RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 RBM3P98179 157 aaKnown RBP1.97□□□□□ -2.09
PTPRC-213ENST00000529828 KRTAP19-2Q3LHN2 52 aa1.97□□□□□ -2.09
PTPRC-213ENST00000529828 Q8IZM0 81 aa1.97□□□□□ -2.09
PTPRC-213ENST00000529828 Q8NBF4 154 aa1.97□□□□□ -2.09
PTPRC-213ENST00000529828 HIGD2AQ9BW72 106 aa1.97□□□□□ -2.09
PTPRC-213ENST00000529828 CYSTM1Q9H1C7 97 aa1.97□□□□□ -2.09
PTPRC-213ENST00000529828 FCGBPQ9Y6R7 5405 aaPredicted RBP1.97□□□□□ -2.09
PTPRC-213ENST00000529828 TRAV13-2A0A0B4J235 113 aa1.96□□□□□ -2.1
PTPRC-213ENST00000529828 TRBV10-2A0A0K0K1G8 114 aa1.96□□□□□ -2.1
PTPRC-213ENST00000529828 H3BQ85 93 aa1.96□□□□□ -2.1
PTPRC-213ENST00000529828 KRTAP10-6P60371 365 aaPredicted RBP1.96□□□□□ -2.1
PTPRC-213ENST00000529828 CDKN2A-AS1Q9UH64 79 aa1.96□□□□□ -2.1
PTPRC-213ENST00000529828 A0A0B4J2C4 111 aa1.96□□□□□ -2.1
PTPRC-213ENST00000529828 LOC107984156A0A0G2JMH3 177 aa1.96□□□□□ -2.1
PTPRC-213ENST00000529828 ARL17AQ8IVW1 177 aa1.96□□□□□ -2.1
PTPRC-213ENST00000529828 IGLV5-37A0A075B6J1 123 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 C11orf86A6NJI1 115 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 CFC1BP0CG36 223 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 ATXN8Q156A1 80 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 SPAG11AQ6PDA7 123 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 C2orf66Q6UXQ4 117 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 ZNF706Q9Y5V0 76 aaPredicted RBP1.95□□□□□ -2.1
PTPRC-213ENST00000529828 MACF1Q9UPN3 7388 aaKnown RBP1.95□□□□□ -2.1
PTPRC-213ENST00000529828 SMIM1B2RUZ4 78 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 M0R2T5 61 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 KRTAP15-1Q3LI76 137 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 Q8NDZ9 215 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 COX7B2Q8TF08 81 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 SPRR4Q96PI1 79 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 AMELXQ99217 191 aa1.95□□□□□ -2.1
PTPRC-213ENST00000529828 IGLV8-61A0A075B6I0 122 aa1.94□□□□□ -2.1
PTPRC-213ENST00000529828 IGLV9-49A0A0B4J1Y8 123 aa1.94□□□□□ -2.1
PTPRC-213ENST00000529828 TEX49A0A1B0GTD5 131 aa1.94□□□□□ -2.1
PTPRC-213ENST00000529828 A6NN06 94 aa1.94□□□□□ -2.1
PTPRC-213ENST00000529828 PCOTHQ58A44 107 aa1.94□□□□□ -2.1
PTPRC-213ENST00000529828 CLEC2BQ92478 149 aa1.94□□□□□ -2.1
PTPRC-213ENST00000529828 SCGB3A1Q96QR1 104 aa1.94□□□□□ -2.1
PTPRC-213ENST00000529828 Q6JHZ5 121 aa1.94□□□□□ -2.1
PTPRC-213ENST00000529828 NDUFA12Q9UI09 145 aa1.94□□□□□ -2.1
PTPRC-213ENST00000529828 TRAV7A0A075B6U4 112 aa1.93□□□□□ -2.1
PTPRC-213ENST00000529828 IGLV5-45A0A087WSX0 123 aa1.93□□□□□ -2.1
PTPRC-213ENST00000529828 IGIPA6NJ69 53 aa1.93□□□□□ -2.1
PTPRC-213ENST00000529828 LEPROTO15243 131 aa1.93□□□□□ -2.1
PTPRC-213ENST00000529828 MOBPQ13875 183 aa1.93□□□□□ -2.1
PTPRC-213ENST00000529828 S100A7L2Q5SY68 101 aa1.93□□□□□ -2.1
PTPRC-213ENST00000529828 ATP5EP2Q5VTU8 51 aa1.93□□□□□ -2.1
PTPRC-213ENST00000529828 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
PTPRC-213ENST00000529828 Q8N377 158 aa1.93□□□□□ -2.1
PTPRC-213ENST00000529828 FAM218AQ96MZ4 157 aa1.93□□□□□ -2.1
PTPRC-213ENST00000529828 C9orf92A6NGG3 77 aa1.92□□□□□ -2.1
PTPRC-213ENST00000529828 SPINK1P00995 79 aa1.92□□□□□ -2.1
PTPRC-213ENST00000529828 SOSTDC1Q6X4U4 206 aa1.92□□□□□ -2.1
PTPRC-213ENST00000529828 C20orf197Q8N268 126 aa1.92□□□□□ -2.1
PTPRC-213ENST00000529828 MPLKIPQ8TAP9 179 aa1.92□□□□□ -2.1
PTPRC-213ENST00000529828 ZNF625Q96I27 306 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-213ENST00000529828 CYP4F30PQ9H0H9 118 aa1.92□□□□□ -2.1
PTPRC-213ENST00000529828 SND1-IT1Q9HBX3 110 aa1.92□□□□□ -2.1
PTPRC-213ENST00000529828 TRBV10-3A0A0K0K1G6 114 aa1.92□□□□□ -2.1
PTPRC-213ENST00000529828 ZNF22P17026 224 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-213ENST00000529828 COX17Q14061 63 aa1.92□□□□□ -2.1
PTPRC-213ENST00000529828 URB1-AS1Q96HZ7 61 aa1.92□□□□□ -2.1
PTPRC-213ENST00000529828 COX6B2Q6YFQ2 88 aa1.91□□□□□ -2.1
PTPRC-213ENST00000529828 SMCR5Q8TEV8 140 aa1.91□□□□□ -2.1
PTPRC-213ENST00000529828 PRO1854Q9UHT4 67 aa1.91□□□□□ -2.1
PTPRC-213ENST00000529828 ERC2-IT1O76042 136 aa1.91□□□□□ -2.1
PTPRC-213ENST00000529828 COX6CP09669 75 aa1.91□□□□□ -2.1
PTPRC-213ENST00000529828 ADAMTSL4-AS1Q5T5F5 129 aa1.91□□□□□ -2.1
PTPRC-213ENST00000529828 A0A096LNJ9 63 aa1.9□□□□□ -2.1
PTPRC-213ENST00000529828 TMEM223A0PJW6 202 aa1.9□□□□□ -2.1
PTPRC-213ENST00000529828 F8WEM9 126 aa1.9□□□□□ -2.1
PTPRC-213ENST00000529828 NCR3O14931 201 aa1.9□□□□□ -2.1
PTPRC-213ENST00000529828 IGLV5-39A0A0G2JS06 123 aa1.9□□□□□ -2.11
PTPRC-213ENST00000529828 ETDCA0A1B0GVM5 59 aa1.9□□□□□ -2.11
PTPRC-213ENST00000529828 LINC00483Q53H64 154 aa1.9□□□□□ -2.11
PTPRC-213ENST00000529828 CFC1P0CG37 223 aa1.89□□□□□ -2.11
PTPRC-213ENST00000529828 LIMD2Q9BT23 127 aa1.89□□□□□ -2.11
PTPRC-213ENST00000529828 HCG22E2RYF7 251 aa1.89□□□□□ -2.11
PTPRC-213ENST00000529828 KRTAP4-16G5E9R7 235 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-213ENST00000529828 LINC00158P58513 81 aa1.89□□□□□ -2.11
PTPRC-213ENST00000529828 RPS29P62273 56 aaKnown RBP1.89□□□□□ -2.11
PTPRC-213ENST00000529828 TRAV22A0A0B4J277 110 aa1.88□□□□□ -2.11
PTPRC-213ENST00000529828 ZNF815PA8K554 130 aa1.88□□□□□ -2.11
PTPRC-213ENST00000529828 KRTAP16-1A8MUX0 517 aa1.88□□□□□ -2.11
PTPRC-213ENST00000529828 SSBP3-AS1Q7Z2R9 100 aa1.88□□□□□ -2.11
PTPRC-213ENST00000529828 SPTSSBQ8NFR3 76 aa1.88□□□□□ -2.11
PTPRC-213ENST00000529828 CDC42SE1Q9NRR8 79 aa1.88□□□□□ -2.11
PTPRC-213ENST00000529828 hDV103S1A0JD37 113 aa1.88□□□□□ -2.11
PTPRC-213ENST00000529828 H0YGX0 51 aa1.88□□□□□ -2.11
PTPRC-213ENST00000529828 SPRR1AP35321 89 aa1.88□□□□□ -2.11
PTPRC-213ENST00000529828 Q9BRP9 147 aa1.88□□□□□ -2.11
PTPRC-213ENST00000529828 IGLV6-57P01721 117 aa1.87□□□□□ -2.11
PTPRC-213ENST00000529828 TSPEAR-AS2P59090 65 aa1.87□□□□□ -2.11
PTPRC-213ENST00000529828 ST20-AS1Q8NBB2 130 aa1.87□□□□□ -2.11
PTPRC-213ENST00000529828 TTTY13Q9BZ97 58 aa1.87□□□□□ -2.11
PTPRC-213ENST00000529828 KCNQ1DNQ9H478 68 aa1.87□□□□□ -2.11
PTPRC-213ENST00000529828 H7C2G1 150 aa1.86□□□□□ -2.11
PTPRC-213ENST00000529828 DNAL4O96015 105 aa1.86□□□□□ -2.11
PTPRC-213ENST00000529828 Q5VV11 94 aa1.86□□□□□ -2.11
PTPRC-213ENST00000529828 MIR7-3HGQ8N6C7 128 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms