RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 TEX15Q9BXT5 2789 aa0.36□□□□□ -2.35
CAPRIN1-208ENST00000530008 PDZD2O15018 2839 aa0.36□□□□□ -2.35
CAPRIN1-208ENST00000530008 RIF1Q5UIP0 2472 aaKnown RBP0.36□□□□□ -2.35
CAPRIN1-208ENST00000530008 DSPP15924 2871 aaKnown RBP0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 PRRC2CQ9Y520 2896 aaKnown RBP0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 TENM4Q6N022 2769 aa0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 SPTA1P02549 2419 aa0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 NFAT5O94916 1531 aa0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 TOP2AP11388 1531 aaKnown RBP0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 PLNP26678 52 aa0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 LYSTQ99698 3801 aa0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 CMC2Q9NRP2 79 aa0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 C6orf48Q9UBA6 75 aa0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 GCN1Q92616 2671 aaKnown RBP0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 MXRA5Q9NR99 2828 aa0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 ZANQ9Y493 2812 aa0.35□□□□□ -2.35
CAPRIN1-208ENST00000530008 ATRQ13535 2644 aa0.34□□□□□ -2.35
CAPRIN1-208ENST00000530008 PTPN13Q12923 2485 aa0.34□□□□□ -2.36
CAPRIN1-208ENST00000530008 IQGAP2Q13576 1575 aa0.34□□□□□ -2.36
CAPRIN1-208ENST00000530008 CCDC168Q8NDH2 2452 aa0.34□□□□□ -2.36
CAPRIN1-208ENST00000530008 HECTD1Q9ULT8 2610 aa0.34□□□□□ -2.36
CAPRIN1-208ENST00000530008 NBASA2RRP1 2371 aa0.34□□□□□ -2.36
CAPRIN1-208ENST00000530008 KIAA1109Q2LD37 5005 aa0.34□□□□□ -2.36
CAPRIN1-208ENST00000530008 FAM208AQ9UK61 1670 aaKnown RBP0.33□□□□□ -2.36
CAPRIN1-208ENST00000530008 TLN1Q9Y490 2541 aaKnown RBP0.33□□□□□ -2.36
CAPRIN1-208ENST00000530008 HUWE1Q7Z6Z7 4374 aaKnown RBP0.33□□□□□ -2.36
CAPRIN1-208ENST00000530008 CREBBPQ92793 2442 aa0.33□□□□□ -2.36
CAPRIN1-208ENST00000530008 FLNBO75369 2602 aaKnown RBP0.33□□□□□ -2.36
CAPRIN1-208ENST00000530008 SMIM27A0A1W2PRY6 76 aa0.33□□□□□ -2.36
CAPRIN1-208ENST00000530008 TFF3Q07654 80 aa0.33□□□□□ -2.36
CAPRIN1-208ENST00000530008 TIMM8BQ9Y5J9 83 aaPredicted RBP0.33□□□□□ -2.36
CAPRIN1-208ENST00000530008 S4R3F8 94 aa0.33□□□□□ -2.36
CAPRIN1-208ENST00000530008 PKD1L2Q7Z442 2459 aa0.33□□□□□ -2.36
CAPRIN1-208ENST00000530008 HMCN2Q8NDA2 5059 aa0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 TRANK1O15050 2925 aa0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 NBEAQ8NFP9 2946 aa0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 PKD1L1Q8TDX9 2849 aa0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 LINC01546A6NGU7 62 aa0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 H0YGX0 51 aa0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 WT1-ASQ06250 92 aa0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 FASNP49327 2511 aaKnown RBP0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 TNRC18O15417 2968 aaPredicted RBP0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 WNK1Q9H4A3 2382 aa0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 SONP18583 2426 aaKnown RBP0.32□□□□□ -2.36
CAPRIN1-208ENST00000530008 MYCBP2O75592 4640 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 SSPOA2VEC9 5147 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 CRYBG3Q68DQ2 2970 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 ACANP16112 2415 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 EP300Q09472 2414 aaPredicted RBP0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 DMBT1Q9UGM3 2413 aaPredicted RBP0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 M0R2T5 61 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 DEFB135Q30KP9 77 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 DEFB106AQ8N104 65 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 TMEM167BQ9NRX6 74 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 ABRACLQ9P1F3 81 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 RYR1P21817 5038 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 LRBAP50851 2863 aa0.31□□□□□ -2.36
CAPRIN1-208ENST00000530008 SPTAN1Q13813 2472 aaKnown RBP0.3□□□□□ -2.36
CAPRIN1-208ENST00000530008 TENM2Q9NT68 2774 aa0.3□□□□□ -2.36
CAPRIN1-208ENST00000530008 MGAM2Q2M2H8 2515 aa0.3□□□□□ -2.36
CAPRIN1-208ENST00000530008 TLN2Q9Y4G6 2542 aa0.3□□□□□ -2.36
CAPRIN1-208ENST00000530008 KMT2AQ03164 3969 aa0.3□□□□□ -2.36
CAPRIN1-208ENST00000530008 TOMM5Q8N4H5 51 aa0.3□□□□□ -2.36
CAPRIN1-208ENST00000530008 KIF21BO75037 1637 aa0.3□□□□□ -2.36
CAPRIN1-208ENST00000530008 DCHS2Q6V1P9 2916 aa0.29□□□□□ -2.36
CAPRIN1-208ENST00000530008 KMT2CQ8NEZ4 4911 aaKnown RBP0.29□□□□□ -2.36
CAPRIN1-208ENST00000530008 PRLHP81277 87 aa0.28□□□□□ -2.36
CAPRIN1-208ENST00000530008 APC2O95996 2303 aa0.28□□□□□ -2.36
CAPRIN1-208ENST00000530008 HRNRQ86YZ3 2850 aaPredicted RBP0.27□□□□□ -2.37
CAPRIN1-208ENST00000530008 ACACBO00763 2458 aa0.27□□□□□ -2.37
CAPRIN1-208ENST00000530008 LPAP08519 4548 aa0.26□□□□□ -2.37
CAPRIN1-208ENST00000530008 VPS13BQ7Z7G8 4022 aa0.26□□□□□ -2.37
CAPRIN1-208ENST00000530008 KAAG1Q9UBP8 84 aa0.26□□□□□ -2.37
CAPRIN1-208ENST00000530008 LRP1BQ9NZR2 4599 aa0.26□□□□□ -2.37
CAPRIN1-208ENST00000530008 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
CAPRIN1-208ENST00000530008 CEP250Q9BV73 2442 aa0.25□□□□□ -2.37
CAPRIN1-208ENST00000530008 SACSQ9NZJ4 4579 aa0.25□□□□□ -2.37
CAPRIN1-208ENST00000530008 H0YGG7 62 aa0.25□□□□□ -2.37
CAPRIN1-208ENST00000530008 SPRR2DP22532 72 aa0.25□□□□□ -2.37
CAPRIN1-208ENST00000530008 WFDC10BQ8IUB3 73 aa0.25□□□□□ -2.37
CAPRIN1-208ENST00000530008 RYR2Q92736 4967 aa0.25□□□□□ -2.37
CAPRIN1-208ENST00000530008 TACC2O95359 2948 aa0.24□□□□□ -2.37
CAPRIN1-208ENST00000530008 ZZEF1O43149 2961 aa0.24□□□□□ -2.37
CAPRIN1-208ENST00000530008 SMIM2Q9BVW6 85 aa0.24□□□□□ -2.37
CAPRIN1-208ENST00000530008 CLTCL1P53675 1640 aa0.24□□□□□ -2.37
CAPRIN1-208ENST00000530008 ATP7AQ04656 1500 aa0.23□□□□□ -2.37
CAPRIN1-208ENST00000530008 HSPG2P98160 4391 aa0.23□□□□□ -2.37
CAPRIN1-208ENST00000530008 PKD1P98161 4303 aa0.23□□□□□ -2.37
CAPRIN1-208ENST00000530008 A0A0C4DFX4 3053 aa0.23□□□□□ -2.37
CAPRIN1-208ENST00000530008 DMXL2Q8TDJ6 3036 aa0.23□□□□□ -2.37
CAPRIN1-208ENST00000530008 DNAH11Q96DT5 4516 aa0.23□□□□□ -2.37
CAPRIN1-208ENST00000530008 SPG11Q96JI7 2443 aa0.23□□□□□ -2.37
CAPRIN1-208ENST00000530008 HECTD4Q9Y4D8 3996 aa0.22□□□□□ -2.37
CAPRIN1-208ENST00000530008 BOD1L1Q8NFC6 3051 aa0.22□□□□□ -2.37
CAPRIN1-208ENST00000530008 CUBNO60494 3623 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 KALRNO60229 2985 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 PKHD1L1Q86WI1 4243 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 IGLV5-48A0A075B6I7 105 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 MMP24-AS1A0A0U1RRL7 71 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 H3BUA1 57 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms