RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
CAPN1-225ENST00000533704 LINC00643Q86TS7 51 aa5.6□□□□□ -1.51
CAPN1-225ENST00000533704 H0YGX0 51 aa5.59□□□□□ -1.51
CAPN1-225ENST00000533704 FAM218AQ96MZ4 157 aa5.59□□□□□ -1.51
CAPN1-225ENST00000533704 ATOX1O00244 68 aa5.58□□□□□ -1.52
CAPN1-225ENST00000533704 OBSCN-AS1Q96MR7 158 aa5.57□□□□□ -1.52
CAPN1-225ENST00000533704 KRTAP19-2Q3LHN2 52 aa5.56□□□□□ -1.52
CAPN1-225ENST00000533704 TRACP01848 142 aa5.55□□□□□ -1.52
CAPN1-225ENST00000533704 COX7CP15954 63 aa5.54□□□□□ -1.52
CAPN1-225ENST00000533704 COX6B2Q6YFQ2 88 aa5.54□□□□□ -1.52
CAPN1-225ENST00000533704 TMEM258P61165 79 aa5.53□□□□□ -1.52
CAPN1-225ENST00000533704 MT1HP80294 61 aa5.53□□□□□ -1.52
CAPN1-225ENST00000533704 A0A087WSZ3 146 aa5.52□□□□□ -1.53
CAPN1-225ENST00000533704 GHRHP01286 108 aa5.52□□□□□ -1.53
CAPN1-225ENST00000533704 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
CAPN1-225ENST00000533704 Q96NJ1 140 aa5.52□□□□□ -1.53
CAPN1-225ENST00000533704 DNAL4O96015 105 aa5.51□□□□□ -1.53
CAPN1-225ENST00000533704 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
CAPN1-225ENST00000533704 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
CAPN1-225ENST00000533704 M0R2T5 61 aa5.49□□□□□ -1.53
CAPN1-225ENST00000533704 HIST1H4AP62805 103 aaKnown RBP5.49□□□□□ -1.53
CAPN1-225ENST00000533704 Q75L30 129 aa5.49□□□□□ -1.53
CAPN1-225ENST00000533704 ORMDL1Q9P0S3 153 aa5.49□□□□□ -1.53
CAPN1-225ENST00000533704 A0A1W2PNM2 257 aa5.48□□□□□ -1.53
CAPN1-225ENST00000533704 BAALC-AS2P0C853 105 aa5.48□□□□□ -1.53
CAPN1-225ENST00000533704 ATP5EP2Q5VTU8 51 aa5.47□□□□□ -1.53
CAPN1-225ENST00000533704 DSCR10P59022 87 aa5.46□□□□□ -1.54
CAPN1-225ENST00000533704 SERP2Q8N6R1 65 aa5.46□□□□□ -1.54
CAPN1-225ENST00000533704 H3BQ85 93 aa5.44□□□□□ -1.54
CAPN1-225ENST00000533704 TMEM256-PLSCR3K7ERE1 68 aa5.43□□□□□ -1.54
CAPN1-225ENST00000533704 IGKV4-1P06312 121 aa5.43□□□□□ -1.54
CAPN1-225ENST00000533704 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
CAPN1-225ENST00000533704 TRBV7-4A0A0J9YYF1 115 aa5.42□□□□□ -1.54
CAPN1-225ENST00000533704 A8MUU9 505 aa5.42□□□□□ -1.54
CAPN1-225ENST00000533704 CCKP06307 115 aa5.42□□□□□ -1.54
CAPN1-225ENST00000533704 DEFB116Q30KQ4 102 aa5.42□□□□□ -1.54
CAPN1-225ENST00000533704 C20orf166-AS1Q96NR2 134 aa5.42□□□□□ -1.54
CAPN1-225ENST00000533704 LINC00313P59037 77 aa5.4□□□□□ -1.54
CAPN1-225ENST00000533704 IGKV3D-7A0A0C4DH55 119 aa5.38□□□□□ -1.55
CAPN1-225ENST00000533704 FAM236DA0A1B0GTK5 79 aa5.38□□□□□ -1.55
CAPN1-225ENST00000533704 FAM236CP0DP71 79 aa5.38□□□□□ -1.55
CAPN1-225ENST00000533704 IGHV6-1A0A0B4J1U7 121 aa5.37□□□□□ -1.55
CAPN1-225ENST00000533704 JMJD7-PLA2G4BH0Y9G9 81 aa5.37□□□□□ -1.55
CAPN1-225ENST00000533704 RBM3P98179 157 aaKnown RBP5.37□□□□□ -1.55
CAPN1-225ENST00000533704 NOTCH2NLQ7Z3S9 236 aa5.37□□□□□ -1.55
CAPN1-225ENST00000533704 DSCR8Q96T75 97 aa5.37□□□□□ -1.55
CAPN1-225ENST00000533704 C14orf132Q9NPU4 83 aa5.37□□□□□ -1.55
CAPN1-225ENST00000533704 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
CAPN1-225ENST00000533704 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
CAPN1-225ENST00000533704 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
CAPN1-225ENST00000533704 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
CAPN1-225ENST00000533704 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
CAPN1-225ENST00000533704 FLGP20930 4061 aaPredicted RBP5.36□□□□□ -1.55
CAPN1-225ENST00000533704 KRTAP16-1A8MUX0 517 aa5.35□□□□□ -1.55
CAPN1-225ENST00000533704 SERP1Q9Y6X1 66 aa5.35□□□□□ -1.55
CAPN1-225ENST00000533704 UBL5Q9BZL1 73 aa5.34□□□□□ -1.55
CAPN1-225ENST00000533704 LINC00846Q9NV44 126 aa5.34□□□□□ -1.55
CAPN1-225ENST00000533704 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
CAPN1-225ENST00000533704 TRAV7A0A075B6U4 112 aa5.32□□□□□ -1.56
CAPN1-225ENST00000533704 A0A087WVE0 104 aa5.31□□□□□ -1.56
CAPN1-225ENST00000533704 A0A1B0GVX0 72 aa5.31□□□□□ -1.56
CAPN1-225ENST00000533704 CYSTM1Q9H1C7 97 aa5.31□□□□□ -1.56
CAPN1-225ENST00000533704 C8orf87E5RJ46 101 aa5.3□□□□□ -1.56
CAPN1-225ENST00000533704 NDUFC1O43677 76 aa5.3□□□□□ -1.56
CAPN1-225ENST00000533704 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
CAPN1-225ENST00000533704 C4orf26Q17RF5 130 aa5.29□□□□□ -1.56
CAPN1-225ENST00000533704 C20orf197Q8N268 126 aa5.29□□□□□ -1.56
CAPN1-225ENST00000533704 SMIM26A0A096LP01 95 aa5.28□□□□□ -1.56
CAPN1-225ENST00000533704 PDE6GP18545 87 aa5.27□□□□□ -1.57
CAPN1-225ENST00000533704 Q6ZQT0 140 aa5.27□□□□□ -1.57
CAPN1-225ENST00000533704 RBM12B-AS1Q9P1G2 102 aa5.27□□□□□ -1.57
CAPN1-225ENST00000533704 LOC110117498A0A087WWA1 95 aa5.26□□□□□ -1.57
CAPN1-225ENST00000533704 NDUFB1O75438 58 aa5.26□□□□□ -1.57
CAPN1-225ENST00000533704 KLKP1Q107X0 134 aa5.26□□□□□ -1.57
CAPN1-225ENST00000533704 HRES1P13985 223 aa5.25□□□□□ -1.57
CAPN1-225ENST00000533704 CXCL6P80162 114 aa5.24□□□□□ -1.57
CAPN1-225ENST00000533704 ZCCHC13Q8WW36 166 aaKnown RBP5.24□□□□□ -1.57
CAPN1-225ENST00000533704 H7BZZ5 65 aa5.23□□□□□ -1.57
CAPN1-225ENST00000533704 C8orf17Q9NRJ1 99 aa5.22□□□□□ -1.57
CAPN1-225ENST00000533704 A8MWP4 228 aa5.21□□□□□ -1.58
CAPN1-225ENST00000533704 MPLKIPQ8TAP9 179 aa5.21□□□□□ -1.58
CAPN1-225ENST00000533704 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
CAPN1-225ENST00000533704 Q6ZVQ6 151 aa5.2□□□□□ -1.58
CAPN1-225ENST00000533704 A0A1B0GW54 56 aa5.19□□□□□ -1.58
CAPN1-225ENST00000533704 SPINK7P58062 85 aa5.19□□□□□ -1.58
CAPN1-225ENST00000533704 NREPQ16612 68 aa5.19□□□□□ -1.58
CAPN1-225ENST00000533704 Q8N9P0 234 aaPredicted RBP5.18□□□□□ -1.58
CAPN1-225ENST00000533704 MT2AP02795 61 aa5.16□□□□□ -1.58
CAPN1-225ENST00000533704 PRR15Q8IV56 129 aa5.16□□□□□ -1.58
CAPN1-225ENST00000533704 SNURFQ9Y675 71 aa5.16□□□□□ -1.58
CAPN1-225ENST00000533704 WFDC13Q8IUB5 93 aa5.15□□□□□ -1.59
CAPN1-225ENST00000533704 BRK1Q8WUW1 75 aa5.15□□□□□ -1.59
CAPN1-225ENST00000533704 V9GYY9 64 aa5.15□□□□□ -1.59
CAPN1-225ENST00000533704 TMEM254Q8TBM7 123 aa5.14□□□□□ -1.59
CAPN1-225ENST00000533704 MMP24-AS1A0A0U1RRL7 71 aa5.13□□□□□ -1.59
CAPN1-225ENST00000533704 NDUFS5O43920 106 aa5.13□□□□□ -1.59
CAPN1-225ENST00000533704 BPY2O14599 106 aa5.12□□□□□ -1.59
CAPN1-225ENST00000533704 MT1FP04733 61 aa5.12□□□□□ -1.59
CAPN1-225ENST00000533704 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
CAPN1-225ENST00000533704 MRPL34Q9BQ48 92 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms