RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 MT-ATP8P03928 68 aa3.48□□□□□ -1.85
CHKA-208ENST00000533910 ACYP1P07311 99 aa3.48□□□□□ -1.85
CHKA-208ENST00000533910 PRLHP81277 87 aa3.48□□□□□ -1.85
CHKA-208ENST00000533910 LINC01554Q52M75 96 aa3.48□□□□□ -1.85
CHKA-208ENST00000533910 KMT2CQ8NEZ4 4911 aaKnown RBP3.47□□□□□ -1.85
CHKA-208ENST00000533910 TRBV7-4A0A0J9YYF1 115 aa3.47□□□□□ -1.85
CHKA-208ENST00000533910 KRTAP10-1P60331 282 aa3.47□□□□□ -1.85
CHKA-208ENST00000533910 RBM3P98179 157 aaKnown RBP3.47□□□□□ -1.85
CHKA-208ENST00000533910 Q6ZQT0 140 aa3.47□□□□□ -1.85
CHKA-208ENST00000533910 ST20-AS1Q8NBB2 130 aa3.47□□□□□ -1.85
CHKA-208ENST00000533910 IGLV8-61A0A075B6I0 122 aa3.46□□□□□ -1.86
CHKA-208ENST00000533910 A0A1B0GVY2 172 aa3.46□□□□□ -1.86
CHKA-208ENST00000533910 CCKP06307 115 aa3.46□□□□□ -1.86
CHKA-208ENST00000533910 PDE6GP18545 87 aa3.46□□□□□ -1.86
CHKA-208ENST00000533910 SPRR1BP22528 89 aa3.46□□□□□ -1.86
CHKA-208ENST00000533910 UBE2AP49459 152 aa3.46□□□□□ -1.86
CHKA-208ENST00000533910 HIST1H4AP62805 103 aaKnown RBP3.46□□□□□ -1.86
CHKA-208ENST00000533910 CIRBP-AS1Q8TBR5 109 aa3.46□□□□□ -1.86
CHKA-208ENST00000533910 HIGD2AQ9BW72 106 aa3.46□□□□□ -1.86
CHKA-208ENST00000533910 PSORS1C2Q9UIG4 136 aa3.46□□□□□ -1.86
CHKA-208ENST00000533910 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
CHKA-208ENST00000533910 C7orf65Q6ZTY9 151 aa3.45□□□□□ -1.86
CHKA-208ENST00000533910 COX7CP15954 63 aa3.44□□□□□ -1.86
CHKA-208ENST00000533910 CAMK2N1Q7Z7J9 78 aa3.44□□□□□ -1.86
CHKA-208ENST00000533910 DEFB105AQ8NG35 78 aa3.44□□□□□ -1.86
CHKA-208ENST00000533910 DSCR8Q96T75 97 aa3.44□□□□□ -1.86
CHKA-208ENST00000533910 SRRM2Q9UQ35 2752 aaKnown RBP3.43□□□□□ -1.86
CHKA-208ENST00000533910 ZNF861PO60384 105 aa3.43□□□□□ -1.86
CHKA-208ENST00000533910 LINC00483Q53H64 154 aa3.43□□□□□ -1.86
CHKA-208ENST00000533910 C1orf137Q5JT78 98 aa3.43□□□□□ -1.86
CHKA-208ENST00000533910 SPRR4Q96PI1 79 aa3.43□□□□□ -1.86
CHKA-208ENST00000533910 DYNC1H1Q14204 4646 aaKnown RBP3.43□□□□□ -1.86
CHKA-208ENST00000533910 LRP1BQ9NZR2 4599 aa3.42□□□□□ -1.86
CHKA-208ENST00000533910 IGLV7-43P04211 117 aa3.42□□□□□ -1.86
CHKA-208ENST00000533910 ATP5EP56381 51 aaPredicted RBP3.42□□□□□ -1.86
CHKA-208ENST00000533910 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
CHKA-208ENST00000533910 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
CHKA-208ENST00000533910 LINC00846Q9NV44 126 aa3.42□□□□□ -1.86
CHKA-208ENST00000533910 PKHD1P08F94 4074 aa3.42□□□□□ -1.86
CHKA-208ENST00000533910 F8WEM9 126 aa3.41□□□□□ -1.86
CHKA-208ENST00000533910 Q6JHZ5 121 aa3.41□□□□□ -1.86
CHKA-208ENST00000533910 TRBV7-7A0A0K0K1E9 115 aa3.4□□□□□ -1.87
CHKA-208ENST00000533910 A0A1W2PNM2 257 aa3.4□□□□□ -1.87
CHKA-208ENST00000533910 HAMPP81172 84 aa3.4□□□□□ -1.87
CHKA-208ENST00000533910 ATP5EP2Q5VTU8 51 aa3.4□□□□□ -1.87
CHKA-208ENST00000533910 IGFL1Q6UW32 110 aa3.4□□□□□ -1.87
CHKA-208ENST00000533910 RYR3Q15413 4870 aa3.39□□□□□ -1.87
CHKA-208ENST00000533910 RPL37AP61513 92 aaKnown RBP3.39□□□□□ -1.87
CHKA-208ENST00000533910 UBL5Q9BZL1 73 aa3.39□□□□□ -1.87
CHKA-208ENST00000533910 APOBP04114 4563 aaKnown RBP3.39□□□□□ -1.87
CHKA-208ENST00000533910 ATP11AUNQ6ZP68 121 aa3.38□□□□□ -1.87
CHKA-208ENST00000533910 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
CHKA-208ENST00000533910 C8orf17Q9NRJ1 99 aa3.38□□□□□ -1.87
CHKA-208ENST00000533910 K7ERS5 55 aa3.36□□□□□ -1.87
CHKA-208ENST00000533910 ATOX1O00244 68 aa3.36□□□□□ -1.87
CHKA-208ENST00000533910 BPY2O14599 106 aa3.36□□□□□ -1.87
CHKA-208ENST00000533910 FAM229BQ4G0N7 80 aa3.36□□□□□ -1.87
CHKA-208ENST00000533910 TYMSOSQ8TAI1 123 aa3.36□□□□□ -1.87
CHKA-208ENST00000533910 IGKV3D-7A0A0C4DH55 119 aa3.35□□□□□ -1.87
CHKA-208ENST00000533910 A0A0G2JQZ4 141 aa3.35□□□□□ -1.87
CHKA-208ENST00000533910 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
CHKA-208ENST00000533910 KRTAP1-4P0C5Y4 121 aa3.34□□□□□ -1.87
CHKA-208ENST00000533910 MOBPQ13875 183 aa3.34□□□□□ -1.87
CHKA-208ENST00000533910 NREPQ16612 68 aa3.34□□□□□ -1.87
CHKA-208ENST00000533910 ANAPC11Q9NYG5 84 aa3.34□□□□□ -1.87
CHKA-208ENST00000533910 VPS13BQ7Z7G8 4022 aa3.34□□□□□ -1.88
CHKA-208ENST00000533910 A0A087WSZ3 146 aa3.33□□□□□ -1.88
CHKA-208ENST00000533910 A6NN06 94 aa3.33□□□□□ -1.88
CHKA-208ENST00000533910 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
CHKA-208ENST00000533910 SPINK6Q6UWN8 80 aa3.33□□□□□ -1.88
CHKA-208ENST00000533910 KRTAP13-2Q52LG2 175 aa3.32□□□□□ -1.88
CHKA-208ENST00000533910 SSBP3-AS1Q7Z2R9 100 aa3.32□□□□□ -1.88
CHKA-208ENST00000533910 FAT1Q14517 4588 aa3.32□□□□□ -1.88
CHKA-208ENST00000533910 A0A087WVE0 104 aa3.31□□□□□ -1.88
CHKA-208ENST00000533910 SMR3BP02814 79 aaPredicted RBP3.31□□□□□ -1.88
CHKA-208ENST00000533910 IGKV4-1P06312 121 aa3.3□□□□□ -1.88
CHKA-208ENST00000533910 DSCR10P59022 87 aa3.3□□□□□ -1.88
CHKA-208ENST00000533910 LINC00472Q9H8W2 130 aa3.3□□□□□ -1.88
CHKA-208ENST00000533910 RYR1P21817 5038 aa3.3□□□□□ -1.88
CHKA-208ENST00000533910 A0A1B0GVX0 72 aa3.29□□□□□ -1.88
CHKA-208ENST00000533910 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
CHKA-208ENST00000533910 SERP2Q8N6R1 65 aa3.29□□□□□ -1.88
CHKA-208ENST00000533910 Q96NJ1 140 aa3.29□□□□□ -1.88
CHKA-208ENST00000533910 NDUFC1O43677 76 aa3.28□□□□□ -1.88
CHKA-208ENST00000533910 Q1T7F1 81 aa3.28□□□□□ -1.88
CHKA-208ENST00000533910 Q8N9L7 120 aa3.28□□□□□ -1.88
CHKA-208ENST00000533910 HSPG2P98160 4391 aa3.28□□□□□ -1.89
CHKA-208ENST00000533910 A8MWP4 228 aa3.27□□□□□ -1.89
CHKA-208ENST00000533910 K7EQZ3 153 aa3.27□□□□□ -1.89
CHKA-208ENST00000533910 PKHD1L1Q86WI1 4243 aa3.27□□□□□ -1.89
CHKA-208ENST00000533910 KIAA1109Q2LD37 5005 aa3.26□□□□□ -1.89
CHKA-208ENST00000533910 EPPK1P58107 5090 aaKnown RBP3.26□□□□□ -1.89
CHKA-208ENST00000533910 Q5VSD8 79 aa3.26□□□□□ -1.89
CHKA-208ENST00000533910 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
CHKA-208ENST00000533910 DEFB116Q30KQ4 102 aa3.25□□□□□ -1.89
CHKA-208ENST00000533910 RETNLBQ9BQ08 111 aa3.25□□□□□ -1.89
CHKA-208ENST00000533910 HCG22E2RYF7 251 aa3.24□□□□□ -1.89
CHKA-208ENST00000533910 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
CHKA-208ENST00000533910 MMP24-AS1A0A0U1RRL7 71 aa3.23□□□□□ -1.89
CHKA-208ENST00000533910 hDV103S1A0JD37 113 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms