RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 OBSCN-AS1Q96MR7 158 aa4.98□□□□□ -1.61
SNHG1-215ENST00000540904 DSCR8Q96T75 97 aa4.97□□□□□ -1.61
SNHG1-215ENST00000540904 VPS25Q9BRG1 176 aa4.97□□□□□ -1.61
SNHG1-215ENST00000540904 TRBV20-1A0A075B6N2 111 aa4.96□□□□□ -1.62
SNHG1-215ENST00000540904 TAX1BP3O14907 124 aa4.96□□□□□ -1.62
SNHG1-215ENST00000540904 RPL37P61927 97 aaKnown RBP4.96□□□□□ -1.62
SNHG1-215ENST00000540904 Q96NJ1 140 aa4.96□□□□□ -1.62
SNHG1-215ENST00000540904 C9orf118A6NHY6 69 aa4.95□□□□□ -1.62
SNHG1-215ENST00000540904 C9JAW5 83 aa4.95□□□□□ -1.62
SNHG1-215ENST00000540904 SIGMAR1Q99720 223 aa4.95□□□□□ -1.62
SNHG1-215ENST00000540904 GTF2H5Q6ZYL4 71 aa4.94□□□□□ -1.62
SNHG1-215ENST00000540904 JMJD7-PLA2G4BH0Y9G9 81 aa4.93□□□□□ -1.62
SNHG1-215ENST00000540904 IGKV4-1P06312 121 aa4.93□□□□□ -1.62
SNHG1-215ENST00000540904 DEFB116Q30KQ4 102 aa4.93□□□□□ -1.62
SNHG1-215ENST00000540904 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
SNHG1-215ENST00000540904 A0A1W2PPM0 123 aa4.92□□□□□ -1.62
SNHG1-215ENST00000540904 DSCR10P59022 87 aa4.91□□□□□ -1.62
SNHG1-215ENST00000540904 Q75L30 129 aa4.91□□□□□ -1.62
SNHG1-215ENST00000540904 LINC00472Q9H8W2 130 aa4.91□□□□□ -1.62
SNHG1-215ENST00000540904 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
SNHG1-215ENST00000540904 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.63
SNHG1-215ENST00000540904 Q6ZQT0 140 aa4.9□□□□□ -1.63
SNHG1-215ENST00000540904 MTURNQ8N3F0 131 aa4.9□□□□□ -1.63
SNHG1-215ENST00000540904 C14orf132Q9NPU4 83 aa4.9□□□□□ -1.63
SNHG1-215ENST00000540904 LOC110117498A0A087WWA1 95 aa4.89□□□□□ -1.63
SNHG1-215ENST00000540904 H3BT86 120 aa4.88□□□□□ -1.63
SNHG1-215ENST00000540904 K7EP34 96 aa4.88□□□□□ -1.63
SNHG1-215ENST00000540904 PDE6GP18545 87 aa4.88□□□□□ -1.63
SNHG1-215ENST00000540904 LINC00313P59037 77 aa4.88□□□□□ -1.63
SNHG1-215ENST00000540904 C21orf62-AS1Q17RA5 79 aa4.88□□□□□ -1.63
SNHG1-215ENST00000540904 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
SNHG1-215ENST00000540904 SPCS1Q9Y6A9 102 aa4.88□□□□□ -1.63
SNHG1-215ENST00000540904 IGHV6-1A0A0B4J1U7 121 aa4.87□□□□□ -1.63
SNHG1-215ENST00000540904 H3BS24 57 aa4.87□□□□□ -1.63
SNHG1-215ENST00000540904 A8MUU9 505 aa4.86□□□□□ -1.63
SNHG1-215ENST00000540904 NOTCH2NLQ7Z3S9 236 aa4.86□□□□□ -1.63
SNHG1-215ENST00000540904 A0A1B0GW54 56 aa4.85□□□□□ -1.63
SNHG1-215ENST00000540904 J3KT08 172 aa4.85□□□□□ -1.63
SNHG1-215ENST00000540904 A0A1B0GVX0 72 aa4.84□□□□□ -1.63
SNHG1-215ENST00000540904 KRTAP16-1A8MUX0 517 aa4.84□□□□□ -1.63
SNHG1-215ENST00000540904 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.63
SNHG1-215ENST00000540904 FAT4Q6V0I7 4981 aa4.83□□□□□ -1.64
SNHG1-215ENST00000540904 C8orf87E5RJ46 101 aa4.82□□□□□ -1.64
SNHG1-215ENST00000540904 F8W1H4 67 aa4.82□□□□□ -1.64
SNHG1-215ENST00000540904 NDUFB1O75438 58 aa4.82□□□□□ -1.64
SNHG1-215ENST00000540904 NREPQ16612 68 aa4.82□□□□□ -1.64
SNHG1-215ENST00000540904 A8MWP4 228 aa4.8□□□□□ -1.64
SNHG1-215ENST00000540904 K7ERU9 68 aa4.8□□□□□ -1.64
SNHG1-215ENST00000540904 COX6B2Q6YFQ2 88 aa4.8□□□□□ -1.64
SNHG1-215ENST00000540904 IGKV3D-7A0A0C4DH55 119 aa4.78□□□□□ -1.64
SNHG1-215ENST00000540904 J3QR89 54 aa4.78□□□□□ -1.64
SNHG1-215ENST00000540904 MT1HP80294 61 aa4.77□□□□□ -1.65
SNHG1-215ENST00000540904 C8orf17Q9NRJ1 99 aa4.77□□□□□ -1.65
SNHG1-215ENST00000540904 PRO0461Q9UI25 63 aa4.77□□□□□ -1.65
SNHG1-215ENST00000540904 PRR15Q8IV56 129 aa4.76□□□□□ -1.65
SNHG1-215ENST00000540904 BPY2O14599 106 aa4.74□□□□□ -1.65
SNHG1-215ENST00000540904 K7EQZ3 153 aa4.73□□□□□ -1.65
SNHG1-215ENST00000540904 M0R2T5 61 aa4.73□□□□□ -1.65
SNHG1-215ENST00000540904 Q6ZVQ6 151 aa4.73□□□□□ -1.65
SNHG1-215ENST00000540904 Q8N9P0 234 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-215ENST00000540904 KRTAP9-8Q9BYQ0 159 aa4.73□□□□□ -1.65
SNHG1-215ENST00000540904 ETDBQ3ZM63 59 aa4.72□□□□□ -1.65
SNHG1-215ENST00000540904 ZCCHC13Q8WW36 166 aaKnown RBP4.72□□□□□ -1.65
SNHG1-215ENST00000540904 MMP24-AS1A0A0U1RRL7 71 aa4.71□□□□□ -1.66
SNHG1-215ENST00000540904 UBL5Q9BZL1 73 aa4.7□□□□□ -1.66
SNHG1-215ENST00000540904 LINC00846Q9NV44 126 aa4.7□□□□□ -1.66
SNHG1-215ENST00000540904 hDV103S1A0JD37 113 aa4.69□□□□□ -1.66
SNHG1-215ENST00000540904 Q8N9L7 120 aa4.69□□□□□ -1.66
SNHG1-215ENST00000540904 TMEM254Q8TBM7 123 aa4.69□□□□□ -1.66
SNHG1-215ENST00000540904 MRPL34Q9BQ48 92 aaKnown RBP4.69□□□□□ -1.66
SNHG1-215ENST00000540904 NDUFS5O43920 106 aa4.68□□□□□ -1.66
SNHG1-215ENST00000540904 FAM236DA0A1B0GTK5 79 aa4.67□□□□□ -1.66
SNHG1-215ENST00000540904 FAM236CP0DP71 79 aa4.67□□□□□ -1.66
SNHG1-215ENST00000540904 HRES1P13985 223 aa4.67□□□□□ -1.66
SNHG1-215ENST00000540904 SPINK7P58062 85 aa4.67□□□□□ -1.66
SNHG1-215ENST00000540904 KRTAP10-6P60371 365 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-215ENST00000540904 RBM12B-AS1Q9P1G2 102 aa4.67□□□□□ -1.66
SNHG1-215ENST00000540904 CASC2Q6XLA1 102 aa4.65□□□□□ -1.67
SNHG1-215ENST00000540904 WFDC13Q8IUB5 93 aa4.65□□□□□ -1.67
SNHG1-215ENST00000540904 MPLKIPQ8TAP9 179 aa4.65□□□□□ -1.67
SNHG1-215ENST00000540904 HCG22E2RYF7 251 aa4.61□□□□□ -1.67
SNHG1-215ENST00000540904 ACYP1P07311 99 aa4.61□□□□□ -1.67
SNHG1-215ENST00000540904 FAM240AA0A1B0GVK7 77 aa4.6□□□□□ -1.67
SNHG1-215ENST00000540904 CXCL6P80162 114 aa4.59□□□□□ -1.67
SNHG1-215ENST00000540904 Q5W150 140 aa4.59□□□□□ -1.67
SNHG1-215ENST00000540904 IGKV2D-30A0A075B6S6 120 aa4.58□□□□□ -1.68
SNHG1-215ENST00000540904 IGKV2-30P06310 120 aa4.58□□□□□ -1.68
SNHG1-215ENST00000540904 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-215ENST00000540904 SCGB1A1P11684 91 aa4.57□□□□□ -1.68
SNHG1-215ENST00000540904 C7orf65Q6ZTY9 151 aa4.55□□□□□ -1.68
SNHG1-215ENST00000540904 PCP4P48539 62 aa4.53□□□□□ -1.68
SNHG1-215ENST00000540904 MT-ATP8P03928 68 aa4.51□□□□□ -1.69
SNHG1-215ENST00000540904 ATP5EP2Q5VTU8 51 aa4.51□□□□□ -1.69
SNHG1-215ENST00000540904 LINC00643Q86TS7 51 aa4.51□□□□□ -1.69
SNHG1-215ENST00000540904 TP53AIP1Q9HCN2 124 aa4.51□□□□□ -1.69
SNHG1-215ENST00000540904 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
SNHG1-215ENST00000540904 C4orf26Q17RF5 130 aa4.49□□□□□ -1.69
SNHG1-215ENST00000540904 H1FX-AS1Q4G0G2 97 aa4.49□□□□□ -1.69
SNHG1-215ENST00000540904 IMUPQ9GZP8 106 aa4.48□□□□□ -1.69
SNHG1-215ENST00000540904 MT2AP02795 61 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms