RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 COL5A1-AS1Q5SY13 56 aa5.68□□□□□ -1.5
SVIP-205ENST00000533774 TEN1Q86WV5 123 aa5.68□□□□□ -1.5
SVIP-205ENST00000533774 IGKV2-30P06310 120 aa5.67□□□□□ -1.5
SVIP-205ENST00000533774 MT1BP07438 61 aa5.67□□□□□ -1.5
SVIP-205ENST00000533774 LINC01545Q5VT33 79 aa5.67□□□□□ -1.5
SVIP-205ENST00000533774 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.67□□□□□ -1.5
SVIP-205ENST00000533774 SCGB1D4Q6XE38 83 aa5.67□□□□□ -1.5
SVIP-205ENST00000533774 SVBPQ8N300 66 aa5.67□□□□□ -1.5
SVIP-205ENST00000533774 SPINK7P58062 85 aa5.66□□□□□ -1.5
SVIP-205ENST00000533774 SMIM20Q8N5G0 67 aa5.66□□□□□ -1.5
SVIP-205ENST00000533774 V9GYY9 64 aa5.66□□□□□ -1.5
SVIP-205ENST00000533774 PPDPFLQ8WWR9 84 aa5.65□□□□□ -1.5
SVIP-205ENST00000533774 COPS9Q8WXC6 57 aa5.65□□□□□ -1.5
SVIP-205ENST00000533774 IGKV4-1P06312 121 aa5.63□□□□□ -1.51
SVIP-205ENST00000533774 A0A1W2PNM2 257 aa5.61□□□□□ -1.51
SVIP-205ENST00000533774 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
SVIP-205ENST00000533774 PAM16Q9Y3D7 125 aa5.61□□□□□ -1.51
SVIP-205ENST00000533774 DEFB116Q30KQ4 102 aa5.6□□□□□ -1.51
SVIP-205ENST00000533774 WFDC13Q8IUB5 93 aa5.6□□□□□ -1.51
SVIP-205ENST00000533774 ZCCHC13Q8WW36 166 aaKnown RBP5.6□□□□□ -1.51
SVIP-205ENST00000533774 IGHV6-1A0A0B4J1U7 121 aa5.58□□□□□ -1.52
SVIP-205ENST00000533774 NDUFV3P56181 108 aaKnown RBP5.58□□□□□ -1.52
SVIP-205ENST00000533774 A0A1B0GX51 115 aa5.56□□□□□ -1.52
SVIP-205ENST00000533774 C3orf79P0CE67 100 aa5.56□□□□□ -1.52
SVIP-205ENST00000533774 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
SVIP-205ENST00000533774 FAM218AQ96MZ4 157 aa5.56□□□□□ -1.52
SVIP-205ENST00000533774 PRO0628Q9UI54 55 aa5.56□□□□□ -1.52
SVIP-205ENST00000533774 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
SVIP-205ENST00000533774 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
SVIP-205ENST00000533774 LINC00472Q9H8W2 130 aa5.55□□□□□ -1.52
SVIP-205ENST00000533774 H3BMG7 143 aa5.53□□□□□ -1.52
SVIP-205ENST00000533774 SPRR2EP22531 72 aa5.53□□□□□ -1.52
SVIP-205ENST00000533774 SPRR2BP35325 72 aa5.53□□□□□ -1.52
SVIP-205ENST00000533774 SPRR2AP35326 72 aa5.53□□□□□ -1.52
SVIP-205ENST00000533774 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
SVIP-205ENST00000533774 Q5VV11 94 aa5.53□□□□□ -1.52
SVIP-205ENST00000533774 HIST3H2BBQ8N257 126 aa5.53□□□□□ -1.52
SVIP-205ENST00000533774 BVES-AS1Q5T3Y7 98 aa5.52□□□□□ -1.53
SVIP-205ENST00000533774 ATOH7Q8N100 152 aa5.52□□□□□ -1.53
SVIP-205ENST00000533774 H1FX-AS1Q4G0G2 97 aa5.5□□□□□ -1.53
SVIP-205ENST00000533774 COA6Q5JTJ3 125 aaKnown RBP5.49□□□□□ -1.53
SVIP-205ENST00000533774 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
SVIP-205ENST00000533774 KRTDAPP60985 99 aa5.48□□□□□ -1.53
SVIP-205ENST00000533774 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
SVIP-205ENST00000533774 TRBV7-4A0A0J9YYF1 115 aa5.47□□□□□ -1.53
SVIP-205ENST00000533774 C8orf87E5RJ46 101 aa5.47□□□□□ -1.53
SVIP-205ENST00000533774 J3KT08 172 aa5.47□□□□□ -1.53
SVIP-205ENST00000533774 HSD52Q0P140 79 aa5.47□□□□□ -1.53
SVIP-205ENST00000533774 HIST1H2BKO60814 126 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 HIST1H2BJP06899 126 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 HIST1H2BOP23527 126 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 HIST1H2BBP33778 126 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 HIST1H2BDP58876 126 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 HIST1H2BCP62807 126 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 HIST2H2BEQ16778 126 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.46□□□□□ -1.54
SVIP-205ENST00000533774 HIST1H2BHQ93079 126 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 RAB37Q96AX2 223 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 HIST1H2BNQ99877 126 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 HIST1H2BMQ99879 126 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
SVIP-205ENST00000533774 J3QR89 54 aa5.45□□□□□ -1.54
SVIP-205ENST00000533774 HIST1H2BLQ99880 126 aa5.45□□□□□ -1.54
SVIP-205ENST00000533774 FABP2P12104 132 aa5.44□□□□□ -1.54
SVIP-205ENST00000533774 C4orf26Q17RF5 130 aa5.44□□□□□ -1.54
SVIP-205ENST00000533774 GTF2H5Q6ZYL4 71 aa5.43□□□□□ -1.54
SVIP-205ENST00000533774 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
SVIP-205ENST00000533774 ANKRD29Q8N6D5 301 aa5.42□□□□□ -1.54
SVIP-205ENST00000533774 IGKV2D-30A0A075B6S6 120 aa5.41□□□□□ -1.54
SVIP-205ENST00000533774 ANAPC13Q9BS18 74 aa5.4□□□□□ -1.54
SVIP-205ENST00000533774 FAM236AA0A1B0GUQ0 79 aa5.39□□□□□ -1.55
SVIP-205ENST00000533774 FAM236BA0A1B0GV22 79 aa5.39□□□□□ -1.55
SVIP-205ENST00000533774 GPR98Q8WXG9 6306 aa5.39□□□□□ -1.55
SVIP-205ENST00000533774 H0YGX0 51 aa5.38□□□□□ -1.55
SVIP-205ENST00000533774 CCKP06307 115 aa5.37□□□□□ -1.55
SVIP-205ENST00000533774 IGKV3D-7A0A0C4DH55 119 aa5.36□□□□□ -1.55
SVIP-205ENST00000533774 C9JAW5 83 aa5.36□□□□□ -1.55
SVIP-205ENST00000533774 SNCGO76070 127 aa5.36□□□□□ -1.55
SVIP-205ENST00000533774 TRACP01848 142 aa5.36□□□□□ -1.55
SVIP-205ENST00000533774 UQCR10Q9UDW1 63 aa5.36□□□□□ -1.55
SVIP-205ENST00000533774 SPRR2DP22532 72 aa5.35□□□□□ -1.55
SVIP-205ENST00000533774 LYRM7Q5U5X0 104 aa5.35□□□□□ -1.55
SVIP-205ENST00000533774 HIST1H4GQ99525 98 aa5.33□□□□□ -1.56
SVIP-205ENST00000533774 C8orf17Q9NRJ1 99 aa5.32□□□□□ -1.56
SVIP-205ENST00000533774 TAX1BP3O14907 124 aa5.31□□□□□ -1.56
SVIP-205ENST00000533774 VAMP8Q9BV40 100 aa5.31□□□□□ -1.56
SVIP-205ENST00000533774 IMUPQ9GZP8 106 aa5.3□□□□□ -1.56
SVIP-205ENST00000533774 K7EP34 96 aa5.29□□□□□ -1.56
SVIP-205ENST00000533774 BATFQ16520 125 aa5.29□□□□□ -1.56
SVIP-205ENST00000533774 DSCR8Q96T75 97 aa5.28□□□□□ -1.56
SVIP-205ENST00000533774 A0A0B4J2C4 111 aa5.26□□□□□ -1.57
SVIP-205ENST00000533774 CCDC179H3BU77 68 aa5.26□□□□□ -1.57
SVIP-205ENST00000533774 Q6ZVQ6 151 aa5.26□□□□□ -1.57
SVIP-205ENST00000533774 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
SVIP-205ENST00000533774 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
SVIP-205ENST00000533774 ORMDL1Q9P0S3 153 aa5.25□□□□□ -1.57
SVIP-205ENST00000533774 KLKP1Q107X0 134 aa5.24□□□□□ -1.57
SVIP-205ENST00000533774 NDUFB1O75438 58 aa5.23□□□□□ -1.57
SVIP-205ENST00000533774 RBM3P98179 157 aaKnown RBP5.23□□□□□ -1.57
SVIP-205ENST00000533774 F8W1H4 67 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms