RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 GTF2H5Q6ZYL4 71 aa6.53□□□□□ -1.36
SF3B2-213ENST00000533421 Q75L30 129 aa6.52□□□□□ -1.37
SF3B2-213ENST00000533421 NOTCH2NLQ7Z3S9 236 aa6.52□□□□□ -1.37
SF3B2-213ENST00000533421 IGHV6-1A0A0B4J1U7 121 aa6.5□□□□□ -1.37
SF3B2-213ENST00000533421 PDE6GP18545 87 aa6.5□□□□□ -1.37
SF3B2-213ENST00000533421 C21orf62-AS1Q17RA5 79 aa6.48□□□□□ -1.37
SF3B2-213ENST00000533421 COX6B2Q6YFQ2 88 aa6.48□□□□□ -1.37
SF3B2-213ENST00000533421 A0A1B0GV90 55 aa6.47□□□□□ -1.37
SF3B2-213ENST00000533421 NREPQ16612 68 aa6.46□□□□□ -1.38
SF3B2-213ENST00000533421 ETDBQ3ZM63 59 aa6.46□□□□□ -1.38
SF3B2-213ENST00000533421 A0A1B0GVX0 72 aa6.45□□□□□ -1.38
SF3B2-213ENST00000533421 LINC00313P59037 77 aa6.45□□□□□ -1.38
SF3B2-213ENST00000533421 F8W1H4 67 aa6.44□□□□□ -1.38
SF3B2-213ENST00000533421 C20orf166-AS1Q96NR2 134 aa6.44□□□□□ -1.38
SF3B2-213ENST00000533421 KRTAP16-1A8MUX0 517 aa6.43□□□□□ -1.38
SF3B2-213ENST00000533421 IGKV3D-7A0A0C4DH55 119 aa6.42□□□□□ -1.38
SF3B2-213ENST00000533421 A0A1B0GW54 56 aa6.42□□□□□ -1.38
SF3B2-213ENST00000533421 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
SF3B2-213ENST00000533421 A8MUU9 505 aa6.41□□□□□ -1.38
SF3B2-213ENST00000533421 J3KT08 172 aa6.41□□□□□ -1.38
SF3B2-213ENST00000533421 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
SF3B2-213ENST00000533421 Q6ZVQ6 151 aa6.41□□□□□ -1.38
SF3B2-213ENST00000533421 FSIP2Q5CZC0 6907 aa6.4□□□□□ -1.38
SF3B2-213ENST00000533421 A8MWP4 228 aa6.4□□□□□ -1.38
SF3B2-213ENST00000533421 MT1HP80294 61 aa6.4□□□□□ -1.38
SF3B2-213ENST00000533421 LINC00846Q9NV44 126 aa6.4□□□□□ -1.38
SF3B2-213ENST00000533421 M0R2T5 61 aa6.39□□□□□ -1.39
SF3B2-213ENST00000533421 K7EQZ3 153 aa6.38□□□□□ -1.39
SF3B2-213ENST00000533421 NDUFB1O75438 58 aa6.38□□□□□ -1.39
SF3B2-213ENST00000533421 Q8N9L7 120 aa6.38□□□□□ -1.39
SF3B2-213ENST00000533421 C8orf87E5RJ46 101 aa6.37□□□□□ -1.39
SF3B2-213ENST00000533421 BPY2O14599 106 aa6.37□□□□□ -1.39
SF3B2-213ENST00000533421 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
SF3B2-213ENST00000533421 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
SF3B2-213ENST00000533421 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
SF3B2-213ENST00000533421 LCE2DQ5TA82 110 aaPredicted RBP6.34□□□□□ -1.39
SF3B2-213ENST00000533421 MMP24-AS1A0A0U1RRL7 71 aa6.33□□□□□ -1.4
SF3B2-213ENST00000533421 UBL5Q9BZL1 73 aa6.32□□□□□ -1.4
SF3B2-213ENST00000533421 WFDC13Q8IUB5 93 aa6.29□□□□□ -1.4
SF3B2-213ENST00000533421 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
SF3B2-213ENST00000533421 hDV103S1A0JD37 113 aa6.27□□□□□ -1.41
SF3B2-213ENST00000533421 RBM12B-AS1Q9P1G2 102 aa6.27□□□□□ -1.41
SF3B2-213ENST00000533421 FAM236DA0A1B0GTK5 79 aa6.26□□□□□ -1.41
SF3B2-213ENST00000533421 FAM236CP0DP71 79 aa6.26□□□□□ -1.41
SF3B2-213ENST00000533421 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
SF3B2-213ENST00000533421 Q8N9P0 234 aaPredicted RBP6.26□□□□□ -1.41
SF3B2-213ENST00000533421 TMEM254Q8TBM7 123 aa6.26□□□□□ -1.41
SF3B2-213ENST00000533421 MRPL34Q9BQ48 92 aaKnown RBP6.26□□□□□ -1.41
SF3B2-213ENST00000533421 NDUFS5O43920 106 aa6.25□□□□□ -1.41
SF3B2-213ENST00000533421 ZCCHC13Q8WW36 166 aaKnown RBP6.25□□□□□ -1.41
SF3B2-213ENST00000533421 CASC2Q6XLA1 102 aa6.23□□□□□ -1.41
SF3B2-213ENST00000533421 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
SF3B2-213ENST00000533421 HCG22E2RYF7 251 aa6.2□□□□□ -1.42
SF3B2-213ENST00000533421 ACYP1P07311 99 aa6.19□□□□□ -1.42
SF3B2-213ENST00000533421 CXCL6P80162 114 aa6.19□□□□□ -1.42
SF3B2-213ENST00000533421 FAM240AA0A1B0GVK7 77 aa6.18□□□□□ -1.42
SF3B2-213ENST00000533421 HRES1P13985 223 aa6.17□□□□□ -1.42
SF3B2-213ENST00000533421 Q5W150 140 aa6.17□□□□□ -1.42
SF3B2-213ENST00000533421 SPINK7P58062 85 aa6.16□□□□□ -1.42
SF3B2-213ENST00000533421 MPLKIPQ8TAP9 179 aa6.14□□□□□ -1.43
SF3B2-213ENST00000533421 HIST1H4AP62805 103 aaKnown RBP6.13□□□□□ -1.43
SF3B2-213ENST00000533421 IGKV2D-30A0A075B6S6 120 aa6.11□□□□□ -1.43
SF3B2-213ENST00000533421 A0A087WVE0 104 aa6.11□□□□□ -1.43
SF3B2-213ENST00000533421 IGKV2-30P06310 120 aa6.11□□□□□ -1.43
SF3B2-213ENST00000533421 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
SF3B2-213ENST00000533421 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
SF3B2-213ENST00000533421 J3QR89 54 aa6.07□□□□□ -1.44
SF3B2-213ENST00000533421 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
SF3B2-213ENST00000533421 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
SF3B2-213ENST00000533421 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
SF3B2-213ENST00000533421 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
SF3B2-213ENST00000533421 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
SF3B2-213ENST00000533421 TP53AIP1Q9HCN2 124 aa5.99□□□□□ -1.45
SF3B2-213ENST00000533421 C4orf26Q17RF5 130 aa5.98□□□□□ -1.45
SF3B2-213ENST00000533421 K7ERU9 68 aa5.97□□□□□ -1.45
SF3B2-213ENST00000533421 MT-ATP8P03928 68 aa5.97□□□□□ -1.45
SF3B2-213ENST00000533421 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
SF3B2-213ENST00000533421 MT2AP02795 61 aa5.96□□□□□ -1.46
SF3B2-213ENST00000533421 USH2AO75445 5202 aa5.95□□□□□ -1.46
SF3B2-213ENST00000533421 TRAV22A0A0B4J277 110 aa5.94□□□□□ -1.46
SF3B2-213ENST00000533421 H1FX-AS1Q4G0G2 97 aa5.94□□□□□ -1.46
SF3B2-213ENST00000533421 H0Y9P7 68 aa5.93□□□□□ -1.46
SF3B2-213ENST00000533421 UQCRQO14949 82 aa5.92□□□□□ -1.46
SF3B2-213ENST00000533421 MT1FP04733 61 aa5.9□□□□□ -1.46
SF3B2-213ENST00000533421 OCR1Q9BZK8 76 aa5.9□□□□□ -1.46
SF3B2-213ENST00000533421 CYP4F30PQ9H0H9 118 aa5.9□□□□□ -1.46
SF3B2-213ENST00000533421 KRTAP3-1Q9BYR8 98 aa5.89□□□□□ -1.47
SF3B2-213ENST00000533421 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
SF3B2-213ENST00000533421 LOC101927531A0A1B0GV80 90 aa5.86□□□□□ -1.47
SF3B2-213ENST00000533421 SCGB1A1P11684 91 aa5.86□□□□□ -1.47
SF3B2-213ENST00000533421 C1orf64Q8NEQ6 169 aa5.86□□□□□ -1.47
SF3B2-213ENST00000533421 LINC00208Q96KT6 92 aa5.86□□□□□ -1.47
SF3B2-213ENST00000533421 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
SF3B2-213ENST00000533421 FAM236AA0A1B0GUQ0 79 aa5.83□□□□□ -1.48
SF3B2-213ENST00000533421 FAM236BA0A1B0GV22 79 aa5.83□□□□□ -1.48
SF3B2-213ENST00000533421 ATOX1O00244 68 aa5.83□□□□□ -1.48
SF3B2-213ENST00000533421 KLKP1Q107X0 134 aa5.82□□□□□ -1.48
SF3B2-213ENST00000533421 IMUPQ9GZP8 106 aa5.82□□□□□ -1.48
SF3B2-213ENST00000533421 MP68P56378 58 aa5.8□□□□□ -1.48
SF3B2-213ENST00000533421 LCE2BO14633 110 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms