RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 C4orf48Q5BLP8 95 aa7.34□□□□□ -1.23
CHFR-216ENST00000538235 UBL5Q9BZL1 73 aa7.33□□□□□ -1.24
CHFR-216ENST00000538235 MUC17Q685J3 4493 aa7.33□□□□□ -1.24
CHFR-216ENST00000538235 CD164Q04900 197 aa7.31□□□□□ -1.24
CHFR-216ENST00000538235 IGLV7-46A0A075B6I9 117 aa7.3□□□□□ -1.24
CHFR-216ENST00000538235 F8WEM9 126 aa7.3□□□□□ -1.24
CHFR-216ENST00000538235 KRTAP13-3Q3SY46 172 aa7.29□□□□□ -1.24
CHFR-216ENST00000538235 NDUFC1O43677 76 aa7.28□□□□□ -1.24
CHFR-216ENST00000538235 ATP5EP56381 51 aaPredicted RBP7.28□□□□□ -1.24
CHFR-216ENST00000538235 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
CHFR-216ENST00000538235 Q5XG85 94 aa7.27□□□□□ -1.25
CHFR-216ENST00000538235 A0A1W2PNM2 257 aa7.26□□□□□ -1.25
CHFR-216ENST00000538235 C1orf195Q5TG92 126 aa7.26□□□□□ -1.25
CHFR-216ENST00000538235 FP248Q71RG6 208 aaPredicted RBP7.26□□□□□ -1.25
CHFR-216ENST00000538235 C14orf132Q9NPU4 83 aa7.26□□□□□ -1.25
CHFR-216ENST00000538235 LINC00846Q9NV44 126 aa7.25□□□□□ -1.25
CHFR-216ENST00000538235 LIMD2Q9BT23 127 aa7.24□□□□□ -1.25
CHFR-216ENST00000538235 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
CHFR-216ENST00000538235 LOC110117498A0A087WWA1 95 aa7.23□□□□□ -1.25
CHFR-216ENST00000538235 CXCL6P80162 114 aa7.22□□□□□ -1.25
CHFR-216ENST00000538235 SERP1Q9Y6X1 66 aa7.22□□□□□ -1.25
CHFR-216ENST00000538235 IGKV3D-7A0A0C4DH55 119 aa7.21□□□□□ -1.26
CHFR-216ENST00000538235 RBM3P98179 157 aaKnown RBP7.21□□□□□ -1.26
CHFR-216ENST00000538235 TRBV7-4A0A0J9YYF1 115 aa7.2□□□□□ -1.26
CHFR-216ENST00000538235 Q96NJ1 140 aa7.2□□□□□ -1.26
CHFR-216ENST00000538235 DSCR8Q96T75 97 aa7.19□□□□□ -1.26
CHFR-216ENST00000538235 A0A087WSZ3 146 aa7.18□□□□□ -1.26
CHFR-216ENST00000538235 FAM236DA0A1B0GTK5 79 aa7.18□□□□□ -1.26
CHFR-216ENST00000538235 FAM236CP0DP71 79 aa7.18□□□□□ -1.26
CHFR-216ENST00000538235 ASB16-AS1Q495Z4 193 aa7.18□□□□□ -1.26
CHFR-216ENST00000538235 A0A1B0GW54 56 aa7.17□□□□□ -1.26
CHFR-216ENST00000538235 KLKP1Q107X0 134 aa7.17□□□□□ -1.26
CHFR-216ENST00000538235 XP32Q5T750 250 aa7.17□□□□□ -1.26
CHFR-216ENST00000538235 C9orf92A6NGG3 77 aa7.16□□□□□ -1.26
CHFR-216ENST00000538235 MUC2Q02817 5179 aa7.15□□□□□ -1.26
CHFR-216ENST00000538235 SMIM26A0A096LP01 95 aa7.14□□□□□ -1.27
CHFR-216ENST00000538235 KRTAP4-1Q9BYQ7 146 aa7.14□□□□□ -1.27
CHFR-216ENST00000538235 Q6ZQT0 140 aa7.13□□□□□ -1.27
CHFR-216ENST00000538235 A0A087WVE0 104 aa7.1□□□□□ -1.27
CHFR-216ENST00000538235 C20orf197Q8N268 126 aa7.1□□□□□ -1.27
CHFR-216ENST00000538235 PRO0628Q9UI54 55 aa7.09□□□□□ -1.27
CHFR-216ENST00000538235 DEFB116Q30KQ4 102 aa7.07□□□□□ -1.28
CHFR-216ENST00000538235 Q6ZVQ6 151 aa7.07□□□□□ -1.28
CHFR-216ENST00000538235 LINC00472Q9H8W2 130 aa7.07□□□□□ -1.28
CHFR-216ENST00000538235 H7BZZ5 65 aa7.05□□□□□ -1.28
CHFR-216ENST00000538235 NOTCH2NLQ7Z3S9 236 aa7.03□□□□□ -1.28
CHFR-216ENST00000538235 DSCR10P59022 87 aa7.01□□□□□ -1.29
CHFR-216ENST00000538235 FAT4Q6V0I7 4981 aa7□□□□□ -1.29
CHFR-216ENST00000538235 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
CHFR-216ENST00000538235 IGKV4-1P06312 121 aa7□□□□□ -1.29
CHFR-216ENST00000538235 RPL37P61927 97 aaKnown RBP7□□□□□ -1.29
CHFR-216ENST00000538235 PCOTHQ58A44 107 aa7□□□□□ -1.29
CHFR-216ENST00000538235 CYSTM1Q9H1C7 97 aa6.99□□□□□ -1.29
CHFR-216ENST00000538235 BPY2O14599 106 aa6.98□□□□□ -1.29
CHFR-216ENST00000538235 NREPQ16612 68 aa6.98□□□□□ -1.29
CHFR-216ENST00000538235 C4orf26Q17RF5 130 aa6.98□□□□□ -1.29
CHFR-216ENST00000538235 LCE2CQ5TA81 110 aa6.98□□□□□ -1.29
CHFR-216ENST00000538235 TMEM254Q8TBM7 123 aa6.97□□□□□ -1.29
CHFR-216ENST00000538235 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
CHFR-216ENST00000538235 KRTAP19-2Q3LHN2 52 aa6.93□□□□□ -1.3
CHFR-216ENST00000538235 A8MUU9 505 aa6.92□□□□□ -1.3
CHFR-216ENST00000538235 NDUFB1O75438 58 aa6.92□□□□□ -1.3
CHFR-216ENST00000538235 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
CHFR-216ENST00000538235 V9GYY9 64 aa6.92□□□□□ -1.3
CHFR-216ENST00000538235 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
CHFR-216ENST00000538235 A0A1B0GVX0 72 aa6.91□□□□□ -1.3
CHFR-216ENST00000538235 Q75L30 129 aa6.91□□□□□ -1.3
CHFR-216ENST00000538235 A0A0U1RQV1 116 aa6.89□□□□□ -1.31
CHFR-216ENST00000538235 SNURFQ9Y675 71 aa6.89□□□□□ -1.31
CHFR-216ENST00000538235 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
CHFR-216ENST00000538235 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
CHFR-216ENST00000538235 LINC00313P59037 77 aa6.87□□□□□ -1.31
CHFR-216ENST00000538235 A8MWP4 228 aa6.86□□□□□ -1.31
CHFR-216ENST00000538235 K7EQZ3 153 aa6.85□□□□□ -1.31
CHFR-216ENST00000538235 H3BPC8 53 aa6.84□□□□□ -1.31
CHFR-216ENST00000538235 MMP24-AS1A0A0U1RRL7 71 aa6.83□□□□□ -1.32
CHFR-216ENST00000538235 C8orf17Q9NRJ1 99 aa6.83□□□□□ -1.32
CHFR-216ENST00000538235 C8orf87E5RJ46 101 aa6.82□□□□□ -1.32
CHFR-216ENST00000538235 Q1T7F1 81 aa6.82□□□□□ -1.32
CHFR-216ENST00000538235 Q8N9L7 120 aa6.82□□□□□ -1.32
CHFR-216ENST00000538235 PRR15Q8IV56 129 aa6.81□□□□□ -1.32
CHFR-216ENST00000538235 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
CHFR-216ENST00000538235 CYP4F30PQ9H0H9 118 aa6.8□□□□□ -1.32
CHFR-216ENST00000538235 MP68P56378 58 aa6.79□□□□□ -1.32
CHFR-216ENST00000538235 FLGP20930 4061 aaPredicted RBP6.79□□□□□ -1.32
CHFR-216ENST00000538235 hDV103S1A0JD37 113 aa6.77□□□□□ -1.33
CHFR-216ENST00000538235 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
CHFR-216ENST00000538235 ATP11AUNQ6ZP68 121 aa6.76□□□□□ -1.33
CHFR-216ENST00000538235 HCG22E2RYF7 251 aa6.74□□□□□ -1.33
CHFR-216ENST00000538235 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
CHFR-216ENST00000538235 MT1HP80294 61 aa6.72□□□□□ -1.33
CHFR-216ENST00000538235 ZCCHC13Q8WW36 166 aaKnown RBP6.72□□□□□ -1.33
CHFR-216ENST00000538235 MPLKIPQ8TAP9 179 aa6.71□□□□□ -1.34
CHFR-216ENST00000538235 WFDC13Q8IUB5 93 aa6.7□□□□□ -1.34
CHFR-216ENST00000538235 MRPL34Q9BQ48 92 aaKnown RBP6.7□□□□□ -1.34
CHFR-216ENST00000538235 HRES1P13985 223 aa6.69□□□□□ -1.34
CHFR-216ENST00000538235 C1orf64Q8NEQ6 169 aa6.67□□□□□ -1.34
CHFR-216ENST00000538235 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
CHFR-216ENST00000538235 PMAIP1Q13794 54 aa6.65□□□□□ -1.34
CHFR-216ENST00000538235 Q5W150 140 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms