RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
YBX3-207ENST00000539204 DHRS4-AS1Q9P1J3 65 aa6.19□□□□□ -1.42
YBX3-207ENST00000539204 CD164Q04900 197 aa6.18□□□□□ -1.42
YBX3-207ENST00000539204 ATP11AUNQ6ZP68 121 aa6.18□□□□□ -1.42
YBX3-207ENST00000539204 Q5XG85 94 aa6.17□□□□□ -1.42
YBX3-207ENST00000539204 SIGMAR1Q99720 223 aa6.17□□□□□ -1.42
YBX3-207ENST00000539204 LAMTOR3Q9UHA4 124 aa6.17□□□□□ -1.42
YBX3-207ENST00000539204 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
YBX3-207ENST00000539204 C21orf62-AS1Q17RA5 79 aa6.16□□□□□ -1.42
YBX3-207ENST00000539204 KRTAP19-6Q3LI70 58 aa6.16□□□□□ -1.42
YBX3-207ENST00000539204 NEBP20929 6669 aa6.15□□□□□ -1.42
YBX3-207ENST00000539204 MT1FP04733 61 aa6.15□□□□□ -1.42
YBX3-207ENST00000539204 CCKP06307 115 aa6.15□□□□□ -1.42
YBX3-207ENST00000539204 PDE6GP18545 87 aa6.15□□□□□ -1.42
YBX3-207ENST00000539204 SPRR1BP22528 89 aa6.15□□□□□ -1.42
YBX3-207ENST00000539204 LOC110117498A0A087WWA1 95 aa6.14□□□□□ -1.43
YBX3-207ENST00000539204 RBM3P98179 157 aaKnown RBP6.14□□□□□ -1.43
YBX3-207ENST00000539204 C14orf132Q9NPU4 83 aa6.14□□□□□ -1.43
YBX3-207ENST00000539204 SMIM29Q86T20 159 aa6.13□□□□□ -1.43
YBX3-207ENST00000539204 IGLV5-48A0A075B6I7 105 aa6.12□□□□□ -1.43
YBX3-207ENST00000539204 NDUFV3P56181 108 aaKnown RBP6.12□□□□□ -1.43
YBX3-207ENST00000539204 TRBV7-4A0A0J9YYF1 115 aa6.11□□□□□ -1.43
YBX3-207ENST00000539204 SCGB1A1P11684 91 aa6.11□□□□□ -1.43
YBX3-207ENST00000539204 Q6ZQT0 140 aa6.11□□□□□ -1.43
YBX3-207ENST00000539204 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
YBX3-207ENST00000539204 DSCR8Q96T75 97 aa6.09□□□□□ -1.43
YBX3-207ENST00000539204 MT-ATP8P03928 68 aa6.08□□□□□ -1.44
YBX3-207ENST00000539204 Q75L30 129 aa6.07□□□□□ -1.44
YBX3-207ENST00000539204 A0A1B0GW54 56 aa6.06□□□□□ -1.44
YBX3-207ENST00000539204 KRTAP20-1Q3LI63 56 aa6.06□□□□□ -1.44
YBX3-207ENST00000539204 IMUPQ9GZP8 106 aa6.06□□□□□ -1.44
YBX3-207ENST00000539204 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
YBX3-207ENST00000539204 TRBV7-7A0A0K0K1E9 115 aa6.05□□□□□ -1.44
YBX3-207ENST00000539204 DEFB105AQ8NG35 78 aa6.05□□□□□ -1.44
YBX3-207ENST00000539204 A0A1B0GV72 72 aa6.03□□□□□ -1.44
YBX3-207ENST00000539204 Q6JHZ5 121 aa6.03□□□□□ -1.44
YBX3-207ENST00000539204 A0A0G2JQZ4 141 aa6.02□□□□□ -1.45
YBX3-207ENST00000539204 ATP5EP2Q5VTU8 51 aa6.01□□□□□ -1.45
YBX3-207ENST00000539204 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
YBX3-207ENST00000539204 UBL5Q9BZL1 73 aa6.01□□□□□ -1.45
YBX3-207ENST00000539204 FAM236DA0A1B0GTK5 79 aa6□□□□□ -1.45
YBX3-207ENST00000539204 FAM236CP0DP71 79 aa6□□□□□ -1.45
YBX3-207ENST00000539204 PCP4P48539 62 aa6□□□□□ -1.45
YBX3-207ENST00000539204 F8WEM9 126 aa5.98□□□□□ -1.45
YBX3-207ENST00000539204 Q6ZVQ6 151 aa5.97□□□□□ -1.45
YBX3-207ENST00000539204 Q96NJ1 140 aa5.97□□□□□ -1.45
YBX3-207ENST00000539204 A0A1W2PNM2 257 aa5.96□□□□□ -1.46
YBX3-207ENST00000539204 CXCL6P80162 114 aa5.95□□□□□ -1.46
YBX3-207ENST00000539204 IGKV3D-7A0A0C4DH55 119 aa5.93□□□□□ -1.46
YBX3-207ENST00000539204 IGFL1Q6UW32 110 aa5.93□□□□□ -1.46
YBX3-207ENST00000539204 NREPQ16612 68 aa5.92□□□□□ -1.46
YBX3-207ENST00000539204 HIST1H4AP62805 103 aaKnown RBP5.91□□□□□ -1.46
YBX3-207ENST00000539204 RBM12B-AS1Q9P1G2 102 aa5.91□□□□□ -1.46
YBX3-207ENST00000539204 A8MUU9 505 aa5.89□□□□□ -1.47
YBX3-207ENST00000539204 FAM236AA0A1B0GUQ0 79 aa5.87□□□□□ -1.47
YBX3-207ENST00000539204 FAM236BA0A1B0GV22 79 aa5.87□□□□□ -1.47
YBX3-207ENST00000539204 ANAPC13Q9BS18 74 aa5.87□□□□□ -1.47
YBX3-207ENST00000539204 ATOX1O00244 68 aa5.85□□□□□ -1.47
YBX3-207ENST00000539204 BPY2O14599 106 aa5.85□□□□□ -1.47
YBX3-207ENST00000539204 MPLKIPQ8TAP9 179 aa5.85□□□□□ -1.47
YBX3-207ENST00000539204 A0A087WVE0 104 aa5.83□□□□□ -1.48
YBX3-207ENST00000539204 A0A087WSZ3 146 aa5.82□□□□□ -1.48
YBX3-207ENST00000539204 KRTAP16-1A8MUX0 517 aa5.82□□□□□ -1.48
YBX3-207ENST00000539204 IGKV4-1P06312 121 aa5.82□□□□□ -1.48
YBX3-207ENST00000539204 HRES1P13985 223 aa5.82□□□□□ -1.48
YBX3-207ENST00000539204 DSCR10P59022 87 aa5.8□□□□□ -1.48
YBX3-207ENST00000539204 SMIM20Q8N5G0 67 aa5.8□□□□□ -1.48
YBX3-207ENST00000539204 Q8N9P0 234 aaPredicted RBP5.8□□□□□ -1.48
YBX3-207ENST00000539204 LINC00472Q9H8W2 130 aa5.8□□□□□ -1.48
YBX3-207ENST00000539204 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
YBX3-207ENST00000539204 SS18L2Q9UHA2 77 aa5.79□□□□□ -1.48
YBX3-207ENST00000539204 A8MWP4 228 aa5.78□□□□□ -1.48
YBX3-207ENST00000539204 J3KT08 172 aa5.78□□□□□ -1.48
YBX3-207ENST00000539204 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
YBX3-207ENST00000539204 COX7CP15954 63 aa5.77□□□□□ -1.49
YBX3-207ENST00000539204 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
YBX3-207ENST00000539204 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
YBX3-207ENST00000539204 UQCRQO14949 82 aa5.76□□□□□ -1.49
YBX3-207ENST00000539204 NOTCH2NLQ7Z3S9 236 aa5.76□□□□□ -1.49
YBX3-207ENST00000539204 TRAV7A0A075B6U4 112 aa5.75□□□□□ -1.49
YBX3-207ENST00000539204 Q8N9L7 120 aa5.75□□□□□ -1.49
YBX3-207ENST00000539204 KMT2DO14686 5537 aa5.75□□□□□ -1.49
YBX3-207ENST00000539204 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
YBX3-207ENST00000539204 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
YBX3-207ENST00000539204 K7EQZ3 153 aa5.73□□□□□ -1.49
YBX3-207ENST00000539204 PRR15Q8IV56 129 aa5.73□□□□□ -1.49
YBX3-207ENST00000539204 CCDC179H3BU77 68 aa5.72□□□□□ -1.49
YBX3-207ENST00000539204 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
YBX3-207ENST00000539204 A6NN06 94 aa5.7□□□□□ -1.5
YBX3-207ENST00000539204 HCG22E2RYF7 251 aa5.7□□□□□ -1.5
YBX3-207ENST00000539204 NDUFB1O75438 58 aa5.7□□□□□ -1.5
YBX3-207ENST00000539204 DEFB116Q30KQ4 102 aa5.7□□□□□ -1.5
YBX3-207ENST00000539204 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
YBX3-207ENST00000539204 LINC00313P59037 77 aa5.67□□□□□ -1.5
YBX3-207ENST00000539204 A0A1B0GVX0 72 aa5.65□□□□□ -1.5
YBX3-207ENST00000539204 MMP24-AS1A0A0U1RRL7 71 aa5.64□□□□□ -1.51
YBX3-207ENST00000539204 CASC2Q6XLA1 102 aa5.64□□□□□ -1.51
YBX3-207ENST00000539204 KLKP1Q107X0 134 aa5.63□□□□□ -1.51
YBX3-207ENST00000539204 C8orf17Q9NRJ1 99 aa5.62□□□□□ -1.51
YBX3-207ENST00000539204 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms