RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 KRTAP10-4P60372 401 aaPredicted RBP1.14□□□□□ -2.23
SVIP-203ENST00000529848 ALMS1Q8TCU4 4167 aa1.13□□□□□ -2.23
SVIP-203ENST00000529848 PRKDCP78527 4128 aaKnown RBP1.13□□□□□ -2.23
SVIP-203ENST00000529848 LOC110117498A0A087WWA1 95 aa1.13□□□□□ -2.23
SVIP-203ENST00000529848 A0A096LNT2 108 aa1.13□□□□□ -2.23
SVIP-203ENST00000529848 I3L3M4 83 aa1.13□□□□□ -2.23
SVIP-203ENST00000529848 CCL22O00626 93 aa1.13□□□□□ -2.23
SVIP-203ENST00000529848 PIN1P1O15428 100 aa1.13□□□□□ -2.23
SVIP-203ENST00000529848 FXYD4P59646 89 aa1.13□□□□□ -2.23
SVIP-203ENST00000529848 SNRPGP62308 76 aaKnown RBP1.13□□□□□ -2.23
SVIP-203ENST00000529848 WNK1Q9H4A3 2382 aa1.13□□□□□ -2.23
SVIP-203ENST00000529848 ROS1P08922 2347 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 MEGF8Q7Z7M0 2845 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 ZANQ9Y493 2812 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 TNCP24821 2201 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 LINC01546A6NGU7 62 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 NDUFA4O00483 81 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 SPINK4O60575 86 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 PLNP26678 52 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 DEFB112Q30KQ8 113 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 GAFA1Q96PS6 74 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 UBL5Q9BZL1 73 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 TMEM14CQ9P0S9 112 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 NOTCH1P46531 2555 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 TRRAPQ9Y4A5 3859 aa1.12□□□□□ -2.23
SVIP-203ENST00000529848 TGP01266 2768 aa1.11□□□□□ -2.23
SVIP-203ENST00000529848 MAP1AP78559 2803 aaPredicted RBP1.11□□□□□ -2.23
SVIP-203ENST00000529848 INE1O15225 51 aa1.11□□□□□ -2.23
SVIP-203ENST00000529848 SERF2P84101 59 aa1.11□□□□□ -2.23
SVIP-203ENST00000529848 PLCE1Q9P212 2302 aa1.1□□□□□ -2.23
SVIP-203ENST00000529848 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
SVIP-203ENST00000529848 FLG2Q5D862 2391 aaPredicted RBP1.1□□□□□ -2.23
SVIP-203ENST00000529848 ACYP2P14621 99 aa1.1□□□□□ -2.23
SVIP-203ENST00000529848 COX17Q14061 63 aa1.1□□□□□ -2.23
SVIP-203ENST00000529848 TIMM8BQ9Y5J9 83 aaPredicted RBP1.1□□□□□ -2.23
SVIP-203ENST00000529848 KMT2CQ8NEZ4 4911 aaKnown RBP1.1□□□□□ -2.23
SVIP-203ENST00000529848 PKD1L1Q8TDX9 2849 aa1.1□□□□□ -2.23
SVIP-203ENST00000529848 RYR3Q15413 4870 aa1.09□□□□□ -2.23
SVIP-203ENST00000529848 BIRC6Q9NR09 4857 aa1.09□□□□□ -2.23
SVIP-203ENST00000529848 A0A1B0GU69 56 aa1.09□□□□□ -2.23
SVIP-203ENST00000529848 G3V318 75 aa1.09□□□□□ -2.23
SVIP-203ENST00000529848 M0R2N4 97 aa1.09□□□□□ -2.23
SVIP-203ENST00000529848 CMYA5Q8N3K9 4069 aa1.09□□□□□ -2.24
SVIP-203ENST00000529848 TENM1Q9UKZ4 2725 aa1.09□□□□□ -2.24
SVIP-203ENST00000529848 EPPK1P58107 5090 aaKnown RBP1.08□□□□□ -2.24
SVIP-203ENST00000529848 WNK2Q9Y3S1 2297 aa1.08□□□□□ -2.24
SVIP-203ENST00000529848 COX7BP24311 80 aa1.08□□□□□ -2.24
SVIP-203ENST00000529848 KCNQ1DNQ9H478 68 aa1.08□□□□□ -2.24
SVIP-203ENST00000529848 NBEAL2Q6ZNJ1 2754 aa1.08□□□□□ -2.24
SVIP-203ENST00000529848 LYNX1G3V0Z9 82 aa1.07□□□□□ -2.24
SVIP-203ENST00000529848 NDUFA3O95167 84 aa1.07□□□□□ -2.24
SVIP-203ENST00000529848 FXYD6P3P58550 94 aa1.07□□□□□ -2.24
SVIP-203ENST00000529848 DEFB114Q30KQ6 69 aa1.07□□□□□ -2.24
SVIP-203ENST00000529848 DYNC2H1Q8NCM8 4307 aaKnown RBP1.07□□□□□ -2.24
SVIP-203ENST00000529848 RYR2Q92736 4967 aa1.06□□□□□ -2.24
SVIP-203ENST00000529848 VWFP04275 2813 aa1.06□□□□□ -2.24
SVIP-203ENST00000529848 GVQW2A0A096LPI5 108 aaPredicted RBP1.06□□□□□ -2.24
SVIP-203ENST00000529848 ETDCA0A1B0GVM5 59 aa1.06□□□□□ -2.24
SVIP-203ENST00000529848 K7EIL1 84 aa1.06□□□□□ -2.24
SVIP-203ENST00000529848 NCR3O14931 201 aa1.06□□□□□ -2.24
SVIP-203ENST00000529848 MRPL33O75394 65 aaKnown RBP1.06□□□□□ -2.24
SVIP-203ENST00000529848 HAMPP81172 84 aa1.06□□□□□ -2.24
SVIP-203ENST00000529848 DEFB108BQ8NET1 73 aa1.06□□□□□ -2.24
SVIP-203ENST00000529848 HYDINQ4G0P3 5121 aa1.05□□□□□ -2.24
SVIP-203ENST00000529848 PCLOQ9Y6V0 5065 aa1.05□□□□□ -2.24
SVIP-203ENST00000529848 CPSF4LA6NMK7 179 aaKnown RBP1.05□□□□□ -2.24
SVIP-203ENST00000529848 CRIP1P50238 77 aa1.05□□□□□ -2.24
SVIP-203ENST00000529848 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.05□□□□□ -2.24
SVIP-203ENST00000529848 Q6ZQY7 126 aa1.05□□□□□ -2.24
SVIP-203ENST00000529848 Q6ZRX8 168 aa1.05□□□□□ -2.24
SVIP-203ENST00000529848 SSBP3-AS1Q7Z2R9 100 aa1.05□□□□□ -2.24
SVIP-203ENST00000529848 DNAH1Q9P2D7 4330 aa1.05□□□□□ -2.24
SVIP-203ENST00000529848 DNAH3Q8TD57 4116 aa1.04□□□□□ -2.24
SVIP-203ENST00000529848 LY6G6CO95867 125 aa1.04□□□□□ -2.24
SVIP-203ENST00000529848 PLAC4Q8WY50 150 aa1.04□□□□□ -2.24
SVIP-203ENST00000529848 DNAH9Q9NYC9 4486 aa1.04□□□□□ -2.24
SVIP-203ENST00000529848 SACSQ9NZJ4 4579 aa1.03□□□□□ -2.24
SVIP-203ENST00000529848 LYSTQ99698 3801 aa1.03□□□□□ -2.24
SVIP-203ENST00000529848 C10orf99Q6UWK7 81 aa1.03□□□□□ -2.24
SVIP-203ENST00000529848 SMIM11BQ8TCY0 68 aa1.03□□□□□ -2.24
SVIP-203ENST00000529848 CRIPTQ9P021 101 aa1.03□□□□□ -2.24
SVIP-203ENST00000529848 TENM3Q9P273 2699 aa1.03□□□□□ -2.24
SVIP-203ENST00000529848 TENM2Q9NT68 2774 aa1.03□□□□□ -2.24
SVIP-203ENST00000529848 H0YGX0 51 aa1.02□□□□□ -2.25
SVIP-203ENST00000529848 H3BUX3 64 aa1.02□□□□□ -2.25
SVIP-203ENST00000529848 HERC2O95714 4834 aa1.02□□□□□ -2.25
SVIP-203ENST00000529848 RPS27LQ71UM5 84 aaKnown RBP1.02□□□□□ -2.25
SVIP-203ENST00000529848 DNAH7Q8WXX0 4024 aa1.02□□□□□ -2.25
SVIP-203ENST00000529848 STAB2Q8WWQ8 2551 aa1.01□□□□□ -2.25
SVIP-203ENST00000529848 DEFB131BA0A096LNP1 70 aa1.01□□□□□ -2.25
SVIP-203ENST00000529848 RPL38P63173 70 aaKnown RBP1.01□□□□□ -2.25
SVIP-203ENST00000529848 TMEM167BQ9NRX6 74 aa1.01□□□□□ -2.25
SVIP-203ENST00000529848 HUWE1Q7Z6Z7 4374 aaKnown RBP1.01□□□□□ -2.25
SVIP-203ENST00000529848 HECTD4Q9Y4D8 3996 aa1□□□□□ -2.25
SVIP-203ENST00000529848 STARD9Q9P2P6 4700 aa1□□□□□ -2.25
SVIP-203ENST00000529848 COL7A1Q02388 2944 aa1□□□□□ -2.25
SVIP-203ENST00000529848 LINC00158P58513 81 aa1□□□□□ -2.25
SVIP-203ENST00000529848 PRB3Q04118 309 aaPredicted RBP1□□□□□ -2.25
SVIP-203ENST00000529848 CDKN2A-AS1Q9UH64 79 aa1□□□□□ -2.25
SVIP-203ENST00000529848 FRAS1Q86XX4 4008 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms