RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
CLCF1-202ENST00000533438 SS18L2Q9UHA2 77 aa6.13□□□□□ -1.43
CLCF1-202ENST00000533438 J3QR89 54 aa6.12□□□□□ -1.43
CLCF1-202ENST00000533438 PCOTHQ58A44 107 aa6.12□□□□□ -1.43
CLCF1-202ENST00000533438 ACYP1P07311 99 aa6.11□□□□□ -1.43
CLCF1-202ENST00000533438 C1orf195Q5TG92 126 aa6.11□□□□□ -1.43
CLCF1-202ENST00000533438 LINC00846Q9NV44 126 aa6.09□□□□□ -1.43
CLCF1-202ENST00000533438 K7ERU9 68 aa6.07□□□□□ -1.44
CLCF1-202ENST00000533438 NREPQ16612 68 aa6.07□□□□□ -1.44
CLCF1-202ENST00000533438 Q6ZVQ6 151 aa6.07□□□□□ -1.44
CLCF1-202ENST00000533438 Q96NJ1 140 aa6.07□□□□□ -1.44
CLCF1-202ENST00000533438 LINC00472Q9H8W2 130 aa6.07□□□□□ -1.44
CLCF1-202ENST00000533438 MT1HP80294 61 aa6.06□□□□□ -1.44
CLCF1-202ENST00000533438 UBL5Q9BZL1 73 aa6.06□□□□□ -1.44
CLCF1-202ENST00000533438 RPL37P61927 97 aaKnown RBP6.04□□□□□ -1.44
CLCF1-202ENST00000533438 J3KT08 172 aa6.02□□□□□ -1.45
CLCF1-202ENST00000533438 LORP23490 312 aaPredicted RBP6.02□□□□□ -1.45
CLCF1-202ENST00000533438 BPY2O14599 106 aa6□□□□□ -1.45
CLCF1-202ENST00000533438 IGKV4-1P06312 121 aa6□□□□□ -1.45
CLCF1-202ENST00000533438 DEFB116Q30KQ4 102 aa6□□□□□ -1.45
CLCF1-202ENST00000533438 SIGMAR1Q99720 223 aa6□□□□□ -1.45
CLCF1-202ENST00000533438 LINC00643Q86TS7 51 aa5.99□□□□□ -1.45
CLCF1-202ENST00000533438 DSCR10P59022 87 aa5.98□□□□□ -1.45
CLCF1-202ENST00000533438 CXCL6P80162 114 aa5.98□□□□□ -1.45
CLCF1-202ENST00000533438 ATP5EP2Q5VTU8 51 aa5.98□□□□□ -1.45
CLCF1-202ENST00000533438 A8MWP4 228 aa5.97□□□□□ -1.45
CLCF1-202ENST00000533438 PCP4P48539 62 aa5.96□□□□□ -1.46
CLCF1-202ENST00000533438 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
CLCF1-202ENST00000533438 NDUFB1O75438 58 aa5.95□□□□□ -1.46
CLCF1-202ENST00000533438 FLGP20930 4061 aaPredicted RBP5.95□□□□□ -1.46
CLCF1-202ENST00000533438 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
CLCF1-202ENST00000533438 A0A1B0GVX0 72 aa5.94□□□□□ -1.46
CLCF1-202ENST00000533438 PRR15Q8IV56 129 aa5.94□□□□□ -1.46
CLCF1-202ENST00000533438 K7EQZ3 153 aa5.93□□□□□ -1.46
CLCF1-202ENST00000533438 Q75L30 129 aa5.92□□□□□ -1.46
CLCF1-202ENST00000533438 IGHV6-1A0A0B4J1U7 121 aa5.91□□□□□ -1.46
CLCF1-202ENST00000533438 C8orf87E5RJ46 101 aa5.91□□□□□ -1.46
CLCF1-202ENST00000533438 COX6B2Q6YFQ2 88 aa5.91□□□□□ -1.46
CLCF1-202ENST00000533438 SVIPQ8NHG7 77 aa5.91□□□□□ -1.46
CLCF1-202ENST00000533438 Q8N9L7 120 aa5.9□□□□□ -1.46
CLCF1-202ENST00000533438 M0R2T5 61 aa5.89□□□□□ -1.47
CLCF1-202ENST00000533438 LINC00313P59037 77 aa5.89□□□□□ -1.47
CLCF1-202ENST00000533438 ATP11AUNQ6ZP68 121 aa5.89□□□□□ -1.47
CLCF1-202ENST00000533438 C8orf17Q9NRJ1 99 aa5.89□□□□□ -1.47
CLCF1-202ENST00000533438 NOTCH2NLQ7Z3S9 236 aa5.88□□□□□ -1.47
CLCF1-202ENST00000533438 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
CLCF1-202ENST00000533438 MT-ATP8P03928 68 aa5.87□□□□□ -1.47
CLCF1-202ENST00000533438 C20orf166-AS1Q96NR2 134 aa5.86□□□□□ -1.47
CLCF1-202ENST00000533438 IMUPQ9GZP8 106 aa5.86□□□□□ -1.47
CLCF1-202ENST00000533438 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
CLCF1-202ENST00000533438 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
CLCF1-202ENST00000533438 HIST1H4AP62805 103 aaKnown RBP5.85□□□□□ -1.47
CLCF1-202ENST00000533438 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
CLCF1-202ENST00000533438 HCG22E2RYF7 251 aa5.84□□□□□ -1.47
CLCF1-202ENST00000533438 hDV103S1A0JD37 113 aa5.83□□□□□ -1.48
CLCF1-202ENST00000533438 A8MUU9 505 aa5.83□□□□□ -1.48
CLCF1-202ENST00000533438 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
CLCF1-202ENST00000533438 A0A087WVE0 104 aa5.82□□□□□ -1.48
CLCF1-202ENST00000533438 CASC2Q6XLA1 102 aa5.82□□□□□ -1.48
CLCF1-202ENST00000533438 WFDC13Q8IUB5 93 aa5.81□□□□□ -1.48
CLCF1-202ENST00000533438 MRPL34Q9BQ48 92 aaKnown RBP5.81□□□□□ -1.48
CLCF1-202ENST00000533438 Q8N9P0 234 aaPredicted RBP5.8□□□□□ -1.48
CLCF1-202ENST00000533438 SSPOA2VEC9 5147 aa5.74□□□□□ -1.49
CLCF1-202ENST00000533438 SCGB1A1P11684 91 aa5.74□□□□□ -1.49
CLCF1-202ENST00000533438 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
CLCF1-202ENST00000533438 FAM236AA0A1B0GUQ0 79 aa5.72□□□□□ -1.49
CLCF1-202ENST00000533438 FAM236BA0A1B0GV22 79 aa5.72□□□□□ -1.49
CLCF1-202ENST00000533438 NDUFS5O43920 106 aa5.72□□□□□ -1.49
CLCF1-202ENST00000533438 TP53AIP1Q9HCN2 124 aa5.72□□□□□ -1.49
CLCF1-202ENST00000533438 USH2AO75445 5202 aa5.72□□□□□ -1.49
CLCF1-202ENST00000533438 MPLKIPQ8TAP9 179 aa5.69□□□□□ -1.5
CLCF1-202ENST00000533438 ZCCHC13Q8WW36 166 aaKnown RBP5.69□□□□□ -1.5
CLCF1-202ENST00000533438 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
CLCF1-202ENST00000533438 UQCRQO14949 82 aa5.67□□□□□ -1.5
CLCF1-202ENST00000533438 HRES1P13985 223 aa5.67□□□□□ -1.5
CLCF1-202ENST00000533438 FCGBPQ9Y6R7 5405 aaPredicted RBP5.67□□□□□ -1.5
CLCF1-202ENST00000533438 ATOX1O00244 68 aa5.66□□□□□ -1.5
CLCF1-202ENST00000533438 Q5W150 140 aa5.66□□□□□ -1.5
CLCF1-202ENST00000533438 SMIM20Q8N5G0 67 aa5.65□□□□□ -1.5
CLCF1-202ENST00000533438 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
CLCF1-202ENST00000533438 FAM236DA0A1B0GTK5 79 aa5.63□□□□□ -1.51
CLCF1-202ENST00000533438 FAM236CP0DP71 79 aa5.63□□□□□ -1.51
CLCF1-202ENST00000533438 RBM12B-AS1Q9P1G2 102 aa5.63□□□□□ -1.51
CLCF1-202ENST00000533438 TRAV7A0A075B6U4 112 aa5.62□□□□□ -1.51
CLCF1-202ENST00000533438 MT2AP02795 61 aa5.62□□□□□ -1.51
CLCF1-202ENST00000533438 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
CLCF1-202ENST00000533438 H0Y9P7 68 aa5.59□□□□□ -1.51
CLCF1-202ENST00000533438 MT1FP04733 61 aa5.58□□□□□ -1.52
CLCF1-202ENST00000533438 SERP2Q8N6R1 65 aa5.58□□□□□ -1.52
CLCF1-202ENST00000533438 IGKV2-30P06310 120 aa5.57□□□□□ -1.52
CLCF1-202ENST00000533438 MP68P56378 58 aa5.57□□□□□ -1.52
CLCF1-202ENST00000533438 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
CLCF1-202ENST00000533438 LOC101927531A0A1B0GV80 90 aa5.56□□□□□ -1.52
CLCF1-202ENST00000533438 H3BPC8 53 aa5.56□□□□□ -1.52
CLCF1-202ENST00000533438 SPINK7P58062 85 aa5.56□□□□□ -1.52
CLCF1-202ENST00000533438 C7orf65Q6ZTY9 151 aa5.56□□□□□ -1.52
CLCF1-202ENST00000533438 LCE2BO14633 110 aa5.55□□□□□ -1.52
CLCF1-202ENST00000533438 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
CLCF1-202ENST00000533438 IGKV2D-30A0A075B6S6 120 aa5.54□□□□□ -1.52
CLCF1-202ENST00000533438 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms