RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ANK2Q01484 3957 aa9.51□□□□□ -0.89
MCF2L-232ENST00000535094 SPACA4Q8TDM5 124 aa9.5□□□□□ -0.89
MCF2L-232ENST00000535094 Q96NJ1 140 aa9.5□□□□□ -0.89
MCF2L-232ENST00000535094 WWC2-AS2Q96NR7 200 aa9.5□□□□□ -0.89
MCF2L-232ENST00000535094 LINC01558Q9Y6Z2 57 aa9.5□□□□□ -0.89
MCF2L-232ENST00000535094 A0A1B0GU69 56 aa9.5□□□□□ -0.89
MCF2L-232ENST00000535094 Q5W150 140 aa9.5□□□□□ -0.89
MCF2L-232ENST00000535094 LINC00313P59037 77 aa9.46□□□□□ -0.89
MCF2L-232ENST00000535094 C1orf134Q5TEV5 83 aa9.46□□□□□ -0.89
MCF2L-232ENST00000535094 FBN3Q75N90 2809 aa9.46□□□□□ -0.9
MCF2L-232ENST00000535094 DNAH10Q8IVF4 4471 aa9.46□□□□□ -0.9
MCF2L-232ENST00000535094 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
MCF2L-232ENST00000535094 PRAC1Q96KF2 57 aa9.46□□□□□ -0.9
MCF2L-232ENST00000535094 Q6ZR54 194 aa9.44□□□□□ -0.9
MCF2L-232ENST00000535094 C7orf65Q6ZTY9 151 aa9.44□□□□□ -0.9
MCF2L-232ENST00000535094 KRTAP13-1Q8IUC0 172 aa9.43□□□□□ -0.9
MCF2L-232ENST00000535094 IGLV7-43P04211 117 aa9.38□□□□□ -0.91
MCF2L-232ENST00000535094 A6NN06 94 aa9.36□□□□□ -0.91
MCF2L-232ENST00000535094 Q6ZRN7 208 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-232ENST00000535094 FAM229AH3BQW9 127 aa9.35□□□□□ -0.91
MCF2L-232ENST00000535094 LINC00483Q53H64 154 aa9.34□□□□□ -0.91
MCF2L-232ENST00000535094 DMBT1Q9UGM3 2413 aaPredicted RBP9.32□□□□□ -0.92
MCF2L-232ENST00000535094 LYSTQ99698 3801 aa9.31□□□□□ -0.92
MCF2L-232ENST00000535094 ADM2Q7Z4H4 148 aa9.3□□□□□ -0.92
MCF2L-232ENST00000535094 FLG2Q5D862 2391 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-232ENST00000535094 MEGF8Q7Z7M0 2845 aa9.29□□□□□ -0.92
MCF2L-232ENST00000535094 C8orf87E5RJ46 101 aa9.29□□□□□ -0.92
MCF2L-232ENST00000535094 MIR22HGQ0VDD5 57 aa9.29□□□□□ -0.92
MCF2L-232ENST00000535094 Q8N1X5 172 aa9.28□□□□□ -0.92
MCF2L-232ENST00000535094 PLAC8Q9NZF1 115 aa9.28□□□□□ -0.92
MCF2L-232ENST00000535094 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.93
MCF2L-232ENST00000535094 HUWE1Q7Z6Z7 4374 aaKnown RBP9.26□□□□□ -0.93
MCF2L-232ENST00000535094 UQCR11O14957 56 aa9.26□□□□□ -0.93
MCF2L-232ENST00000535094 ASB16-AS1Q495Z4 193 aa9.26□□□□□ -0.93
MCF2L-232ENST00000535094 PLA2G1BP04054 148 aaKnown RBP9.2□□□□□ -0.94
MCF2L-232ENST00000535094 DMAC1Q96GE9 116 aa9.19□□□□□ -0.94
MCF2L-232ENST00000535094 TYMSOSQ8TAI1 123 aa9.18□□□□□ -0.94
MCF2L-232ENST00000535094 KRTAP10-2P60368 255 aa9.17□□□□□ -0.94
MCF2L-232ENST00000535094 DNAH9Q9NYC9 4486 aa9.13□□□□□ -0.95
MCF2L-232ENST00000535094 C9orf92A6NGG3 77 aa9.12□□□□□ -0.95
MCF2L-232ENST00000535094 SMR3BP02814 79 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-232ENST00000535094 KRTAP13-2Q52LG2 175 aa9.08□□□□□ -0.96
MCF2L-232ENST00000535094 CSAG1Q6PB30 78 aa9.07□□□□□ -0.96
MCF2L-232ENST00000535094 LINC01554Q52M75 96 aa9.04□□□□□ -0.96
MCF2L-232ENST00000535094 KRTAP13-3Q3SY46 172 aa9.03□□□□□ -0.96
MCF2L-232ENST00000535094 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
MCF2L-232ENST00000535094 PLECQ15149 4684 aaKnown RBP9.02□□□□□ -0.96
MCF2L-232ENST00000535094 SPATA8Q6RVD6 105 aa9.01□□□□□ -0.97
MCF2L-232ENST00000535094 DNAH7Q8WXX0 4024 aa8.98□□□□□ -0.97
MCF2L-232ENST00000535094 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
MCF2L-232ENST00000535094 CMYA5Q8N3K9 4069 aa8.96□□□□□ -0.98
MCF2L-232ENST00000535094 LINC00304Q8N9R0 145 aa8.95□□□□□ -0.98
MCF2L-232ENST00000535094 DNAH1Q9P2D7 4330 aa8.94□□□□□ -0.98
MCF2L-232ENST00000535094 FRAS1Q86XX4 4008 aa8.93□□□□□ -0.98
MCF2L-232ENST00000535094 K7ERS5 55 aa8.89□□□□□ -0.99
MCF2L-232ENST00000535094 KRTAP16-1A8MUX0 517 aa8.85□□□□□ -0.99
MCF2L-232ENST00000535094 A0A1B0GU33 70 aa8.85□□□□□ -0.99
MCF2L-232ENST00000535094 DNAH8Q96JB1 4490 aa8.83□□□□□ -1
MCF2L-232ENST00000535094 DNAH3Q8TD57 4116 aa8.81□□□□□ -1
MCF2L-232ENST00000535094 KMT2AQ03164 3969 aa8.81□□□□□ -1
MCF2L-232ENST00000535094 STARD9Q9P2P6 4700 aa8.8□□□□□ -1
MCF2L-232ENST00000535094 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
MCF2L-232ENST00000535094 H3BS24 57 aa8.78□□□□□ -1
MCF2L-232ENST00000535094 A0A0D9SG42 100 aa8.78□□□□□ -1
MCF2L-232ENST00000535094 DNAH11Q96DT5 4516 aa8.75□□□□□ -1.01
MCF2L-232ENST00000535094 Q6ZSA8 131 aa8.74□□□□□ -1.01
MCF2L-232ENST00000535094 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
MCF2L-232ENST00000535094 H0YAA0 97 aa8.69□□□□□ -1.02
MCF2L-232ENST00000535094 PRKDCP78527 4128 aaKnown RBP8.66□□□□□ -1.02
MCF2L-232ENST00000535094 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
MCF2L-232ENST00000535094 HECTD4Q9Y4D8 3996 aa8.62□□□□□ -1.03
MCF2L-232ENST00000535094 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
MCF2L-232ENST00000535094 DNAH6Q9C0G6 4158 aa8.6□□□□□ -1.03
MCF2L-232ENST00000535094 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
MCF2L-232ENST00000535094 DNAH2Q9P225 4427 aa8.58□□□□□ -1.04
MCF2L-232ENST00000535094 SPINT4Q6UDR6 99 aa8.58□□□□□ -1.04
MCF2L-232ENST00000535094 KRTAP25-1Q3LHN0 102 aa8.57□□□□□ -1.04
MCF2L-232ENST00000535094 A8MUU9 505 aa8.55□□□□□ -1.04
MCF2L-232ENST00000535094 COX6B2Q6YFQ2 88 aa8.52□□□□□ -1.04
MCF2L-232ENST00000535094 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
MCF2L-232ENST00000535094 ALMS1Q8TCU4 4167 aa8.47□□□□□ -1.05
MCF2L-232ENST00000535094 C20orf166-AS1Q96NR2 134 aa8.45□□□□□ -1.06
MCF2L-232ENST00000535094 ROMO1P60602 79 aa8.42□□□□□ -1.06
MCF2L-232ENST00000535094 RPL37P61927 97 aaKnown RBP8.42□□□□□ -1.06
MCF2L-232ENST00000535094 VPS13BQ7Z7G8 4022 aa8.39□□□□□ -1.07
MCF2L-232ENST00000535094 DNHD1Q96M86 4753 aa8.38□□□□□ -1.07
MCF2L-232ENST00000535094 DYNC2H1Q8NCM8 4307 aaKnown RBP8.38□□□□□ -1.07
MCF2L-232ENST00000535094 DNAH5Q8TE73 4624 aa8.36□□□□□ -1.07
MCF2L-232ENST00000535094 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
MCF2L-232ENST00000535094 C10orf95Q9H7T3 257 aa8.35□□□□□ -1.07
MCF2L-232ENST00000535094 S4R3F8 94 aa8.33□□□□□ -1.08
MCF2L-232ENST00000535094 FAT1Q14517 4588 aa8.33□□□□□ -1.08
MCF2L-232ENST00000535094 P0C880 135 aa8.22□□□□□ -1.09
MCF2L-232ENST00000535094 HYDINQ4G0P3 5121 aa8.22□□□□□ -1.09
MCF2L-232ENST00000535094 Q5VSD8 79 aa8.22□□□□□ -1.09
MCF2L-232ENST00000535094 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
MCF2L-232ENST00000535094 PKHD1P08F94 4074 aa8.17□□□□□ -1.1
MCF2L-232ENST00000535094 KRTAP10-8P60410 259 aa8.15□□□□□ -1.11
MCF2L-232ENST00000535094 MYCBP2O75592 4640 aa8.15□□□□□ -1.11
MCF2L-232ENST00000535094 FAT2Q9NYQ8 4349 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms