RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 LELP1Q5T871 98 aa2.32□□□□□ -2.04
MCF2-210ENST00000536274 LYSTQ99698 3801 aa2.32□□□□□ -2.04
MCF2-210ENST00000536274 C16orf74Q96GX8 76 aa2.31□□□□□ -2.04
MCF2-210ENST00000536274 IGLV5-37A0A075B6J1 123 aa2.31□□□□□ -2.04
MCF2-210ENST00000536274 H0Y9J4 135 aa2.31□□□□□ -2.04
MCF2-210ENST00000536274 IGFL1Q6UW32 110 aa2.31□□□□□ -2.04
MCF2-210ENST00000536274 MGAM2Q2M2H8 2515 aa2.3□□□□□ -2.04
MCF2-210ENST00000536274 CASC10Q5T4H9 136 aa2.3□□□□□ -2.04
MCF2-210ENST00000536274 H3BQ85 93 aa2.3□□□□□ -2.04
MCF2-210ENST00000536274 SPRR4Q96PI1 79 aa2.3□□□□□ -2.04
MCF2-210ENST00000536274 KMT2CQ8NEZ4 4911 aaKnown RBP2.3□□□□□ -2.04
MCF2-210ENST00000536274 C4orf3Q8WVX3 66 aa2.3□□□□□ -2.04
MCF2-210ENST00000536274 HUWE1Q7Z6Z7 4374 aaKnown RBP2.3□□□□□ -2.04
MCF2-210ENST00000536274 P0C880 135 aa2.29□□□□□ -2.04
MCF2-210ENST00000536274 HERC2O95714 4834 aa2.29□□□□□ -2.04
MCF2-210ENST00000536274 TENM1Q9UKZ4 2725 aa2.29□□□□□ -2.04
MCF2-210ENST00000536274 KRTAP10-11P60412 298 aa2.29□□□□□ -2.04
MCF2-210ENST00000536274 PRLHP81277 87 aa2.29□□□□□ -2.04
MCF2-210ENST00000536274 DNAH17Q9UFH2 4485 aa2.28□□□□□ -2.04
MCF2-210ENST00000536274 Q6ZRX8 168 aa2.28□□□□□ -2.04
MCF2-210ENST00000536274 PRO0255Q9UI72 69 aa2.28□□□□□ -2.04
MCF2-210ENST00000536274 PLECQ15149 4684 aaKnown RBP2.28□□□□□ -2.04
MCF2-210ENST00000536274 ROMO1P60602 79 aa2.28□□□□□ -2.04
MCF2-210ENST00000536274 DNAH10OSP0CZ25 163 aa2.27□□□□□ -2.05
MCF2-210ENST00000536274 DNAH10Q8IVF4 4471 aa2.27□□□□□ -2.05
MCF2-210ENST00000536274 IGKV2-24A0A0C4DH68 120 aa2.27□□□□□ -2.05
MCF2-210ENST00000536274 REG3GQ6UW15 175 aa2.27□□□□□ -2.05
MCF2-210ENST00000536274 KRTAP7-1Q8IUC3 87 aa2.27□□□□□ -2.05
MCF2-210ENST00000536274 C15orf56Q8N910 161 aa2.27□□□□□ -2.05
MCF2-210ENST00000536274 KRTAP3-1Q9BYR8 98 aa2.27□□□□□ -2.05
MCF2-210ENST00000536274 MIR22HGQ0VDD5 57 aa2.27□□□□□ -2.05
MCF2-210ENST00000536274 HECTD4Q9Y4D8 3996 aa2.26□□□□□ -2.05
MCF2-210ENST00000536274 MMP24-AS1A0A0U1RRL7 71 aa2.26□□□□□ -2.05
MCF2-210ENST00000536274 A0A087X002 238 aa2.26□□□□□ -2.05
MCF2-210ENST00000536274 DEFB135Q30KP9 77 aa2.26□□□□□ -2.05
MCF2-210ENST00000536274 NOTCH2NLQ7Z3S9 236 aa2.26□□□□□ -2.05
MCF2-210ENST00000536274 DYNC1H1Q14204 4646 aaKnown RBP2.26□□□□□ -2.05
MCF2-210ENST00000536274 GVQW2A0A096LPI5 108 aaPredicted RBP2.26□□□□□ -2.05
MCF2-210ENST00000536274 A0A1B0GU69 56 aa2.26□□□□□ -2.05
MCF2-210ENST00000536274 KRTAP4-16G5E9R7 235 aaPredicted RBP2.26□□□□□ -2.05
MCF2-210ENST00000536274 KRTAP10-2P60368 255 aa2.26□□□□□ -2.05
MCF2-210ENST00000536274 NUPR2A6NF83 97 aa2.25□□□□□ -2.05
MCF2-210ENST00000536274 ZNF861PO60384 105 aa2.25□□□□□ -2.05
MCF2-210ENST00000536274 IGHV6-1A0A0B4J1U7 121 aa2.25□□□□□ -2.05
MCF2-210ENST00000536274 A8MWP4 228 aa2.25□□□□□ -2.05
MCF2-210ENST00000536274 DHRS4-AS1Q9P1J3 65 aa2.25□□□□□ -2.05
MCF2-210ENST00000536274 FAT2Q9NYQ8 4349 aa2.24□□□□□ -2.05
MCF2-210ENST00000536274 SPATA8Q6RVD6 105 aa2.24□□□□□ -2.05
MCF2-210ENST00000536274 H3BPC8 53 aa2.24□□□□□ -2.05
MCF2-210ENST00000536274 Q5W150 140 aa2.24□□□□□ -2.05
MCF2-210ENST00000536274 PRR34Q9NV39 138 aa2.24□□□□□ -2.05
MCF2-210ENST00000536274 DNAH11Q96DT5 4516 aa2.24□□□□□ -2.05
MCF2-210ENST00000536274 LINC00472Q9H8W2 130 aa2.23□□□□□ -2.05
MCF2-210ENST00000536274 KRTAP26-1Q6PEX3 210 aa2.23□□□□□ -2.05
MCF2-210ENST00000536274 TENM3Q9P273 2699 aa2.23□□□□□ -2.05
MCF2-210ENST00000536274 VPS13DQ5THJ4 4388 aa2.23□□□□□ -2.05
MCF2-210ENST00000536274 A8MUU9 505 aa2.23□□□□□ -2.05
MCF2-210ENST00000536274 CMC4P56277 68 aaPredicted RBP2.23□□□□□ -2.05
MCF2-210ENST00000536274 KRTAP11-1Q8IUC1 163 aa2.22□□□□□ -2.05
MCF2-210ENST00000536274 NDUFAF8A1L188 74 aa2.22□□□□□ -2.05
MCF2-210ENST00000536274 KRTAP25-1Q3LHN0 102 aa2.22□□□□□ -2.05
MCF2-210ENST00000536274 DNAH2Q9P225 4427 aa2.22□□□□□ -2.05
MCF2-210ENST00000536274 NOTCH1P46531 2555 aa2.22□□□□□ -2.05
MCF2-210ENST00000536274 SPINK1P00995 79 aa2.22□□□□□ -2.05
MCF2-210ENST00000536274 EPPK1P58107 5090 aaKnown RBP2.22□□□□□ -2.05
MCF2-210ENST00000536274 STARD9Q9P2P6 4700 aa2.21□□□□□ -2.06
MCF2-210ENST00000536274 A0A1B0GW54 56 aa2.21□□□□□ -2.06
MCF2-210ENST00000536274 IGLV5-52A0A0A0MRZ9 124 aa2.21□□□□□ -2.06
MCF2-210ENST00000536274 UQCR11O14957 56 aa2.21□□□□□ -2.06
MCF2-210ENST00000536274 IGLV9-49A0A0B4J1Y8 123 aa2.21□□□□□ -2.06
MCF2-210ENST00000536274 CDK2AP2O75956 126 aa2.21□□□□□ -2.06
MCF2-210ENST00000536274 SPRR1AP35321 89 aa2.21□□□□□ -2.06
MCF2-210ENST00000536274 SPINK6Q6UWN8 80 aa2.2□□□□□ -2.06
MCF2-210ENST00000536274 Q8N1X5 172 aa2.2□□□□□ -2.06
MCF2-210ENST00000536274 C8orf17Q9NRJ1 99 aa2.2□□□□□ -2.06
MCF2-210ENST00000536274 KMT2AQ03164 3969 aa2.2□□□□□ -2.06
MCF2-210ENST00000536274 FRAS1Q86XX4 4008 aa2.2□□□□□ -2.06
MCF2-210ENST00000536274 TGP01266 2768 aa2.2□□□□□ -2.06
MCF2-210ENST00000536274 DMBT1Q9UGM3 2413 aaPredicted RBP2.2□□□□□ -2.06
MCF2-210ENST00000536274 A0A1B0GVY2 172 aa2.19□□□□□ -2.06
MCF2-210ENST00000536274 LINC00304Q8N9R0 145 aa2.19□□□□□ -2.06
MCF2-210ENST00000536274 ANAPC11Q9NYG5 84 aa2.19□□□□□ -2.06
MCF2-210ENST00000536274 Q96NJ1 140 aa2.19□□□□□ -2.06
MCF2-210ENST00000536274 DEFB131BA0A096LNP1 70 aa2.19□□□□□ -2.06
MCF2-210ENST00000536274 ACYP2P14621 99 aa2.19□□□□□ -2.06
MCF2-210ENST00000536274 SSBP3-AS1Q7Z2R9 100 aa2.19□□□□□ -2.06
MCF2-210ENST00000536274 CHTF8P0CG12 524 aa2.18□□□□□ -2.06
MCF2-210ENST00000536274 LINC00483Q53H64 154 aa2.18□□□□□ -2.06
MCF2-210ENST00000536274 PCLOQ9Y6V0 5065 aa2.18□□□□□ -2.06
MCF2-210ENST00000536274 DMAC1Q96GE9 116 aa2.18□□□□□ -2.06
MCF2-210ENST00000536274 ASB16-AS1Q495Z4 193 aa2.17□□□□□ -2.06
MCF2-210ENST00000536274 SPINT4Q6UDR6 99 aa2.17□□□□□ -2.06
MCF2-210ENST00000536274 MRPL34Q9BQ48 92 aaKnown RBP2.17□□□□□ -2.06
MCF2-210ENST00000536274 PKHD1P08F94 4074 aa2.17□□□□□ -2.06
MCF2-210ENST00000536274 VPS13BQ7Z7G8 4022 aa2.17□□□□□ -2.06
MCF2-210ENST00000536274 TP53AIP1Q9HCN2 124 aa2.16□□□□□ -2.06
MCF2-210ENST00000536274 H0YAA0 97 aa2.16□□□□□ -2.06
MCF2-210ENST00000536274 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.06
MCF2-210ENST00000536274 A0A1B0GVX0 72 aa2.15□□□□□ -2.06
MCF2-210ENST00000536274 C10orf95Q9H7T3 257 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms