RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 IGLV9-49A0A0B4J1Y8 123 aa3.33□□□□□ -1.88
PCF11-205ENST00000530906 ASB16-AS1Q495Z4 193 aa3.33□□□□□ -1.88
PCF11-205ENST00000530906 CASC2Q6XLA1 102 aa3.33□□□□□ -1.88
PCF11-205ENST00000530906 LINC00336Q6ZUF6 198 aa3.33□□□□□ -1.88
PCF11-205ENST00000530906 CYSTM1Q9H1C7 97 aa3.33□□□□□ -1.88
PCF11-205ENST00000530906 TP53AIP1Q9HCN2 124 aa3.33□□□□□ -1.88
PCF11-205ENST00000530906 CDK2AP2O75956 126 aa3.32□□□□□ -1.88
PCF11-205ENST00000530906 MP68P56378 58 aa3.32□□□□□ -1.88
PCF11-205ENST00000530906 CIRBP-AS1Q8TBR5 109 aa3.32□□□□□ -1.88
PCF11-205ENST00000530906 FBN3Q75N90 2809 aa3.32□□□□□ -1.88
PCF11-205ENST00000530906 VPS13DQ5THJ4 4388 aa3.32□□□□□ -1.88
PCF11-205ENST00000530906 A0A0G2JQZ4 141 aa3.31□□□□□ -1.88
PCF11-205ENST00000530906 Q5XG85 94 aa3.31□□□□□ -1.88
PCF11-205ENST00000530906 ZCCHC13Q8WW36 166 aaKnown RBP3.31□□□□□ -1.88
PCF11-205ENST00000530906 SNURFQ9Y675 71 aa3.31□□□□□ -1.88
PCF11-205ENST00000530906 MMP24-AS1A0A0U1RRL7 71 aa3.3□□□□□ -1.88
PCF11-205ENST00000530906 A0A1B0GVX0 72 aa3.3□□□□□ -1.88
PCF11-205ENST00000530906 hDV103S1A0JD37 113 aa3.3□□□□□ -1.88
PCF11-205ENST00000530906 Q96NJ1 140 aa3.3□□□□□ -1.88
PCF11-205ENST00000530906 PRKDCP78527 4128 aaKnown RBP3.3□□□□□ -1.88
PCF11-205ENST00000530906 IGKV2D-30A0A075B6S6 120 aa3.29□□□□□ -1.88
PCF11-205ENST00000530906 WFDC13Q8IUB5 93 aa3.29□□□□□ -1.88
PCF11-205ENST00000530906 LYSTQ99698 3801 aa3.29□□□□□ -1.88
PCF11-205ENST00000530906 DNAH10Q8IVF4 4471 aa3.29□□□□□ -1.88
PCF11-205ENST00000530906 DNHD1Q96M86 4753 aa3.28□□□□□ -1.88
PCF11-205ENST00000530906 TRAV22A0A0B4J277 110 aa3.28□□□□□ -1.88
PCF11-205ENST00000530906 C8orf87E5RJ46 101 aa3.28□□□□□ -1.88
PCF11-205ENST00000530906 KRTAP10-1P60331 282 aa3.28□□□□□ -1.88
PCF11-205ENST00000530906 DEFB116Q30KQ4 102 aa3.28□□□□□ -1.88
PCF11-205ENST00000530906 SPANXA2-OT1Q8N9U9 137 aa3.28□□□□□ -1.88
PCF11-205ENST00000530906 LIMD2Q9BT23 127 aa3.28□□□□□ -1.88
PCF11-205ENST00000530906 C8orf17Q9NRJ1 99 aa3.28□□□□□ -1.88
PCF11-205ENST00000530906 DNAH6Q9C0G6 4158 aa3.28□□□□□ -1.88
PCF11-205ENST00000530906 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
PCF11-205ENST00000530906 CYP4F30PQ9H0H9 118 aa3.27□□□□□ -1.89
PCF11-205ENST00000530906 TGP01266 2768 aa3.27□□□□□ -1.89
PCF11-205ENST00000530906 H0Y9P7 68 aa3.26□□□□□ -1.89
PCF11-205ENST00000530906 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
PCF11-205ENST00000530906 ALMS1Q8TCU4 4167 aa3.25□□□□□ -1.89
PCF11-205ENST00000530906 SPINK6Q6UWN8 80 aa3.25□□□□□ -1.89
PCF11-205ENST00000530906 LINC00208Q96KT6 92 aa3.25□□□□□ -1.89
PCF11-205ENST00000530906 MRPL34Q9BQ48 92 aaKnown RBP3.25□□□□□ -1.89
PCF11-205ENST00000530906 HECTD4Q9Y4D8 3996 aa3.24□□□□□ -1.89
PCF11-205ENST00000530906 IGHV6-1A0A0B4J1U7 121 aa3.24□□□□□ -1.89
PCF11-205ENST00000530906 HRCT1Q6UXD1 115 aa3.24□□□□□ -1.89
PCF11-205ENST00000530906 C1orf64Q8NEQ6 169 aa3.24□□□□□ -1.89
PCF11-205ENST00000530906 ANAPC11Q9NYG5 84 aa3.24□□□□□ -1.89
PCF11-205ENST00000530906 DNAH17Q9UFH2 4485 aa3.24□□□□□ -1.89
PCF11-205ENST00000530906 SPINK1P00995 79 aa3.23□□□□□ -1.89
PCF11-205ENST00000530906 KRTAP1-4P0C5Y4 121 aa3.23□□□□□ -1.89
PCF11-205ENST00000530906 SPAG11AQ6PDA7 123 aa3.23□□□□□ -1.89
PCF11-205ENST00000530906 SRRM2Q9UQ35 2752 aaKnown RBP3.23□□□□□ -1.89
PCF11-205ENST00000530906 LOC101927531A0A1B0GV80 90 aa3.22□□□□□ -1.89
PCF11-205ENST00000530906 OXTP01178 125 aa3.22□□□□□ -1.89
PCF11-205ENST00000530906 KRTAP13-2Q52LG2 175 aa3.22□□□□□ -1.89
PCF11-205ENST00000530906 KMT2AQ03164 3969 aa3.21□□□□□ -1.9
PCF11-205ENST00000530906 A0A087X002 238 aa3.21□□□□□ -1.9
PCF11-205ENST00000530906 IGLV7-46A0A075B6I9 117 aa3.2□□□□□ -1.9
PCF11-205ENST00000530906 A0A1B0GVY2 172 aa3.2□□□□□ -1.9
PCF11-205ENST00000530906 NDUFS5O43920 106 aa3.2□□□□□ -1.9
PCF11-205ENST00000530906 LINC00313P59037 77 aa3.2□□□□□ -1.9
PCF11-205ENST00000530906 C1orf195Q5TG92 126 aa3.2□□□□□ -1.9
PCF11-205ENST00000530906 TYMSOSQ8TAI1 123 aa3.2□□□□□ -1.9
PCF11-205ENST00000530906 V9GYY9 64 aa3.2□□□□□ -1.9
PCF11-205ENST00000530906 DNAH2Q9P225 4427 aa3.19□□□□□ -1.9
PCF11-205ENST00000530906 LINC00304Q8N9R0 145 aa3.18□□□□□ -1.9
PCF11-205ENST00000530906 SVIPQ8NHG7 77 aa3.18□□□□□ -1.9
PCF11-205ENST00000530906 Q1T7F1 81 aa3.17□□□□□ -1.9
PCF11-205ENST00000530906 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
PCF11-205ENST00000530906 FP248Q71RG6 208 aaPredicted RBP3.17□□□□□ -1.9
PCF11-205ENST00000530906 NOTCH2NLQ7Z3S9 236 aa3.16□□□□□ -1.9
PCF11-205ENST00000530906 FRAS1Q86XX4 4008 aa3.16□□□□□ -1.9
PCF11-205ENST00000530906 DNAH8Q96JB1 4490 aa3.15□□□□□ -1.9
PCF11-205ENST00000530906 DNAH5Q8TE73 4624 aa3.15□□□□□ -1.91
PCF11-205ENST00000530906 KRTAP16-1A8MUX0 517 aa3.14□□□□□ -1.91
PCF11-205ENST00000530906 C4orf26Q17RF5 130 aa3.14□□□□□ -1.91
PCF11-205ENST00000530906 DNAH11Q96DT5 4516 aa3.13□□□□□ -1.91
PCF11-205ENST00000530906 MT3P25713 68 aa3.13□□□□□ -1.91
PCF11-205ENST00000530906 KRTAP10-4P60372 401 aaPredicted RBP3.13□□□□□ -1.91
PCF11-205ENST00000530906 PKD1P98161 4303 aa3.12□□□□□ -1.91
PCF11-205ENST00000530906 PRR4Q16378 134 aa3.12□□□□□ -1.91
PCF11-205ENST00000530906 PCOTHQ58A44 107 aa3.12□□□□□ -1.91
PCF11-205ENST00000530906 Q5W150 140 aa3.12□□□□□ -1.91
PCF11-205ENST00000530906 COA5Q86WW8 74 aa3.12□□□□□ -1.91
PCF11-205ENST00000530906 PRR26Q8N8Z3 221 aa3.12□□□□□ -1.91
PCF11-205ENST00000530906 MPLKIPQ8TAP9 179 aa3.12□□□□□ -1.91
PCF11-205ENST00000530906 ACYP2P14621 99 aa3.11□□□□□ -1.91
PCF11-205ENST00000530906 DMAC1Q96GE9 116 aa3.11□□□□□ -1.91
PCF11-205ENST00000530906 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
PCF11-205ENST00000530906 FAT2Q9NYQ8 4349 aa3.1□□□□□ -1.91
PCF11-205ENST00000530906 SMR3BP02814 79 aaPredicted RBP3.09□□□□□ -1.91
PCF11-205ENST00000530906 C20orf166-AS1Q96NR2 134 aa3.09□□□□□ -1.91
PCF11-205ENST00000530906 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
PCF11-205ENST00000530906 A8MUN3 132 aa3.08□□□□□ -1.92
PCF11-205ENST00000530906 HRES1P13985 223 aa3.08□□□□□ -1.92
PCF11-205ENST00000530906 C7orf65Q6ZTY9 151 aa3.08□□□□□ -1.92
PCF11-205ENST00000530906 LRP1BQ9NZR2 4599 aa3.07□□□□□ -1.92
PCF11-205ENST00000530906 A8MUU9 505 aa3.07□□□□□ -1.92
PCF11-205ENST00000530906 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
PCF11-205ENST00000530906 LINC01558Q9Y6Z2 57 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms