RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, human

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN1-208	ENST00000530008	TEX15	Q9BXT5	2789 aa		0.36	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	PDZD2	O15018	2839 aa		0.36	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	RIF1	Q5UIP0	2472 aa	Known RBP	0.36	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	DSP	P15924	2871 aa	Known RBP	0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	PRRC2C	Q9Y520	2896 aa	Known RBP	0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	TENM4	Q6N022	2769 aa		0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	SPTA1	P02549	2419 aa		0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	NFAT5	O94916	1531 aa		0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	TOP2A	P11388	1531 aa	Known RBP	0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	PLN	P26678	52 aa		0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	LYST	Q99698	3801 aa		0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	CMC2	Q9NRP2	79 aa		0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	C6orf48	Q9UBA6	75 aa		0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	GCN1	Q92616	2671 aa	Known RBP	0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	MXRA5	Q9NR99	2828 aa		0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	ZAN	Q9Y493	2812 aa		0.35	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	ATR	Q13535	2644 aa		0.34	□□□□□ -2.35
CAPRIN1-208	ENST00000530008	PTPN13	Q12923	2485 aa		0.34	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	IQGAP2	Q13576	1575 aa		0.34	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	CCDC168	Q8NDH2	2452 aa		0.34	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	HECTD1	Q9ULT8	2610 aa		0.34	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	NBAS	A2RRP1	2371 aa		0.34	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	KIAA1109	Q2LD37	5005 aa		0.34	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	FAM208A	Q9UK61	1670 aa	Known RBP	0.33	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	TLN1	Q9Y490	2541 aa	Known RBP	0.33	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.33	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	CREBBP	Q92793	2442 aa		0.33	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	FLNB	O75369	2602 aa	Known RBP	0.33	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	SMIM27	A0A1W2PRY6	76 aa		0.33	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	TFF3	Q07654	80 aa		0.33	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	0.33	□□□□□ -2.36
CAPRIN1-208	ENST00000530008		S4R3F8	94 aa		0.33	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	PKD1L2	Q7Z442	2459 aa		0.33	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	HMCN2	Q8NDA2	5059 aa		0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	TRANK1	O15050	2925 aa		0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	NBEA	Q8NFP9	2946 aa		0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	PKD1L1	Q8TDX9	2849 aa		0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	LINC01546	A6NGU7	62 aa		0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008		H0YGX0	51 aa		0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	WT1-AS	Q06250	92 aa		0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	FASN	P49327	2511 aa	Known RBP	0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	TNRC18	O15417	2968 aa	Predicted RBP	0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	WNK1	Q9H4A3	2382 aa		0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	SON	P18583	2426 aa	Known RBP	0.32	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	MYCBP2	O75592	4640 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	SSPO	A2VEC9	5147 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	CRYBG3	Q68DQ2	2970 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	ACAN	P16112	2415 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	EP300	Q09472	2414 aa	Predicted RBP	0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008		M0R2T5	61 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	DEFB135	Q30KP9	77 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	DEFB106A	Q8N104	65 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	TMEM167B	Q9NRX6	74 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	ABRACL	Q9P1F3	81 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	RYR1	P21817	5038 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	LRBA	P50851	2863 aa		0.31	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	SPTAN1	Q13813	2472 aa	Known RBP	0.3	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	TENM2	Q9NT68	2774 aa		0.3	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	MGAM2	Q2M2H8	2515 aa		0.3	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	TLN2	Q9Y4G6	2542 aa		0.3	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	KMT2A	Q03164	3969 aa		0.3	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	TOMM5	Q8N4H5	51 aa		0.3	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	KIF21B	O75037	1637 aa		0.3	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	DCHS2	Q6V1P9	2916 aa		0.29	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	KMT2C	Q8NEZ4	4911 aa	Known RBP	0.29	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	PRLH	P81277	87 aa		0.28	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	APC2	O95996	2303 aa		0.28	□□□□□ -2.36
CAPRIN1-208	ENST00000530008	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.27	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	ACACB	O00763	2458 aa		0.27	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	LPA	P08519	4548 aa		0.26	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	VPS13B	Q7Z7G8	4022 aa		0.26	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	KAAG1	Q9UBP8	84 aa		0.26	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	LRP1B	Q9NZR2	4599 aa		0.26	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	COL7A1	Q02388	2944 aa		0.25	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	CEP250	Q9BV73	2442 aa		0.25	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	SACS	Q9NZJ4	4579 aa		0.25	□□□□□ -2.37
CAPRIN1-208	ENST00000530008		H0YGG7	62 aa		0.25	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	SPRR2D	P22532	72 aa		0.25	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	WFDC10B	Q8IUB3	73 aa		0.25	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	RYR2	Q92736	4967 aa		0.25	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	TACC2	O95359	2948 aa		0.24	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	ZZEF1	O43149	2961 aa		0.24	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	SMIM2	Q9BVW6	85 aa		0.24	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	CLTCL1	P53675	1640 aa		0.24	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	ATP7A	Q04656	1500 aa		0.23	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	HSPG2	P98160	4391 aa		0.23	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	PKD1	P98161	4303 aa		0.23	□□□□□ -2.37
CAPRIN1-208	ENST00000530008		A0A0C4DFX4	3053 aa		0.23	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	DMXL2	Q8TDJ6	3036 aa		0.23	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	DNAH11	Q96DT5	4516 aa		0.23	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	SPG11	Q96JI7	2443 aa		0.23	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	HECTD4	Q9Y4D8	3996 aa		0.22	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	BOD1L1	Q8NFC6	3051 aa		0.22	□□□□□ -2.37
CAPRIN1-208	ENST00000530008	CUBN	O60494	3623 aa		0.21	□□□□□ -2.38
CAPRIN1-208	ENST00000530008	KALRN	O60229	2985 aa		0.21	□□□□□ -2.38
CAPRIN1-208	ENST00000530008	PKHD1L1	Q86WI1	4243 aa		0.21	□□□□□ -2.38
CAPRIN1-208	ENST00000530008	IGLV5-48	A0A075B6I7	105 aa		0.21	□□□□□ -2.38
CAPRIN1-208	ENST00000530008	MMP24-AS1	A0A0U1RRL7	71 aa		0.21	□□□□□ -2.38
CAPRIN1-208	ENST00000530008		H3BUA1	57 aa		0.21	□□□□□ -2.38

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