RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 TEX49A0A1B0GTD5 131 aa7.34□□□□□ -1.23
LPCAT3-206ENST00000537179 MYMXA0A1B0GTQ4 84 aa7.34□□□□□ -1.23
LPCAT3-206ENST00000537179 KRTAP5-9P26371 169 aa7.33□□□□□ -1.24
LPCAT3-206ENST00000537179 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
LPCAT3-206ENST00000537179 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
LPCAT3-206ENST00000537179 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
LPCAT3-206ENST00000537179 A8MUU9 505 aa7.31□□□□□ -1.24
LPCAT3-206ENST00000537179 K7ERJ3 54 aa7.31□□□□□ -1.24
LPCAT3-206ENST00000537179 COX7CP15954 63 aa7.31□□□□□ -1.24
LPCAT3-206ENST00000537179 IGFL1Q6UW32 110 aa7.31□□□□□ -1.24
LPCAT3-206ENST00000537179 ACYP1P07311 99 aa7.3□□□□□ -1.24
LPCAT3-206ENST00000537179 ANKRD29Q8N6D5 301 aa7.3□□□□□ -1.24
LPCAT3-206ENST00000537179 IFI27L1Q96BM0 104 aa7.3□□□□□ -1.24
LPCAT3-206ENST00000537179 RBM12B-AS1Q9P1G2 102 aa7.3□□□□□ -1.24
LPCAT3-206ENST00000537179 EIF4EBP3O60516 100 aaPredicted RBP7.29□□□□□ -1.24
LPCAT3-206ENST00000537179 HRES1P13985 223 aa7.29□□□□□ -1.24
LPCAT3-206ENST00000537179 TSPEAR-AS2P59090 65 aa7.29□□□□□ -1.24
LPCAT3-206ENST00000537179 SOSTDC1Q6X4U4 206 aa7.29□□□□□ -1.24
LPCAT3-206ENST00000537179 TRACP01848 142 aa7.28□□□□□ -1.24
LPCAT3-206ENST00000537179 ELOF1P60002 83 aaKnown RBP7.28□□□□□ -1.24
LPCAT3-206ENST00000537179 PSMB2P49721 201 aa7.27□□□□□ -1.25
LPCAT3-206ENST00000537179 NPC2P61916 151 aa7.27□□□□□ -1.25
LPCAT3-206ENST00000537179 KRTAP16-1A8MUX0 517 aa7.26□□□□□ -1.25
LPCAT3-206ENST00000537179 DPM2O94777 84 aa7.26□□□□□ -1.25
LPCAT3-206ENST00000537179 IGLV5-48A0A075B6I7 105 aa7.25□□□□□ -1.25
LPCAT3-206ENST00000537179 COX7BP24311 80 aa7.25□□□□□ -1.25
LPCAT3-206ENST00000537179 HIST1H4GQ99525 98 aa7.25□□□□□ -1.25
LPCAT3-206ENST00000537179 ATOX1O00244 68 aa7.24□□□□□ -1.25
LPCAT3-206ENST00000537179 IGKCP01834 107 aa7.24□□□□□ -1.25
LPCAT3-206ENST00000537179 C4orf26Q17RF5 130 aa7.24□□□□□ -1.25
LPCAT3-206ENST00000537179 TRAV12-1A0A0B4J245 112 aa7.22□□□□□ -1.25
LPCAT3-206ENST00000537179 A8MWP4 228 aa7.21□□□□□ -1.26
LPCAT3-206ENST00000537179 H3BT86 120 aa7.21□□□□□ -1.26
LPCAT3-206ENST00000537179 LINC00643Q86TS7 51 aa7.21□□□□□ -1.26
LPCAT3-206ENST00000537179 FAM236AA0A1B0GUQ0 79 aa7.2□□□□□ -1.26
LPCAT3-206ENST00000537179 FAM236BA0A1B0GV22 79 aa7.2□□□□□ -1.26
LPCAT3-206ENST00000537179 A6NN06 94 aa7.2□□□□□ -1.26
LPCAT3-206ENST00000537179 J3QQQ9 107 aa7.2□□□□□ -1.26
LPCAT3-206ENST00000537179 HIST1H4AP62805 103 aaKnown RBP7.2□□□□□ -1.26
LPCAT3-206ENST00000537179 LEPROTO15243 131 aa7.18□□□□□ -1.26
LPCAT3-206ENST00000537179 COPS9Q8WXC6 57 aa7.18□□□□□ -1.26
LPCAT3-206ENST00000537179 PLNP26678 52 aa7.17□□□□□ -1.26
LPCAT3-206ENST00000537179 ATXN8Q156A1 80 aa7.17□□□□□ -1.26
LPCAT3-206ENST00000537179 ADAMTSL4-AS1Q5T5F5 129 aa7.17□□□□□ -1.26
LPCAT3-206ENST00000537179 GPR98Q8WXG9 6306 aa7.16□□□□□ -1.26
LPCAT3-206ENST00000537179 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.26
LPCAT3-206ENST00000537179 SERP1Q9Y6X1 66 aa7.15□□□□□ -1.26
LPCAT3-206ENST00000537179 PRO1854Q9UHT4 67 aa7.14□□□□□ -1.27
LPCAT3-206ENST00000537179 SMIM26A0A096LP01 95 aa7.13□□□□□ -1.27
LPCAT3-206ENST00000537179 SERP2Q8N6R1 65 aa7.13□□□□□ -1.27
LPCAT3-206ENST00000537179 A0A0B4J2C4 111 aa7.12□□□□□ -1.27
LPCAT3-206ENST00000537179 F8WEM9 126 aa7.12□□□□□ -1.27
LPCAT3-206ENST00000537179 LST1O00453 97 aa7.12□□□□□ -1.27
LPCAT3-206ENST00000537179 CLEC2BQ92478 149 aa7.12□□□□□ -1.27
LPCAT3-206ENST00000537179 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
LPCAT3-206ENST00000537179 A0A0J9YXY3 114 aa7.1□□□□□ -1.27
LPCAT3-206ENST00000537179 hADV29S1A0JD25 119 aa7.1□□□□□ -1.27
LPCAT3-206ENST00000537179 KRTAP2-2Q9BYT5 123 aa7.09□□□□□ -1.27
LPCAT3-206ENST00000537179 KRTAP2-1Q9BYU5 128 aa7.09□□□□□ -1.27
LPCAT3-206ENST00000537179 TTTY13Q9BZ97 58 aa7.09□□□□□ -1.27
LPCAT3-206ENST00000537179 DSCR10P59022 87 aa7.08□□□□□ -1.28
LPCAT3-206ENST00000537179 Q6JHZ5 121 aa7.08□□□□□ -1.28
LPCAT3-206ENST00000537179 LINC00308Q8TCZ7 52 aa7.08□□□□□ -1.28
LPCAT3-206ENST00000537179 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
LPCAT3-206ENST00000537179 HERVK_113P61574 105 aa7.06□□□□□ -1.28
LPCAT3-206ENST00000537179 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
LPCAT3-206ENST00000537179 DSCR8Q96T75 97 aa7.05□□□□□ -1.28
LPCAT3-206ENST00000537179 PMAIP1Q13794 54 aa7.04□□□□□ -1.28
LPCAT3-206ENST00000537179 LITAFQ99732 161 aa7.04□□□□□ -1.28
LPCAT3-206ENST00000537179 ATP5EP56381 51 aaPredicted RBP7.03□□□□□ -1.28
LPCAT3-206ENST00000537179 ZNF815PA8K554 130 aa7.02□□□□□ -1.29
LPCAT3-206ENST00000537179 GHRHP01286 108 aa7.02□□□□□ -1.29
LPCAT3-206ENST00000537179 COX6CP09669 75 aa7.02□□□□□ -1.29
LPCAT3-206ENST00000537179 SPRR2EP22531 72 aa7.01□□□□□ -1.29
LPCAT3-206ENST00000537179 SPRR2BP35325 72 aa7.01□□□□□ -1.29
LPCAT3-206ENST00000537179 SPRR2AP35326 72 aa7.01□□□□□ -1.29
LPCAT3-206ENST00000537179 SCGB1D4Q6XE38 83 aa7.01□□□□□ -1.29
LPCAT3-206ENST00000537179 MT1BP07438 61 aa6.99□□□□□ -1.29
LPCAT3-206ENST00000537179 PRR15Q8IV56 129 aa6.99□□□□□ -1.29
LPCAT3-206ENST00000537179 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
LPCAT3-206ENST00000537179 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
LPCAT3-206ENST00000537179 CYSTM1Q9H1C7 97 aa6.96□□□□□ -1.3
LPCAT3-206ENST00000537179 NDUFC1O43677 76 aa6.95□□□□□ -1.3
LPCAT3-206ENST00000537179 TIMM17BO60830 172 aa6.93□□□□□ -1.3
LPCAT3-206ENST00000537179 TRIAP1O43715 76 aa6.92□□□□□ -1.3
LPCAT3-206ENST00000537179 BRK1Q8WUW1 75 aa6.92□□□□□ -1.3
LPCAT3-206ENST00000537179 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
LPCAT3-206ENST00000537179 LINC00313P59037 77 aa6.91□□□□□ -1.3
LPCAT3-206ENST00000537179 ATP5EP2Q5VTU8 51 aa6.91□□□□□ -1.3
LPCAT3-206ENST00000537179 Q6ZQY7 126 aa6.91□□□□□ -1.3
LPCAT3-206ENST00000537179 KLKP1Q107X0 134 aa6.89□□□□□ -1.31
LPCAT3-206ENST00000537179 Q5VV11 94 aa6.89□□□□□ -1.31
LPCAT3-206ENST00000537179 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
LPCAT3-206ENST00000537179 A0A1W2PNM2 257 aa6.87□□□□□ -1.31
LPCAT3-206ENST00000537179 H7BZZ5 65 aa6.87□□□□□ -1.31
LPCAT3-206ENST00000537179 SPINK7P58062 85 aa6.87□□□□□ -1.31
LPCAT3-206ENST00000537179 MUSTN1Q8IVN3 82 aa6.86□□□□□ -1.31
LPCAT3-206ENST00000537179 SMIM11BQ8TCY0 68 aa6.86□□□□□ -1.31
LPCAT3-206ENST00000537179 TRAV7A0A075B6U4 112 aa6.85□□□□□ -1.31
LPCAT3-206ENST00000537179 A0A087WSZ3 146 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms