RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 PANO1I0J062 215 aa11.58□□□□□ -0.56
SMPD1-210ENST00000534405 SPRR1BP22528 89 aa11.56□□□□□ -0.56
SMPD1-210ENST00000534405 RETNLBQ9BQ08 111 aa11.54□□□□□ -0.56
SMPD1-210ENST00000534405 NBDYA0A0U1RRE5 68 aa11.54□□□□□ -0.56
SMPD1-210ENST00000534405 Q6ZRN7 208 aaPredicted RBP11.53□□□□□ -0.56
SMPD1-210ENST00000534405 C8orf17Q9NRJ1 99 aa11.52□□□□□ -0.56
SMPD1-210ENST00000534405 CSAG1Q6PB30 78 aa11.5□□□□□ -0.57
SMPD1-210ENST00000534405 ALMS1Q8TCU4 4167 aa11.49□□□□□ -0.57
SMPD1-210ENST00000534405 Q96NJ1 140 aa11.49□□□□□ -0.57
SMPD1-210ENST00000534405 ACYP2P14621 99 aa11.47□□□□□ -0.57
SMPD1-210ENST00000534405 KRTAP13-1Q8IUC0 172 aa11.46□□□□□ -0.58
SMPD1-210ENST00000534405 A0A1B0GU69 56 aa11.45□□□□□ -0.58
SMPD1-210ENST00000534405 STARD9Q9P2P6 4700 aa11.45□□□□□ -0.58
SMPD1-210ENST00000534405 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.45□□□□□ -0.58
SMPD1-210ENST00000534405 MIR22HGQ0VDD5 57 aa11.44□□□□□ -0.58
SMPD1-210ENST00000534405 NUPR2A6NF83 97 aa11.43□□□□□ -0.58
SMPD1-210ENST00000534405 MRPL34Q9BQ48 92 aaKnown RBP11.42□□□□□ -0.58
SMPD1-210ENST00000534405 SPACA4Q8TDM5 124 aa11.4□□□□□ -0.58
SMPD1-210ENST00000534405 UQCR11O14957 56 aa11.39□□□□□ -0.59
SMPD1-210ENST00000534405 VPS13DQ5THJ4 4388 aa11.38□□□□□ -0.59
SMPD1-210ENST00000534405 A0A1B0GVX0 72 aa11.38□□□□□ -0.59
SMPD1-210ENST00000534405 PRKDCP78527 4128 aaKnown RBP11.36□□□□□ -0.59
SMPD1-210ENST00000534405 IGHV6-1A0A0B4J1U7 121 aa11.35□□□□□ -0.59
SMPD1-210ENST00000534405 DMAC1Q96GE9 116 aa11.34□□□□□ -0.59
SMPD1-210ENST00000534405 A0A087WTM6 91 aa11.34□□□□□ -0.59
SMPD1-210ENST00000534405 KRTAP13-3Q3SY46 172 aa11.33□□□□□ -0.6
SMPD1-210ENST00000534405 IGLV9-49A0A0B4J1Y8 123 aa11.32□□□□□ -0.6
SMPD1-210ENST00000534405 KMT2AQ03164 3969 aa11.31□□□□□ -0.6
SMPD1-210ENST00000534405 HECTD4Q9Y4D8 3996 aa11.3□□□□□ -0.6
SMPD1-210ENST00000534405 ZNF861PO60384 105 aa11.29□□□□□ -0.6
SMPD1-210ENST00000534405 C1orf134Q5TEV5 83 aa11.28□□□□□ -0.6
SMPD1-210ENST00000534405 Q5W150 140 aa11.28□□□□□ -0.6
SMPD1-210ENST00000534405 DNAH2Q9P225 4427 aa11.26□□□□□ -0.61
SMPD1-210ENST00000534405 FRAS1Q86XX4 4008 aa11.26□□□□□ -0.61
SMPD1-210ENST00000534405 CDK2AP2O75956 126 aa11.25□□□□□ -0.61
SMPD1-210ENST00000534405 LINC00483Q53H64 154 aa11.25□□□□□ -0.61
SMPD1-210ENST00000534405 PSORS1C2Q9UIG4 136 aa11.25□□□□□ -0.61
SMPD1-210ENST00000534405 NOTCH2NLQ7Z3S9 236 aa11.25□□□□□ -0.61
SMPD1-210ENST00000534405 DNAH8Q96JB1 4490 aa11.23□□□□□ -0.61
SMPD1-210ENST00000534405 ANAPC11Q9NYG5 84 aa11.23□□□□□ -0.61
SMPD1-210ENST00000534405 ZNF706Q9Y5V0 76 aaPredicted RBP11.23□□□□□ -0.61
SMPD1-210ENST00000534405 IGLV5-52A0A0A0MRZ9 124 aa11.22□□□□□ -0.61
SMPD1-210ENST00000534405 WWC2-AS2Q96NR7 200 aa11.21□□□□□ -0.61
SMPD1-210ENST00000534405 DNAH17Q9UFH2 4485 aa11.21□□□□□ -0.61
SMPD1-210ENST00000534405 ROMO1P60602 79 aa11.18□□□□□ -0.62
SMPD1-210ENST00000534405 FBN3Q75N90 2809 aa11.17□□□□□ -0.62
SMPD1-210ENST00000534405 MEGF8Q7Z7M0 2845 aa11.17□□□□□ -0.62
SMPD1-210ENST00000534405 TGP01266 2768 aa11.14□□□□□ -0.63
SMPD1-210ENST00000534405 KRTAP25-1Q3LHN0 102 aa11.11□□□□□ -0.63
SMPD1-210ENST00000534405 IGLV7-43P04211 117 aa11.07□□□□□ -0.64
SMPD1-210ENST00000534405 DNHD1Q96M86 4753 aa11.05□□□□□ -0.64
SMPD1-210ENST00000534405 DNAH6Q9C0G6 4158 aa11.04□□□□□ -0.64
SMPD1-210ENST00000534405 LY6G6CO95867 125 aa11□□□□□ -0.65
SMPD1-210ENST00000534405 A8MUU9 505 aa10.99□□□□□ -0.65
SMPD1-210ENST00000534405 IGKV2-30P06310 120 aa10.99□□□□□ -0.65
SMPD1-210ENST00000534405 DNAH11Q96DT5 4516 aa10.99□□□□□ -0.65
SMPD1-210ENST00000534405 DNAH5Q8TE73 4624 aa10.98□□□□□ -0.65
SMPD1-210ENST00000534405 KRTAP10-2P60368 255 aa10.96□□□□□ -0.65
SMPD1-210ENST00000534405 SPINK6Q6UWN8 80 aa10.96□□□□□ -0.65
SMPD1-210ENST00000534405 FAM229AH3BQW9 127 aa10.96□□□□□ -0.66
SMPD1-210ENST00000534405 CIRBP-AS1Q8TBR5 109 aa10.95□□□□□ -0.66
SMPD1-210ENST00000534405 LINC00304Q8N9R0 145 aa10.9□□□□□ -0.66
SMPD1-210ENST00000534405 P0C880 135 aa10.88□□□□□ -0.67
SMPD1-210ENST00000534405 SSBP3-AS1Q7Z2R9 100 aa10.84□□□□□ -0.67
SMPD1-210ENST00000534405 LRP1BQ9NZR2 4599 aa10.83□□□□□ -0.68
SMPD1-210ENST00000534405 HYDINQ4G0P3 5121 aa10.82□□□□□ -0.68
SMPD1-210ENST00000534405 H0YAA0 97 aa10.82□□□□□ -0.68
SMPD1-210ENST00000534405 KRTAP13-2Q52LG2 175 aa10.81□□□□□ -0.68
SMPD1-210ENST00000534405 KRTAP10-1P60331 282 aa10.8□□□□□ -0.68
SMPD1-210ENST00000534405 PKD1P98161 4303 aa10.8□□□□□ -0.68
SMPD1-210ENST00000534405 IGKV2D-30A0A075B6S6 120 aa10.79□□□□□ -0.68
SMPD1-210ENST00000534405 Q6ZSA8 131 aa10.78□□□□□ -0.68
SMPD1-210ENST00000534405 FAT2Q9NYQ8 4349 aa10.77□□□□□ -0.69
SMPD1-210ENST00000534405 KRTAP1-4P0C5Y4 121 aa10.69□□□□□ -0.7
SMPD1-210ENST00000534405 VPS13BQ7Z7G8 4022 aa10.68□□□□□ -0.7
SMPD1-210ENST00000534405 SPINK1P00995 79 aa10.67□□□□□ -0.7
SMPD1-210ENST00000534405 KRTAP16-1A8MUX0 517 aa10.66□□□□□ -0.7
SMPD1-210ENST00000534405 CRIPTQ9P021 101 aa10.59□□□□□ -0.71
SMPD1-210ENST00000534405 A0A1B0GU33 70 aa10.59□□□□□ -0.71
SMPD1-210ENST00000534405 TYMSOSQ8TAI1 123 aa10.54□□□□□ -0.72
SMPD1-210ENST00000534405 H1FX-AS1Q4G0G2 97 aa10.54□□□□□ -0.72
SMPD1-210ENST00000534405 PKHD1P08F94 4074 aa10.52□□□□□ -0.73
SMPD1-210ENST00000534405 Q8N1X5 172 aa10.5□□□□□ -0.73
SMPD1-210ENST00000534405 K7ERS5 55 aa10.49□□□□□ -0.73
SMPD1-210ENST00000534405 SPINT4Q6UDR6 99 aa10.45□□□□□ -0.74
SMPD1-210ENST00000534405 KRTAP21-3Q3LHN1 58 aa10.43□□□□□ -0.74
SMPD1-210ENST00000534405 C20orf166-AS1Q96NR2 134 aa10.43□□□□□ -0.74
SMPD1-210ENST00000534405 FLG2Q5D862 2391 aaPredicted RBP10.42□□□□□ -0.74
SMPD1-210ENST00000534405 SACSQ9NZJ4 4579 aa10.42□□□□□ -0.74
SMPD1-210ENST00000534405 NDUFAF8A1L188 74 aa10.41□□□□□ -0.74
SMPD1-210ENST00000534405 KRTAP15-1Q3LI76 137 aa10.38□□□□□ -0.75
SMPD1-210ENST00000534405 A0A0A0MQY5 61 aa10.36□□□□□ -0.75
SMPD1-210ENST00000534405 SMR3BP02814 79 aaPredicted RBP10.35□□□□□ -0.75
SMPD1-210ENST00000534405 DYNC1H1Q14204 4646 aaKnown RBP10.35□□□□□ -0.75
SMPD1-210ENST00000534405 TPRXLQ17RH7 258 aa10.32□□□□□ -0.76
SMPD1-210ENST00000534405 FAT1Q14517 4588 aa10.29□□□□□ -0.76
SMPD1-210ENST00000534405 RPS29P62273 56 aaKnown RBP10.26□□□□□ -0.77
SMPD1-210ENST00000534405 COX6B2Q6YFQ2 88 aa10.26□□□□□ -0.77
SMPD1-210ENST00000534405 KRTAP10-4P60372 401 aaPredicted RBP10.23□□□□□ -0.77
SMPD1-210ENST00000534405 APOBP04114 4563 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms