 KRTAP13-2Q52LG2 175 aa5.92□□□□□ -1.46
TOP3A-208ENST00000542570 Q5XG85 94 aa5.92□□□□□ -1.46
TOP3A-208ENST00000542570 LOC101927531A0A1B0GV80 90 aa5.92□□□□□ -1.46
TOP3A-208ENST00000542570 FAM229BQ4G0N7 80 aa5.92□□□□□ -1.46
TOP3A-208ENST00000542570 ACYP2P14621 99 aa5.91□□□□□ -1.46
TOP3A-208ENST00000542570 COA5Q86WW8 74 aa5.9□□□□□ -1.46
TOP3A-208ENST00000542570 KRTAP13-1Q8IUC0 172 aa5.9□□□□□ -1.46
TOP3A-208ENST00000542570 LINC00483Q53H64 154 aa5.89□□□□□ -1.47
TOP3A-208ENST00000542570 OXTP01178 125 aa5.89□□□□□ -1.47
TOP3A-208ENST00000542570 CD164Q04900 197 aa5.88□□□□□ -1.47
TOP3A-208ENST00000542570 H3BPC8 53 aa5.87□□□□□ -1.47
TOP3A-208ENST00000542570 HUWE1Q7Z6Z7 4374 aaKnown RBP5.86□□□□□ -1.47
TOP3A-208ENST00000542570 COX6B2Q6YFQ2 88 aa5.84□□□□□ -1.47
TOP3A-208ENST00000542570 A0A1B0GU69 56 aa5.84□□□□□ -1.47
TOP3A-208ENST00000542570 HRES1P13985 223 aa5.83□□□□□ -1.48
TOP3A-208ENST00000542570 Q5W150 140 aa5.82□□□□□ -1.48
TOP3A-208ENST00000542570 ANK2Q01484 3957 aa5.81□□□□□ -1.48
TOP3A-208ENST00000542570 LYSTQ99698 3801 aa5.8□□□□□ -1.48
TOP3A-208ENST00000542570 FP248Q71RG6 208 aaPredicted RBP5.8□□□□□ -1.48
TOP3A-208ENST00000542570 Q6ZSA8 131 aa5.79□□□□□ -1.48
TOP3A-208ENST00000542570 KRTAP29-1A8MX34 341 aaPredicted RBP5.78□□□□□ -1.48
TOP3A-208ENST00000542570 SPINK7P58062 85 aa5.78□□□□□ -1.48
TOP3A-208ENST00000542570 CYP4F30PQ9H0H9 118 aa5.78□□□□□ -1.48
TOP3A-208ENST00000542570 ZCCHC13Q8WW36 166 aaKnown RBP5.76□□□□□ -1.49
TOP3A-208ENST00000542570 CMYA5Q8N3K9 4069 aa5.76□□□□□ -1.49
TOP3A-208ENST00000542570 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
TOP3A-208ENST00000542570 DNAH9Q9NYC9 4486 aa5.73□□□□□ -1.49
TOP3A-208ENST00000542570 K7ERS5 55 aa5.72□□□□□ -1.49
TOP3A-208ENST00000542570 LINC01554Q52M75 96 aa5.72□□□□□ -1.49
TOP3A-208ENST00000542570 PLECQ15149 4684 aaKnown RBP5.71□□□□□ -1.5
TOP3A-208ENST00000542570 PRKDCP78527 4128 aaKnown RBP5.69□□□□□ -1.5
TOP3A-208ENST00000542570 A0A0D9SG42 100 aa5.69□□□□□ -1.5
TOP3A-208ENST00000542570 DNAH10Q8IVF4 4471 aa5.68□□□□□ -1.5
TOP3A-208ENST00000542570 SPANXA2-OT1Q8N9U9 137 aa5.67□□□□□ -1.5
TOP3A-208ENST00000542570 RBM12B-AS1Q9P1G2 102 aa5.66□□□□□ -1.5
TOP3A-208ENST00000542570 DNAH3Q8TD57 4116 aa5.63□□□□□ -1.51
TOP3A-208ENST00000542570 Q1T7F1 81 aa5.62□□□□□ -1.51
TOP3A-208ENST00000542570 A0A1B0GVY2 172 aa5.62□□□□□ -1.51
TOP3A-208ENST00000542570 STARD9Q9P2P6 4700 aa5.6□□□□□ -1.51
TOP3A-208ENST00000542570 M0R2T5 61 aa5.6□□□□□ -1.51
TOP3A-208ENST00000542570 DNAH11Q96DT5 4516 aa5.59□□□□□ -1.51
TOP3A-208ENST00000542570 UQCR11O14957 56 aa5.59□□□□□ -1.51
TOP3A-208ENST00000542570 KTN1-AS1Q86SY8 53 aa5.58□□□□□ -1.52
TOP3A-208ENST00000542570 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
TOP3A-208ENST00000542570 A8MU10 97 aa5.56□□□□□ -1.52
TOP3A-208ENST00000542570 ASB16-AS1Q495Z4 193 aa5.56□□□□□ -1.52
TOP3A-208ENST00000542570 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
TOP3A-208ENST00000542570 Q5VV11 94 aa5.55□□□□□ -1.52
TOP3A-208ENST00000542570 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
TOP3A-208ENST00000542570 FAT1Q14517 4588 aa5.51□□□□□ -1.53
TOP3A-208ENST00000542570 SEC61BP60468 96 aaKnown RBP5.51□□□□□ -1.53
TOP3A-208ENST00000542570 KMT2AQ03164 3969 aa5.51□□□□□ -1.53
TOP3A-208ENST00000542570 DNAH5Q8TE73 4624 aa5.5□□□□□ -1.53
TOP3A-208ENST00000542570 DNAH1Q9P2D7 4330 aa5.5□□□□□ -1.53
TOP3A-208ENST00000542570 S4R3F8 94 aa5.5□□□□□ -1.53
TOP3A-208ENST00000542570 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
TOP3A-208ENST00000542570 CDC42SE1Q9NRR8 79 aa5.49□□□□□ -1.53
TOP3A-208ENST00000542570 A0A1B0GU33 70 aa5.48□□□□□ -1.53
TOP3A-208ENST00000542570 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
TOP3A-208ENST00000542570 RPS29P62273 56 aaKnown RBP5.46□□□□□ -1.54
TOP3A-208ENST00000542570 SPATA8Q6RVD6 105 aa5.45□□□□□ -1.54
TOP3A-208ENST00000542570 XP32Q5T750 250 aa5.45□□□□□ -1.54
TOP3A-208ENST00000542570 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
TOP3A-208ENST00000542570 Q75L30 129 aa5.44□□□□□ -1.54
TOP3A-208ENST00000542570 LCA10Q71F78 164 aa5.44□□□□□ -1.54
TOP3A-208ENST00000542570 RPL37P61927 97 aaKnown RBP5.43□□□□□ -1.54
TOP3A-208ENST00000542570 KRTAP4-5Q9BYR2 181 aa5.43□□□□□ -1.54
TOP3A-208ENST00000542570 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
TOP3A-208ENST00000542570 A8MUU9 505 aa5.42□□□□□ -1.54
TOP3A-208ENST00000542570 KRTAP16-1A8MUX0 517 aa5.41□□□□□ -1.54
TOP3A-208ENST00000542570 KRTAP10-8P60410 259 aa5.41□□□□□ -1.54
TOP3A-208ENST00000542570 KIAA1109Q2LD37 5005 aa5.4□□□□□ -1.54
TOP3A-208ENST00000542570 C20orf166-AS1Q96NR2 134 aa5.4□□□□□ -1.55
TOP3A-208ENST00000542570 LRP1BQ9NZR2 4599 aa5.38□□□□□ -1.55
TOP3A-208ENST00000542570 ADM2Q7Z4H4 148 aa5.37□□□□□ -1.55
TOP3A-208ENST00000542570 R4GN34 69 aa5.37□□□□□ -1.55
TOP3A-208ENST00000542570 VPS13DQ5THJ4 4388 aa5.36□□□□□ -1.55
TOP3A-208ENST00000542570 DNAH7Q8WXX0 4024 aa5.35□□□□□ -1.55
TOP3A-208ENST00000542570 DNAH8Q96JB1 4490 aa5.35□□□□□ -1.55
TOP3A-208ENST00000542570 H3BS24 57 aa5.34□□□□□ -1.55
TOP3A-208ENST00000542570 DYNC1H1Q14204 4646 aaKnown RBP5.34□□□□□ -1.55
TOP3A-208ENST00000542570 DYNC2H1Q8NCM8 4307 aaKnown RBP5.33□□□□□ -1.56
TOP3A-208ENST00000542570 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
TOP3A-208ENST00000542570 RYR1P21817 5038 aa5.33□□□□□ -1.56
TOP3A-208ENST00000542570 M0QZ58 72 aa5.32□□□□□ -1.56
TOP3A-208ENST00000542570 H1FX-AS1Q4G0G2 97 aa5.32□□□□□ -1.56
TOP3A-208ENST00000542570 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
TOP3A-208ENST00000542570 MYCBP2O75592 4640 aa5.3□□□□□ -1.56
TOP3A-208ENST00000542570 A6NN06 94 aa5.3□□□□□ -1.56
TOP3A-208ENST00000542570 HYDINQ4G0P3 5121 aa5.29□□□□□ -1.56
TOP3A-208ENST00000542570 RYR3Q15413 4870 aa5.27□□□□□ -1.57
TOP3A-208ENST00000542570 KRTAP10-4P60372 401 aaPredicted RBP5.27□□□□□ -1.57
TOP3A-208ENST00000542570 KMT2CQ8NEZ4 4911 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms