RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 C21orf62-AS1Q17RA5 79 aa9□□□□□ -0.97
CACNA2D4-211ENST00000540728 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
CACNA2D4-211ENST00000540728 Q6ZQT0 140 aa9□□□□□ -0.97
CACNA2D4-211ENST00000540728 IGKV4-1P06312 121 aa8.99□□□□□ -0.97
CACNA2D4-211ENST00000540728 C20orf166-AS1Q96NR2 134 aa8.99□□□□□ -0.97
CACNA2D4-211ENST00000540728 M0R2T5 61 aa8.98□□□□□ -0.97
CACNA2D4-211ENST00000540728 A8MUU9 505 aa8.97□□□□□ -0.97
CACNA2D4-211ENST00000540728 DSCR10P59022 87 aa8.97□□□□□ -0.97
CACNA2D4-211ENST00000540728 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
CACNA2D4-211ENST00000540728 LINC00313P59037 77 aa8.95□□□□□ -0.98
CACNA2D4-211ENST00000540728 FSIP2Q5CZC0 6907 aa8.95□□□□□ -0.98
CACNA2D4-211ENST00000540728 PRO0461Q9UI25 63 aa8.94□□□□□ -0.98
CACNA2D4-211ENST00000540728 A0A1B0GW54 56 aa8.93□□□□□ -0.98
CACNA2D4-211ENST00000540728 F8W1H4 67 aa8.92□□□□□ -0.98
CACNA2D4-211ENST00000540728 LINC00472Q9H8W2 130 aa8.92□□□□□ -0.98
CACNA2D4-211ENST00000540728 DEFB116Q30KQ4 102 aa8.91□□□□□ -0.98
CACNA2D4-211ENST00000540728 KRTAP10-6P60371 365 aaPredicted RBP8.9□□□□□ -0.98
CACNA2D4-211ENST00000540728 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
CACNA2D4-211ENST00000540728 IGHV6-1A0A0B4J1U7 121 aa8.87□□□□□ -0.99
CACNA2D4-211ENST00000540728 J3KT08 172 aa8.86□□□□□ -0.99
CACNA2D4-211ENST00000540728 NREPQ16612 68 aa8.86□□□□□ -0.99
CACNA2D4-211ENST00000540728 KRTAP16-1A8MUX0 517 aa8.84□□□□□ -0.99
CACNA2D4-211ENST00000540728 CRCT1Q9UGL9 99 aa8.84□□□□□ -0.99
CACNA2D4-211ENST00000540728 ETDBQ3ZM63 59 aa8.83□□□□□ -1
CACNA2D4-211ENST00000540728 NOTCH2NLQ7Z3S9 236 aa8.83□□□□□ -1
CACNA2D4-211ENST00000540728 A0A1B0GV90 55 aa8.82□□□□□ -1
CACNA2D4-211ENST00000540728 C8orf87E5RJ46 101 aa8.82□□□□□ -1
CACNA2D4-211ENST00000540728 A0A1B0GVX0 72 aa8.81□□□□□ -1
CACNA2D4-211ENST00000540728 NDUFB1O75438 58 aa8.81□□□□□ -1
CACNA2D4-211ENST00000540728 FLGP20930 4061 aaPredicted RBP8.8□□□□□ -1
CACNA2D4-211ENST00000540728 UBL5Q9BZL1 73 aa8.75□□□□□ -1.01
CACNA2D4-211ENST00000540728 A8MWP4 228 aa8.74□□□□□ -1.01
CACNA2D4-211ENST00000540728 Q6ZVQ6 151 aa8.74□□□□□ -1.01
CACNA2D4-211ENST00000540728 BPY2O14599 106 aa8.73□□□□□ -1.01
CACNA2D4-211ENST00000540728 FAM236DA0A1B0GTK5 79 aa8.72□□□□□ -1.01
CACNA2D4-211ENST00000540728 FAM236CP0DP71 79 aa8.72□□□□□ -1.01
CACNA2D4-211ENST00000540728 LINC00846Q9NV44 126 aa8.71□□□□□ -1.02
CACNA2D4-211ENST00000540728 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
CACNA2D4-211ENST00000540728 IGKV3D-7A0A0C4DH55 119 aa8.69□□□□□ -1.02
CACNA2D4-211ENST00000540728 PRR15Q8IV56 129 aa8.67□□□□□ -1.02
CACNA2D4-211ENST00000540728 ZCCHC13Q8WW36 166 aaKnown RBP8.66□□□□□ -1.02
CACNA2D4-211ENST00000540728 C8orf17Q9NRJ1 99 aa8.66□□□□□ -1.02
CACNA2D4-211ENST00000540728 K7EQZ3 153 aa8.65□□□□□ -1.02
CACNA2D4-211ENST00000540728 HRES1P13985 223 aa8.64□□□□□ -1.03
CACNA2D4-211ENST00000540728 Q8N9P0 234 aaPredicted RBP8.63□□□□□ -1.03
CACNA2D4-211ENST00000540728 ACYP1P07311 99 aa8.62□□□□□ -1.03
CACNA2D4-211ENST00000540728 MPLKIPQ8TAP9 179 aa8.62□□□□□ -1.03
CACNA2D4-211ENST00000540728 Q8N9L7 120 aa8.6□□□□□ -1.03
CACNA2D4-211ENST00000540728 MMP24-AS1A0A0U1RRL7 71 aa8.58□□□□□ -1.04
CACNA2D4-211ENST00000540728 FAM240AA0A1B0GVK7 77 aa8.58□□□□□ -1.04
CACNA2D4-211ENST00000540728 SPINK7P58062 85 aa8.58□□□□□ -1.04
CACNA2D4-211ENST00000540728 hDV103S1A0JD37 113 aa8.56□□□□□ -1.04
CACNA2D4-211ENST00000540728 TMEM254Q8TBM7 123 aa8.56□□□□□ -1.04
CACNA2D4-211ENST00000540728 J3QR89 54 aa8.54□□□□□ -1.04
CACNA2D4-211ENST00000540728 NDUFS5O43920 106 aa8.54□□□□□ -1.04
CACNA2D4-211ENST00000540728 CXCL6P80162 114 aa8.54□□□□□ -1.04
CACNA2D4-211ENST00000540728 WFDC13Q8IUB5 93 aa8.54□□□□□ -1.04
CACNA2D4-211ENST00000540728 MRPL34Q9BQ48 92 aaKnown RBP8.54□□□□□ -1.04
CACNA2D4-211ENST00000540728 CASC2Q6XLA1 102 aa8.52□□□□□ -1.05
CACNA2D4-211ENST00000540728 KRTAP9-8Q9BYQ0 159 aa8.52□□□□□ -1.05
CACNA2D4-211ENST00000540728 HCG22E2RYF7 251 aa8.49□□□□□ -1.05
CACNA2D4-211ENST00000540728 ATP5EP2Q5VTU8 51 aa8.49□□□□□ -1.05
CACNA2D4-211ENST00000540728 MT2AP02795 61 aa8.44□□□□□ -1.06
CACNA2D4-211ENST00000540728 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
CACNA2D4-211ENST00000540728 LINC00643Q86TS7 51 aa8.43□□□□□ -1.06
CACNA2D4-211ENST00000540728 USH2AO75445 5202 aa8.4□□□□□ -1.07
CACNA2D4-211ENST00000540728 MT1FP04733 61 aa8.38□□□□□ -1.07
CACNA2D4-211ENST00000540728 KRTAP10-10P60014 251 aa8.37□□□□□ -1.07
CACNA2D4-211ENST00000540728 SSPOA2VEC9 5147 aa8.37□□□□□ -1.07
CACNA2D4-211ENST00000540728 K7ERU9 68 aa8.36□□□□□ -1.07
CACNA2D4-211ENST00000540728 IGKV2D-30A0A075B6S6 120 aa8.33□□□□□ -1.08
CACNA2D4-211ENST00000540728 IGKV2-30P06310 120 aa8.33□□□□□ -1.08
CACNA2D4-211ENST00000540728 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
CACNA2D4-211ENST00000540728 TP53AIP1Q9HCN2 124 aa8.31□□□□□ -1.08
CACNA2D4-211ENST00000540728 Q5W150 140 aa8.3□□□□□ -1.08
CACNA2D4-211ENST00000540728 A0A087WVE0 104 aa8.29□□□□□ -1.08
CACNA2D4-211ENST00000540728 H1FX-AS1Q4G0G2 97 aa8.29□□□□□ -1.08
CACNA2D4-211ENST00000540728 KRTAP9-3Q9BYQ3 159 aa8.26□□□□□ -1.09
CACNA2D4-211ENST00000540728 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
CACNA2D4-211ENST00000540728 LCE2BO14633 110 aa8.25□□□□□ -1.09
CACNA2D4-211ENST00000540728 KRTAP19-1Q8IUB9 90 aa8.18□□□□□ -1.1
CACNA2D4-211ENST00000540728 TRAV22A0A0B4J277 110 aa8.17□□□□□ -1.1
CACNA2D4-211ENST00000540728 KRTAP9-7A8MTY7 169 aa8.17□□□□□ -1.1
CACNA2D4-211ENST00000540728 UQCRQO14949 82 aa8.16□□□□□ -1.1
CACNA2D4-211ENST00000540728 C4orf26Q17RF5 130 aa8.16□□□□□ -1.1
CACNA2D4-211ENST00000540728 FCGBPQ9Y6R7 5405 aaPredicted RBP8.15□□□□□ -1.1
CACNA2D4-211ENST00000540728 SCGB1A1P11684 91 aa8.15□□□□□ -1.1
CACNA2D4-211ENST00000540728 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
CACNA2D4-211ENST00000540728 IMUPQ9GZP8 106 aa8.12□□□□□ -1.11
CACNA2D4-211ENST00000540728 H0Y9P7 68 aa8.11□□□□□ -1.11
CACNA2D4-211ENST00000540728 ATOX1O00244 68 aa8.1□□□□□ -1.11
CACNA2D4-211ENST00000540728 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.11
CACNA2D4-211ENST00000540728 MP68P56378 58 aa8.06□□□□□ -1.12
CACNA2D4-211ENST00000540728 OCR1Q9BZK8 76 aa8.06□□□□□ -1.12
CACNA2D4-211ENST00000540728 CYP4F30PQ9H0H9 118 aa8.04□□□□□ -1.12
CACNA2D4-211ENST00000540728 C1orf64Q8NEQ6 169 aa8.03□□□□□ -1.12
CACNA2D4-211ENST00000540728 FAM236AA0A1B0GUQ0 79 aa8.02□□□□□ -1.13
CACNA2D4-211ENST00000540728 FAM236BA0A1B0GV22 79 aa8.02□□□□□ -1.13
CACNA2D4-211ENST00000540728 LINC00208Q96KT6 92 aa8.01□□□□□ -1.13
CACNA2D4-211ENST00000540728 C5orf47Q569G3 176 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms