RNA–Protein interactions for RNA: ENST00000542335.5

PDE1B-204, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,782 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-204ENST00000542335 RTL8CO15255 209 aa7.32□□□□□ -1.24
PDE1B-204ENST00000542335 CASC2Q6XLA1 102 aa7.32□□□□□ -1.24
PDE1B-204ENST00000542335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.32□□□□□ -1.24
PDE1B-204ENST00000542335 NDUFB1O75438 58 aa7.31□□□□□ -1.24
PDE1B-204ENST00000542335 DNAH17Q9UFH2 4485 aa7.31□□□□□ -1.24
PDE1B-204ENST00000542335 PLA2G1BP04054 148 aaKnown RBP7.31□□□□□ -1.24
PDE1B-204ENST00000542335 LINC00472Q9H8W2 130 aa7.3□□□□□ -1.24
PDE1B-204ENST00000542335 IGLV5-52A0A0A0MRZ9 124 aa7.3□□□□□ -1.24
PDE1B-204ENST00000542335 RETNLBQ9BQ08 111 aa7.3□□□□□ -1.24
PDE1B-204ENST00000542335 HECTD4Q9Y4D8 3996 aa7.28□□□□□ -1.24
PDE1B-204ENST00000542335 KRTAP29-1A8MX34 341 aaPredicted RBP7.28□□□□□ -1.24
PDE1B-204ENST00000542335 H0Y9P7 68 aa7.28□□□□□ -1.24
PDE1B-204ENST00000542335 LINC00483Q53H64 154 aa7.28□□□□□ -1.24
PDE1B-204ENST00000542335 HYDINQ4G0P3 5121 aa7.28□□□□□ -1.24
PDE1B-204ENST00000542335 A8MWP4 228 aa7.27□□□□□ -1.25
PDE1B-204ENST00000542335 SPINK7P58062 85 aa7.25□□□□□ -1.25
PDE1B-204ENST00000542335 PLAC8Q9NZF1 115 aa7.24□□□□□ -1.25
PDE1B-204ENST00000542335 KRTAP10-2P60368 255 aa7.23□□□□□ -1.25
PDE1B-204ENST00000542335 DNAH8Q96JB1 4490 aa7.23□□□□□ -1.25
PDE1B-204ENST00000542335 SPANXA2-OT1Q8N9U9 137 aa7.22□□□□□ -1.25
PDE1B-204ENST00000542335 PSORS1C2Q9UIG4 136 aa7.22□□□□□ -1.25
PDE1B-204ENST00000542335 ASB16-AS1Q495Z4 193 aa7.21□□□□□ -1.25
PDE1B-204ENST00000542335 DNAH6Q9C0G6 4158 aa7.21□□□□□ -1.25
PDE1B-204ENST00000542335 IGLV9-49A0A0B4J1Y8 123 aa7.2□□□□□ -1.26
PDE1B-204ENST00000542335 Q96NJ1 140 aa7.2□□□□□ -1.26
PDE1B-204ENST00000542335 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
PDE1B-204ENST00000542335 H3BPC8 53 aa7.2□□□□□ -1.26
PDE1B-204ENST00000542335 ALMS1Q8TCU4 4167 aa7.19□□□□□ -1.26
PDE1B-204ENST00000542335 ZNF861PO60384 105 aa7.19□□□□□ -1.26
PDE1B-204ENST00000542335 PCOTHQ58A44 107 aa7.19□□□□□ -1.26
PDE1B-204ENST00000542335 IGHV6-1A0A0B4J1U7 121 aa7.19□□□□□ -1.26
PDE1B-204ENST00000542335 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
PDE1B-204ENST00000542335 COA5Q86WW8 74 aa7.19□□□□□ -1.26
PDE1B-204ENST00000542335 FRAS1Q86XX4 4008 aa7.18□□□□□ -1.26
PDE1B-204ENST00000542335 SPAG11AQ6PDA7 123 aa7.14□□□□□ -1.27
PDE1B-204ENST00000542335 DNAH5Q8TE73 4624 aa7.13□□□□□ -1.27
PDE1B-204ENST00000542335 DNAH11Q96DT5 4516 aa7.13□□□□□ -1.27
PDE1B-204ENST00000542335 CSAG1Q6PB30 78 aa7.13□□□□□ -1.27
PDE1B-204ENST00000542335 FAT2Q9NYQ8 4349 aa7.13□□□□□ -1.27
PDE1B-204ENST00000542335 SACSQ9NZJ4 4579 aa7.13□□□□□ -1.27
PDE1B-204ENST00000542335 A0A087X002 238 aa7.12□□□□□ -1.27
PDE1B-204ENST00000542335 CIRBP-AS1Q8TBR5 109 aa7.12□□□□□ -1.27
PDE1B-204ENST00000542335 KRTAP10-1P60331 282 aa7.12□□□□□ -1.27
PDE1B-204ENST00000542335 IGLV7-43P04211 117 aa7.11□□□□□ -1.27
PDE1B-204ENST00000542335 C8orf17Q9NRJ1 99 aa7.11□□□□□ -1.27
PDE1B-204ENST00000542335 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
PDE1B-204ENST00000542335 TP53AIP1Q9HCN2 124 aa7.1□□□□□ -1.27
PDE1B-204ENST00000542335 A0A1B0GVX0 72 aa7.09□□□□□ -1.27
PDE1B-204ENST00000542335 PKD1P98161 4303 aa7.09□□□□□ -1.27
PDE1B-204ENST00000542335 ANAPC11Q9NYG5 84 aa7.08□□□□□ -1.28
PDE1B-204ENST00000542335 CDK2AP2O75956 126 aa7.07□□□□□ -1.28
PDE1B-204ENST00000542335 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
PDE1B-204ENST00000542335 ROMO1P60602 79 aa7.05□□□□□ -1.28
PDE1B-204ENST00000542335 KMT2CQ8NEZ4 4911 aaKnown RBP7.03□□□□□ -1.28
PDE1B-204ENST00000542335 MRPL34Q9BQ48 92 aaKnown RBP7.03□□□□□ -1.28
PDE1B-204ENST00000542335 HRES1P13985 223 aa7.03□□□□□ -1.28
PDE1B-204ENST00000542335 SSBP3-AS1Q7Z2R9 100 aa7.03□□□□□ -1.28
PDE1B-204ENST00000542335 Q6ZSA8 131 aa7.02□□□□□ -1.29
PDE1B-204ENST00000542335 LRP1BQ9NZR2 4599 aa7□□□□□ -1.29
PDE1B-204ENST00000542335 NOTCH2NLQ7Z3S9 236 aa6.99□□□□□ -1.29
PDE1B-204ENST00000542335 RYR2Q92736 4967 aa6.96□□□□□ -1.3
PDE1B-204ENST00000542335 SPINK6Q6UWN8 80 aa6.95□□□□□ -1.3
PDE1B-204ENST00000542335 SMR3BP02814 79 aaPredicted RBP6.95□□□□□ -1.3
PDE1B-204ENST00000542335 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
PDE1B-204ENST00000542335 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
PDE1B-204ENST00000542335 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
PDE1B-204ENST00000542335 KRTAP13-2Q52LG2 175 aa6.92□□□□□ -1.3
PDE1B-204ENST00000542335 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
PDE1B-204ENST00000542335 Q5W150 140 aa6.91□□□□□ -1.3
PDE1B-204ENST00000542335 DYNC1H1Q14204 4646 aaKnown RBP6.9□□□□□ -1.3
PDE1B-204ENST00000542335 P0C880 135 aa6.89□□□□□ -1.31
PDE1B-204ENST00000542335 SPATA8Q6RVD6 105 aa6.89□□□□□ -1.31
PDE1B-204ENST00000542335 KRTAP1-4P0C5Y4 121 aa6.87□□□□□ -1.31
PDE1B-204ENST00000542335 RYR3Q15413 4870 aa6.84□□□□□ -1.31
PDE1B-204ENST00000542335 FAT1Q14517 4588 aa6.83□□□□□ -1.32
PDE1B-204ENST00000542335 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
PDE1B-204ENST00000542335 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
PDE1B-204ENST00000542335 APOBP04114 4563 aaKnown RBP6.8□□□□□ -1.32
PDE1B-204ENST00000542335 KRTAP16-1A8MUX0 517 aa6.8□□□□□ -1.32
PDE1B-204ENST00000542335 ACYP2P14621 99 aa6.78□□□□□ -1.32
PDE1B-204ENST00000542335 SPINK1P00995 79 aa6.76□□□□□ -1.33
PDE1B-204ENST00000542335 TYMSOSQ8TAI1 123 aa6.76□□□□□ -1.33
PDE1B-204ENST00000542335 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
PDE1B-204ENST00000542335 A0A1B0GU69 56 aa6.74□□□□□ -1.33
PDE1B-204ENST00000542335 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
PDE1B-204ENST00000542335 DMAC1Q96GE9 116 aa6.74□□□□□ -1.33
PDE1B-204ENST00000542335 UQCR11O14957 56 aa6.73□□□□□ -1.33
PDE1B-204ENST00000542335 KRTAP10-4P60372 401 aaPredicted RBP6.7□□□□□ -1.34
PDE1B-204ENST00000542335 A8MUU9 505 aa6.69□□□□□ -1.34
PDE1B-204ENST00000542335 LINC00304Q8N9R0 145 aa6.68□□□□□ -1.34
PDE1B-204ENST00000542335 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.34
PDE1B-204ENST00000542335 NDUFAF8A1L188 74 aa6.65□□□□□ -1.35
PDE1B-204ENST00000542335 Q5VSD8 79 aa6.64□□□□□ -1.35
PDE1B-204ENST00000542335 HSPG2P98160 4391 aa6.64□□□□□ -1.35
PDE1B-204ENST00000542335 C20orf166-AS1Q96NR2 134 aa6.64□□□□□ -1.35
PDE1B-204ENST00000542335 FLG2Q5D862 2391 aaPredicted RBP6.63□□□□□ -1.35
PDE1B-204ENST00000542335 IGKV2D-30A0A075B6S6 120 aa6.62□□□□□ -1.35
PDE1B-204ENST00000542335 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
PDE1B-204ENST00000542335 EPPK1P58107 5090 aaKnown RBP6.61□□□□□ -1.35
PDE1B-204ENST00000542335 KRTAP17-1Q9BYP8 105 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms