RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 FSIP2Q5CZC0 6907 aa9.69□□□□□ -0.86
CCDC61-201ENST00000536603 LINC00472Q9H8W2 130 aa9.69□□□□□ -0.86
CCDC61-201ENST00000536603 PCOTHQ58A44 107 aa9.68□□□□□ -0.86
CCDC61-201ENST00000536603 DEFB116Q30KQ4 102 aa9.67□□□□□ -0.86
CCDC61-201ENST00000536603 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
CCDC61-201ENST00000536603 J3QR89 54 aa9.64□□□□□ -0.87
CCDC61-201ENST00000536603 RPL37P61927 97 aaKnown RBP9.64□□□□□ -0.87
CCDC61-201ENST00000536603 SIGMAR1Q99720 223 aa9.61□□□□□ -0.87
CCDC61-201ENST00000536603 IGKV4-1P06312 121 aa9.6□□□□□ -0.87
CCDC61-201ENST00000536603 NREPQ16612 68 aa9.6□□□□□ -0.87
CCDC61-201ENST00000536603 Q6ZVQ6 151 aa9.59□□□□□ -0.87
CCDC61-201ENST00000536603 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
CCDC61-201ENST00000536603 DSCR10P59022 87 aa9.55□□□□□ -0.88
CCDC61-201ENST00000536603 FAM240AA0A1B0GVK7 77 aa9.54□□□□□ -0.88
CCDC61-201ENST00000536603 K7ERU9 68 aa9.54□□□□□ -0.88
CCDC61-201ENST00000536603 Q75L30 129 aa9.54□□□□□ -0.88
CCDC61-201ENST00000536603 MT1HP80294 61 aa9.52□□□□□ -0.89
CCDC61-201ENST00000536603 J3KT08 172 aa9.51□□□□□ -0.89
CCDC61-201ENST00000536603 ACYP1P07311 99 aa9.51□□□□□ -0.89
CCDC61-201ENST00000536603 LINC00313P59037 77 aa9.51□□□□□ -0.89
CCDC61-201ENST00000536603 ATP11AUNQ6ZP68 121 aa9.51□□□□□ -0.89
CCDC61-201ENST00000536603 UBL5Q9BZL1 73 aa9.51□□□□□ -0.89
CCDC61-201ENST00000536603 NOTCH2NLQ7Z3S9 236 aa9.5□□□□□ -0.89
CCDC61-201ENST00000536603 IGKV3D-7A0A0C4DH55 119 aa9.49□□□□□ -0.89
CCDC61-201ENST00000536603 C20orf166-AS1Q96NR2 134 aa9.49□□□□□ -0.89
CCDC61-201ENST00000536603 BPY2O14599 106 aa9.48□□□□□ -0.89
CCDC61-201ENST00000536603 KRTAP19-2Q3LHN2 52 aa9.48□□□□□ -0.89
CCDC61-201ENST00000536603 IGHV6-1A0A0B4J1U7 121 aa9.47□□□□□ -0.89
CCDC61-201ENST00000536603 A0A1B0GVX0 72 aa9.47□□□□□ -0.89
CCDC61-201ENST00000536603 A8MUU9 505 aa9.47□□□□□ -0.89
CCDC61-201ENST00000536603 A8MWP4 228 aa9.47□□□□□ -0.89
CCDC61-201ENST00000536603 Q8N9L7 120 aa9.45□□□□□ -0.9
CCDC61-201ENST00000536603 K7EQZ3 153 aa9.44□□□□□ -0.9
CCDC61-201ENST00000536603 M0R2T5 61 aa9.44□□□□□ -0.9
CCDC61-201ENST00000536603 PRR15Q8IV56 129 aa9.44□□□□□ -0.9
CCDC61-201ENST00000536603 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
CCDC61-201ENST00000536603 NDUFB1O75438 58 aa9.41□□□□□ -0.9
CCDC61-201ENST00000536603 KRTAP10-6P60371 365 aaPredicted RBP9.4□□□□□ -0.9
CCDC61-201ENST00000536603 C8orf87E5RJ46 101 aa9.39□□□□□ -0.91
CCDC61-201ENST00000536603 LORP23490 312 aaPredicted RBP9.39□□□□□ -0.91
CCDC61-201ENST00000536603 C8orf17Q9NRJ1 99 aa9.39□□□□□ -0.91
CCDC61-201ENST00000536603 CXCL6P80162 114 aa9.38□□□□□ -0.91
CCDC61-201ENST00000536603 COX6B2Q6YFQ2 88 aa9.38□□□□□ -0.91
CCDC61-201ENST00000536603 MMP24-AS1A0A0U1RRL7 71 aa9.36□□□□□ -0.91
CCDC61-201ENST00000536603 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
CCDC61-201ENST00000536603 ATP5EP2Q5VTU8 51 aa9.31□□□□□ -0.92
CCDC61-201ENST00000536603 hDV103S1A0JD37 113 aa9.26□□□□□ -0.93
CCDC61-201ENST00000536603 WFDC13Q8IUB5 93 aa9.26□□□□□ -0.93
CCDC61-201ENST00000536603 TMEM254Q8TBM7 123 aa9.25□□□□□ -0.93
CCDC61-201ENST00000536603 HCG22E2RYF7 251 aa9.24□□□□□ -0.93
CCDC61-201ENST00000536603 Q8N9P0 234 aaPredicted RBP9.24□□□□□ -0.93
CCDC61-201ENST00000536603 CASC2Q6XLA1 102 aa9.23□□□□□ -0.93
CCDC61-201ENST00000536603 MRPL34Q9BQ48 92 aaKnown RBP9.23□□□□□ -0.93
CCDC61-201ENST00000536603 A0A087WVE0 104 aa9.22□□□□□ -0.93
CCDC61-201ENST00000536603 HIST1H4AP62805 103 aaKnown RBP9.22□□□□□ -0.93
CCDC61-201ENST00000536603 MT-ATP8P03928 68 aa9.21□□□□□ -0.94
CCDC61-201ENST00000536603 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
CCDC61-201ENST00000536603 FLGP20930 4061 aaPredicted RBP9.13□□□□□ -0.95
CCDC61-201ENST00000536603 NDUFS5O43920 106 aa9.12□□□□□ -0.95
CCDC61-201ENST00000536603 KRTAP9-7A8MTY7 169 aa9.1□□□□□ -0.95
CCDC61-201ENST00000536603 HRES1P13985 223 aa9.1□□□□□ -0.95
CCDC61-201ENST00000536603 IMUPQ9GZP8 106 aa9.1□□□□□ -0.95
CCDC61-201ENST00000536603 Q5W150 140 aa9.09□□□□□ -0.95
CCDC61-201ENST00000536603 SPINK7P58062 85 aa9.08□□□□□ -0.96
CCDC61-201ENST00000536603 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.07□□□□□ -0.96
CCDC61-201ENST00000536603 FAM236DA0A1B0GTK5 79 aa9.06□□□□□ -0.96
CCDC61-201ENST00000536603 FAM236CP0DP71 79 aa9.06□□□□□ -0.96
CCDC61-201ENST00000536603 MPLKIPQ8TAP9 179 aa9.06□□□□□ -0.96
CCDC61-201ENST00000536603 RBM12B-AS1Q9P1G2 102 aa9.06□□□□□ -0.96
CCDC61-201ENST00000536603 TP53AIP1Q9HCN2 124 aa8.98□□□□□ -0.97
CCDC61-201ENST00000536603 OCR1Q9BZK8 76 aa8.96□□□□□ -0.98
CCDC61-201ENST00000536603 FAM236AA0A1B0GUQ0 79 aa8.95□□□□□ -0.98
CCDC61-201ENST00000536603 FAM236BA0A1B0GV22 79 aa8.95□□□□□ -0.98
CCDC61-201ENST00000536603 SCGB1A1P11684 91 aa8.92□□□□□ -0.98
CCDC61-201ENST00000536603 KRTAP9-8Q9BYQ0 159 aa8.92□□□□□ -0.98
CCDC61-201ENST00000536603 UQCRQO14949 82 aa8.91□□□□□ -0.98
CCDC61-201ENST00000536603 IGKV2D-30A0A075B6S6 120 aa8.89□□□□□ -0.99
CCDC61-201ENST00000536603 IGKV2-30P06310 120 aa8.89□□□□□ -0.99
CCDC61-201ENST00000536603 USH2AO75445 5202 aa8.88□□□□□ -0.99
CCDC61-201ENST00000536603 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
CCDC61-201ENST00000536603 SSPOA2VEC9 5147 aa8.87□□□□□ -0.99
CCDC61-201ENST00000536603 ATOX1O00244 68 aa8.85□□□□□ -0.99
CCDC61-201ENST00000536603 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
CCDC61-201ENST00000536603 H0Y9P7 68 aa8.84□□□□□ -0.99
CCDC61-201ENST00000536603 SMIM20Q8N5G0 67 aa8.84□□□□□ -0.99
CCDC61-201ENST00000536603 TRAV7A0A075B6U4 112 aa8.78□□□□□ -1
CCDC61-201ENST00000536603 MT2AP02795 61 aa8.78□□□□□ -1
CCDC61-201ENST00000536603 CYP4F30PQ9H0H9 118 aa8.78□□□□□ -1
CCDC61-201ENST00000536603 KRTAP19-1Q8IUB9 90 aa8.77□□□□□ -1.01
CCDC61-201ENST00000536603 C5orf47Q569G3 176 aa8.76□□□□□ -1.01
CCDC61-201ENST00000536603 C1orf64Q8NEQ6 169 aa8.76□□□□□ -1.01
CCDC61-201ENST00000536603 LINC00208Q96KT6 92 aa8.76□□□□□ -1.01
CCDC61-201ENST00000536603 LOC101927531A0A1B0GV80 90 aa8.75□□□□□ -1.01
CCDC61-201ENST00000536603 FCGBPQ9Y6R7 5405 aaPredicted RBP8.75□□□□□ -1.01
CCDC61-201ENST00000536603 MP68P56378 58 aa8.74□□□□□ -1.01
CCDC61-201ENST00000536603 ANAPC13Q9BS18 74 aa8.74□□□□□ -1.01
CCDC61-201ENST00000536603 H1FX-AS1Q4G0G2 97 aa8.73□□□□□ -1.01
CCDC61-201ENST00000536603 LCE2BO14633 110 aa8.72□□□□□ -1.01
CCDC61-201ENST00000536603 KRTAP10-10P60014 251 aa8.72□□□□□ -1.01
CCDC61-201ENST00000536603 C4orf26Q17RF5 130 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms