RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 IGKV2-24A0A0C4DH68 120 aa4.88□□□□□ -1.63
COL21A1-212ENST00000535941 LINC00208Q96KT6 92 aa4.88□□□□□ -1.63
COL21A1-212ENST00000535941 SPRR4Q96PI1 79 aa4.88□□□□□ -1.63
COL21A1-212ENST00000535941 ST20-AS1Q8NBB2 130 aa4.87□□□□□ -1.63
COL21A1-212ENST00000535941 A6NN06 94 aa4.87□□□□□ -1.63
COL21A1-212ENST00000535941 ZCCHC13Q8WW36 166 aaKnown RBP4.87□□□□□ -1.63
COL21A1-212ENST00000535941 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
COL21A1-212ENST00000535941 ADM2Q7Z4H4 148 aa4.86□□□□□ -1.63
COL21A1-212ENST00000535941 ZNF706Q9Y5V0 76 aaPredicted RBP4.85□□□□□ -1.63
COL21A1-212ENST00000535941 KRTAP10-1P60331 282 aa4.84□□□□□ -1.63
COL21A1-212ENST00000535941 PRLHP81277 87 aa4.84□□□□□ -1.64
COL21A1-212ENST00000535941 LINC01554Q52M75 96 aa4.84□□□□□ -1.64
COL21A1-212ENST00000535941 A0A1W2PNM2 257 aa4.83□□□□□ -1.64
COL21A1-212ENST00000535941 DEFB116Q30KQ4 102 aa4.83□□□□□ -1.64
COL21A1-212ENST00000535941 PSORS1C2Q9UIG4 136 aa4.83□□□□□ -1.64
COL21A1-212ENST00000535941 K7EQZ3 153 aa4.83□□□□□ -1.64
COL21A1-212ENST00000535941 LINC00313P59037 77 aa4.83□□□□□ -1.64
COL21A1-212ENST00000535941 WFDC13Q8IUB5 93 aa4.83□□□□□ -1.64
COL21A1-212ENST00000535941 Q75L30 129 aa4.82□□□□□ -1.64
COL21A1-212ENST00000535941 RPL37AP61513 92 aaKnown RBP4.82□□□□□ -1.64
COL21A1-212ENST00000535941 CDC42SE1Q9NRR8 79 aa4.82□□□□□ -1.64
COL21A1-212ENST00000535941 MOBPQ13875 183 aa4.81□□□□□ -1.64
COL21A1-212ENST00000535941 CIRBP-AS1Q8TBR5 109 aa4.81□□□□□ -1.64
COL21A1-212ENST00000535941 KRTAP10-4P60372 401 aaPredicted RBP4.81□□□□□ -1.64
COL21A1-212ENST00000535941 Q8NBF4 154 aa4.81□□□□□ -1.64
COL21A1-212ENST00000535941 HSPG2P98160 4391 aa4.8□□□□□ -1.64
COL21A1-212ENST00000535941 FAT3Q8TDW7 4589 aa4.8□□□□□ -1.64
COL21A1-212ENST00000535941 C1orf137Q5JT78 98 aa4.8□□□□□ -1.64
COL21A1-212ENST00000535941 SRRM2Q9UQ35 2752 aaKnown RBP4.8□□□□□ -1.64
COL21A1-212ENST00000535941 ZNF861PO60384 105 aa4.8□□□□□ -1.64
COL21A1-212ENST00000535941 IGFL1Q6UW32 110 aa4.8□□□□□ -1.64
COL21A1-212ENST00000535941 LOC101927531A0A1B0GV80 90 aa4.79□□□□□ -1.64
COL21A1-212ENST00000535941 DSCR10P59022 87 aa4.79□□□□□ -1.64
COL21A1-212ENST00000535941 IGLV7-43P04211 117 aa4.79□□□□□ -1.64
COL21A1-212ENST00000535941 H0Y9P7 68 aa4.78□□□□□ -1.64
COL21A1-212ENST00000535941 TNXBP22105 4242 aa4.78□□□□□ -1.64
COL21A1-212ENST00000535941 COA5Q86WW8 74 aa4.77□□□□□ -1.65
COL21A1-212ENST00000535941 SPANXA2-OT1Q8N9U9 137 aa4.77□□□□□ -1.65
COL21A1-212ENST00000535941 SPAG11AQ6PDA7 123 aa4.77□□□□□ -1.65
COL21A1-212ENST00000535941 RETNLBQ9BQ08 111 aa4.76□□□□□ -1.65
COL21A1-212ENST00000535941 CASC2Q6XLA1 102 aa4.76□□□□□ -1.65
COL21A1-212ENST00000535941 RYR1P21817 5038 aa4.75□□□□□ -1.65
COL21A1-212ENST00000535941 KRTAP1-4P0C5Y4 121 aa4.75□□□□□ -1.65
COL21A1-212ENST00000535941 Q96NJ1 140 aa4.74□□□□□ -1.65
COL21A1-212ENST00000535941 SPINK7P58062 85 aa4.73□□□□□ -1.65
COL21A1-212ENST00000535941 H3BPC8 53 aa4.72□□□□□ -1.65
COL21A1-212ENST00000535941 LINC00472Q9H8W2 130 aa4.72□□□□□ -1.65
COL21A1-212ENST00000535941 ASB16-AS1Q495Z4 193 aa4.71□□□□□ -1.66
COL21A1-212ENST00000535941 PCOTHQ58A44 107 aa4.71□□□□□ -1.66
COL21A1-212ENST00000535941 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
COL21A1-212ENST00000535941 FAT1Q14517 4588 aa4.7□□□□□ -1.66
COL21A1-212ENST00000535941 KRTAP13-2Q52LG2 175 aa4.7□□□□□ -1.66
COL21A1-212ENST00000535941 A0A0G2JQZ4 141 aa4.69□□□□□ -1.66
COL21A1-212ENST00000535941 LINC01558Q9Y6Z2 57 aa4.69□□□□□ -1.66
COL21A1-212ENST00000535941 A0A087WSZ3 146 aa4.69□□□□□ -1.66
COL21A1-212ENST00000535941 IGLV7-46A0A075B6I9 117 aa4.67□□□□□ -1.66
COL21A1-212ENST00000535941 CSAG1Q6PB30 78 aa4.67□□□□□ -1.66
COL21A1-212ENST00000535941 EPPK1P58107 5090 aaKnown RBP4.66□□□□□ -1.66
COL21A1-212ENST00000535941 A0A087X002 238 aa4.65□□□□□ -1.66
COL21A1-212ENST00000535941 KRTAP29-1A8MX34 341 aaPredicted RBP4.65□□□□□ -1.66
COL21A1-212ENST00000535941 SPINK6Q6UWN8 80 aa4.65□□□□□ -1.66
COL21A1-212ENST00000535941 SSBP3-AS1Q7Z2R9 100 aa4.65□□□□□ -1.66
COL21A1-212ENST00000535941 KRTAP17-1Q9BYP8 105 aa4.64□□□□□ -1.67
COL21A1-212ENST00000535941 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
COL21A1-212ENST00000535941 ANAPC11Q9NYG5 84 aa4.63□□□□□ -1.67
COL21A1-212ENST00000535941 CDK2AP2O75956 126 aa4.62□□□□□ -1.67
COL21A1-212ENST00000535941 A8MWP4 228 aa4.62□□□□□ -1.67
COL21A1-212ENST00000535941 FLG2Q5D862 2391 aaPredicted RBP4.61□□□□□ -1.67
COL21A1-212ENST00000535941 PLA2G1BP04054 148 aaKnown RBP4.61□□□□□ -1.67
COL21A1-212ENST00000535941 IGLV9-49A0A0B4J1Y8 123 aa4.61□□□□□ -1.67
COL21A1-212ENST00000535941 HRES1P13985 223 aa4.59□□□□□ -1.67
COL21A1-212ENST00000535941 MMP24-AS1A0A0U1RRL7 71 aa4.59□□□□□ -1.67
COL21A1-212ENST00000535941 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
COL21A1-212ENST00000535941 LRP1Q07954 4544 aaKnown RBP4.55□□□□□ -1.68
COL21A1-212ENST00000535941 A0A1B0GVX0 72 aa4.54□□□□□ -1.68
COL21A1-212ENST00000535941 KRTAP16-1A8MUX0 517 aa4.54□□□□□ -1.68
COL21A1-212ENST00000535941 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
COL21A1-212ENST00000535941 IGHV6-1A0A0B4J1U7 121 aa4.54□□□□□ -1.68
COL21A1-212ENST00000535941 A0A1B0GU69 56 aa4.53□□□□□ -1.68
COL21A1-212ENST00000535941 KIAA1109Q2LD37 5005 aa4.52□□□□□ -1.69
COL21A1-212ENST00000535941 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
COL21A1-212ENST00000535941 SPINK1P00995 79 aa4.52□□□□□ -1.69
COL21A1-212ENST00000535941 C8orf17Q9NRJ1 99 aa4.51□□□□□ -1.69
COL21A1-212ENST00000535941 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
COL21A1-212ENST00000535941 NOTCH2NLQ7Z3S9 236 aa4.5□□□□□ -1.69
COL21A1-212ENST00000535941 SMR3BP02814 79 aaPredicted RBP4.5□□□□□ -1.69
COL21A1-212ENST00000535941 ROMO1P60602 79 aa4.5□□□□□ -1.69
COL21A1-212ENST00000535941 HERC2O95714 4834 aa4.49□□□□□ -1.69
COL21A1-212ENST00000535941 ACYP2P14621 99 aa4.49□□□□□ -1.69
COL21A1-212ENST00000535941 UQCR11O14957 56 aa4.49□□□□□ -1.69
COL21A1-212ENST00000535941 TYMSOSQ8TAI1 123 aa4.48□□□□□ -1.69
COL21A1-212ENST00000535941 BIRC6Q9NR09 4857 aa4.48□□□□□ -1.69
COL21A1-212ENST00000535941 SPATA8Q6RVD6 105 aa4.47□□□□□ -1.69
COL21A1-212ENST00000535941 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
COL21A1-212ENST00000535941 Q5VSD8 79 aa4.47□□□□□ -1.69
COL21A1-212ENST00000535941 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
COL21A1-212ENST00000535941 MT1HL1P0DM35 61 aa4.46□□□□□ -1.7
COL21A1-212ENST00000535941 LINC00304Q8N9R0 145 aa4.46□□□□□ -1.7
COL21A1-212ENST00000535941 Q8N1X5 172 aa4.46□□□□□ -1.7
COL21A1-212ENST00000535941 MYCBP2O75592 4640 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms