RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 LOC110117498A0A087WWA1 95 aa6.52□□□□□ -1.37
USH1C-208ENST00000529563 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
USH1C-208ENST00000529563 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
USH1C-208ENST00000529563 A0A1B0GW54 56 aa6.5□□□□□ -1.37
USH1C-208ENST00000529563 IGKV4-1P06312 121 aa6.5□□□□□ -1.37
USH1C-208ENST00000529563 Q6ZQT0 140 aa6.5□□□□□ -1.37
USH1C-208ENST00000529563 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
USH1C-208ENST00000529563 NREPQ16612 68 aa6.47□□□□□ -1.37
USH1C-208ENST00000529563 F8W1H4 67 aa6.46□□□□□ -1.38
USH1C-208ENST00000529563 J3KT08 172 aa6.46□□□□□ -1.38
USH1C-208ENST00000529563 NDUFB1O75438 58 aa6.46□□□□□ -1.38
USH1C-208ENST00000529563 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.38
USH1C-208ENST00000529563 DEFB116Q30KQ4 102 aa6.46□□□□□ -1.38
USH1C-208ENST00000529563 OBSCN-AS1Q96MR7 158 aa6.46□□□□□ -1.38
USH1C-208ENST00000529563 Q96NJ1 140 aa6.44□□□□□ -1.38
USH1C-208ENST00000529563 ATP11AUNQ6ZP68 121 aa6.43□□□□□ -1.38
USH1C-208ENST00000529563 IGHV6-1A0A0B4J1U7 121 aa6.42□□□□□ -1.38
USH1C-208ENST00000529563 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
USH1C-208ENST00000529563 LINC00472Q9H8W2 130 aa6.42□□□□□ -1.38
USH1C-208ENST00000529563 SMCPP49901 116 aaPredicted RBP6.41□□□□□ -1.38
USH1C-208ENST00000529563 LINC00313P59037 77 aa6.41□□□□□ -1.38
USH1C-208ENST00000529563 PRO0461Q9UI25 63 aa6.4□□□□□ -1.38
USH1C-208ENST00000529563 DSCR10P59022 87 aa6.39□□□□□ -1.39
USH1C-208ENST00000529563 ETDBQ3ZM63 59 aa6.38□□□□□ -1.39
USH1C-208ENST00000529563 UBL5Q9BZL1 73 aa6.38□□□□□ -1.39
USH1C-208ENST00000529563 C8orf87E5RJ46 101 aa6.37□□□□□ -1.39
USH1C-208ENST00000529563 A0A1B0GVX0 72 aa6.36□□□□□ -1.39
USH1C-208ENST00000529563 BPY2O14599 106 aa6.36□□□□□ -1.39
USH1C-208ENST00000529563 A8MWP4 228 aa6.34□□□□□ -1.39
USH1C-208ENST00000529563 Q75L30 129 aa6.34□□□□□ -1.39
USH1C-208ENST00000529563 A0A1B0GV90 55 aa6.33□□□□□ -1.4
USH1C-208ENST00000529563 Q6ZVQ6 151 aa6.32□□□□□ -1.4
USH1C-208ENST00000529563 FLGP20930 4061 aaPredicted RBP6.31□□□□□ -1.4
USH1C-208ENST00000529563 LINC00846Q9NV44 126 aa6.29□□□□□ -1.4
USH1C-208ENST00000529563 IGKV3D-7A0A0C4DH55 119 aa6.28□□□□□ -1.4
USH1C-208ENST00000529563 PRR15Q8IV56 129 aa6.28□□□□□ -1.4
USH1C-208ENST00000529563 C20orf166-AS1Q96NR2 134 aa6.28□□□□□ -1.4
USH1C-208ENST00000529563 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
USH1C-208ENST00000529563 A8MUU9 505 aa6.27□□□□□ -1.41
USH1C-208ENST00000529563 ACYP1P07311 99 aa6.27□□□□□ -1.41
USH1C-208ENST00000529563 NOTCH2NLQ7Z3S9 236 aa6.26□□□□□ -1.41
USH1C-208ENST00000529563 K7EQZ3 153 aa6.25□□□□□ -1.41
USH1C-208ENST00000529563 NDUFS5O43920 106 aa6.25□□□□□ -1.41
USH1C-208ENST00000529563 FAM236DA0A1B0GTK5 79 aa6.24□□□□□ -1.41
USH1C-208ENST00000529563 FAM236CP0DP71 79 aa6.24□□□□□ -1.41
USH1C-208ENST00000529563 hDV103S1A0JD37 113 aa6.23□□□□□ -1.41
USH1C-208ENST00000529563 J3QR89 54 aa6.23□□□□□ -1.41
USH1C-208ENST00000529563 KRTAP16-1A8MUX0 517 aa6.22□□□□□ -1.41
USH1C-208ENST00000529563 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
USH1C-208ENST00000529563 Q8N9L7 120 aa6.21□□□□□ -1.42
USH1C-208ENST00000529563 TMEM254Q8TBM7 123 aa6.21□□□□□ -1.42
USH1C-208ENST00000529563 MRPL34Q9BQ48 92 aaKnown RBP6.21□□□□□ -1.42
USH1C-208ENST00000529563 CASC2Q6XLA1 102 aa6.2□□□□□ -1.42
USH1C-208ENST00000529563 WFDC13Q8IUB5 93 aa6.2□□□□□ -1.42
USH1C-208ENST00000529563 MMP24-AS1A0A0U1RRL7 71 aa6.19□□□□□ -1.42
USH1C-208ENST00000529563 FAM240AA0A1B0GVK7 77 aa6.19□□□□□ -1.42
USH1C-208ENST00000529563 CXCL6P80162 114 aa6.19□□□□□ -1.42
USH1C-208ENST00000529563 ZCCHC13Q8WW36 166 aaKnown RBP6.17□□□□□ -1.42
USH1C-208ENST00000529563 HCG22E2RYF7 251 aa6.16□□□□□ -1.42
USH1C-208ENST00000529563 ATP5EP2Q5VTU8 51 aa6.16□□□□□ -1.42
USH1C-208ENST00000529563 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
USH1C-208ENST00000529563 RBM12B-AS1Q9P1G2 102 aa6.16□□□□□ -1.42
USH1C-208ENST00000529563 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
USH1C-208ENST00000529563 HIST1H4AP62805 103 aaKnown RBP6.14□□□□□ -1.43
USH1C-208ENST00000529563 LINC00643Q86TS7 51 aa6.11□□□□□ -1.43
USH1C-208ENST00000529563 USH2AO75445 5202 aa6.09□□□□□ -1.43
USH1C-208ENST00000529563 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
USH1C-208ENST00000529563 MT2AP02795 61 aa6.08□□□□□ -1.44
USH1C-208ENST00000529563 SPINK7P58062 85 aa6.07□□□□□ -1.44
USH1C-208ENST00000529563 SSPOA2VEC9 5147 aa6.07□□□□□ -1.44
USH1C-208ENST00000529563 K7ERU9 68 aa6.06□□□□□ -1.44
USH1C-208ENST00000529563 TP53AIP1Q9HCN2 124 aa6.06□□□□□ -1.44
USH1C-208ENST00000529563 IGKV2D-30A0A075B6S6 120 aa6.04□□□□□ -1.44
USH1C-208ENST00000529563 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
USH1C-208ENST00000529563 HRES1P13985 223 aa6.04□□□□□ -1.44
USH1C-208ENST00000529563 MT1FP04733 61 aa6.03□□□□□ -1.44
USH1C-208ENST00000529563 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
USH1C-208ENST00000529563 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
USH1C-208ENST00000529563 LCE2BO14633 110 aa5.99□□□□□ -1.45
USH1C-208ENST00000529563 MPLKIPQ8TAP9 179 aa5.99□□□□□ -1.45
USH1C-208ENST00000529563 FCGBPQ9Y6R7 5405 aaPredicted RBP5.98□□□□□ -1.45
USH1C-208ENST00000529563 Q5W150 140 aa5.98□□□□□ -1.45
USH1C-208ENST00000529563 A0A087WVE0 104 aa5.97□□□□□ -1.45
USH1C-208ENST00000529563 SCGB1A1P11684 91 aa5.97□□□□□ -1.45
USH1C-208ENST00000529563 KRTAP9-3Q9BYQ3 159 aa5.97□□□□□ -1.45
USH1C-208ENST00000529563 UQCRQO14949 82 aa5.94□□□□□ -1.46
USH1C-208ENST00000529563 TRAV22A0A0B4J277 110 aa5.93□□□□□ -1.46
USH1C-208ENST00000529563 ATOX1O00244 68 aa5.91□□□□□ -1.46
USH1C-208ENST00000529563 H0Y9P7 68 aa5.9□□□□□ -1.46
USH1C-208ENST00000529563 MP68P56378 58 aa5.89□□□□□ -1.47
USH1C-208ENST00000529563 IMUPQ9GZP8 106 aa5.89□□□□□ -1.47
USH1C-208ENST00000529563 LOC101927531A0A1B0GV80 90 aa5.88□□□□□ -1.47
USH1C-208ENST00000529563 C4orf26Q17RF5 130 aa5.87□□□□□ -1.47
USH1C-208ENST00000529563 MT-ATP8P03928 68 aa5.85□□□□□ -1.47
USH1C-208ENST00000529563 H1FX-AS1Q4G0G2 97 aa5.84□□□□□ -1.47
USH1C-208ENST00000529563 C1orf64Q8NEQ6 169 aa5.84□□□□□ -1.47
USH1C-208ENST00000529563 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
USH1C-208ENST00000529563 C5orf47Q569G3 176 aa5.83□□□□□ -1.48
USH1C-208ENST00000529563 LINC00208Q96KT6 92 aa5.83□□□□□ -1.48
USH1C-208ENST00000529563 CYP4F30PQ9H0H9 118 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms