RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TP53AIP1Q9HCN2 124 aa10.97□□□□□ -0.65
LTBP3-210ENST00000528516 LINC00472Q9H8W2 130 aa10.97□□□□□ -0.65
LTBP3-210ENST00000528516 PANO1I0J062 215 aa10.96□□□□□ -0.65
LTBP3-210ENST00000528516 PLA2G1BP04054 148 aaKnown RBP10.96□□□□□ -0.66
LTBP3-210ENST00000528516 HRES1P13985 223 aa10.95□□□□□ -0.66
LTBP3-210ENST00000528516 C8orf87E5RJ46 101 aa10.95□□□□□ -0.66
LTBP3-210ENST00000528516 TYMSOSQ8TAI1 123 aa10.93□□□□□ -0.66
LTBP3-210ENST00000528516 Q96NJ1 140 aa10.93□□□□□ -0.66
LTBP3-210ENST00000528516 A0A1B0GVX0 72 aa10.92□□□□□ -0.66
LTBP3-210ENST00000528516 A0A1B0GU69 56 aa10.91□□□□□ -0.66
LTBP3-210ENST00000528516 ACYP2P14621 99 aa10.87□□□□□ -0.67
LTBP3-210ENST00000528516 ADM2Q7Z4H4 148 aa10.87□□□□□ -0.67
LTBP3-210ENST00000528516 KRTAP11-1Q8IUC1 163 aa10.87□□□□□ -0.67
LTBP3-210ENST00000528516 C9orf92A6NGG3 77 aa10.85□□□□□ -0.67
LTBP3-210ENST00000528516 IGLV7-43P04211 117 aa10.83□□□□□ -0.68
LTBP3-210ENST00000528516 H3BS24 57 aa10.81□□□□□ -0.68
LTBP3-210ENST00000528516 LINC01554Q52M75 96 aa10.79□□□□□ -0.68
LTBP3-210ENST00000528516 Q8N1X5 172 aa10.77□□□□□ -0.69
LTBP3-210ENST00000528516 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
LTBP3-210ENST00000528516 Q6ZR54 194 aa10.73□□□□□ -0.69
LTBP3-210ENST00000528516 WWC2-AS2Q96NR7 200 aa10.72□□□□□ -0.69
LTBP3-210ENST00000528516 PLAC8Q9NZF1 115 aa10.72□□□□□ -0.69
LTBP3-210ENST00000528516 SPRR1BP22528 89 aa10.71□□□□□ -0.69
LTBP3-210ENST00000528516 K7ERS5 55 aa10.7□□□□□ -0.7
LTBP3-210ENST00000528516 FBN3Q75N90 2809 aa10.68□□□□□ -0.7
LTBP3-210ENST00000528516 SSBP3-AS1Q7Z2R9 100 aa10.68□□□□□ -0.7
LTBP3-210ENST00000528516 COL7A1Q02388 2944 aa10.68□□□□□ -0.7
LTBP3-210ENST00000528516 A0A087X002 238 aa10.68□□□□□ -0.7
LTBP3-210ENST00000528516 MIR22HGQ0VDD5 57 aa10.68□□□□□ -0.7
LTBP3-210ENST00000528516 NOTCH2NLQ7Z3S9 236 aa10.68□□□□□ -0.7
LTBP3-210ENST00000528516 ANK2Q01484 3957 aa10.67□□□□□ -0.7
LTBP3-210ENST00000528516 UQCR11O14957 56 aa10.63□□□□□ -0.71
LTBP3-210ENST00000528516 CSMD3Q7Z407 3707 aa10.62□□□□□ -0.71
LTBP3-210ENST00000528516 CSAG1Q6PB30 78 aa10.61□□□□□ -0.71
LTBP3-210ENST00000528516 KRTAP10-2P60368 255 aa10.6□□□□□ -0.71
LTBP3-210ENST00000528516 Q5W150 140 aa10.6□□□□□ -0.71
LTBP3-210ENST00000528516 LINC00304Q8N9R0 145 aa10.59□□□□□ -0.71
LTBP3-210ENST00000528516 ASB16-AS1Q495Z4 193 aa10.52□□□□□ -0.73
LTBP3-210ENST00000528516 SPATA8Q6RVD6 105 aa10.48□□□□□ -0.73
LTBP3-210ENST00000528516 KRTAP10-1P60331 282 aa10.46□□□□□ -0.73
LTBP3-210ENST00000528516 CMYA5Q8N3K9 4069 aa10.46□□□□□ -0.74
LTBP3-210ENST00000528516 DMAC1Q96GE9 116 aa10.45□□□□□ -0.74
LTBP3-210ENST00000528516 HUWE1Q7Z6Z7 4374 aaKnown RBP10.44□□□□□ -0.74
LTBP3-210ENST00000528516 A0A0D9SG42 100 aa10.4□□□□□ -0.74
LTBP3-210ENST00000528516 Q6ZRN7 208 aaPredicted RBP10.37□□□□□ -0.75
LTBP3-210ENST00000528516 KRTAP13-1Q8IUC0 172 aa10.37□□□□□ -0.75
LTBP3-210ENST00000528516 MEGF8Q7Z7M0 2845 aa10.35□□□□□ -0.75
LTBP3-210ENST00000528516 LINC00483Q53H64 154 aa10.31□□□□□ -0.76
LTBP3-210ENST00000528516 CRIPTQ9P021 101 aa10.31□□□□□ -0.76
LTBP3-210ENST00000528516 DNHD1Q96M86 4753 aa10.29□□□□□ -0.76
LTBP3-210ENST00000528516 DNAH9Q9NYC9 4486 aa10.26□□□□□ -0.77
LTBP3-210ENST00000528516 DNAH3Q8TD57 4116 aa10.24□□□□□ -0.77
LTBP3-210ENST00000528516 KRTAP13-3Q3SY46 172 aa10.24□□□□□ -0.77
LTBP3-210ENST00000528516 LYSTQ99698 3801 aa10.22□□□□□ -0.77
LTBP3-210ENST00000528516 PRKDCP78527 4128 aaKnown RBP10.16□□□□□ -0.78
LTBP3-210ENST00000528516 KRTAP13-2Q52LG2 175 aa10.14□□□□□ -0.79
LTBP3-210ENST00000528516 DNAH10Q8IVF4 4471 aa10.13□□□□□ -0.79
LTBP3-210ENST00000528516 SPINT4Q6UDR6 99 aa10.13□□□□□ -0.79
LTBP3-210ENST00000528516 PLECQ15149 4684 aaKnown RBP10.11□□□□□ -0.79
LTBP3-210ENST00000528516 A0A1B0GU33 70 aa10.1□□□□□ -0.79
LTBP3-210ENST00000528516 KRTAP25-1Q3LHN0 102 aa10.07□□□□□ -0.8
LTBP3-210ENST00000528516 ROMO1P60602 79 aa10.05□□□□□ -0.8
LTBP3-210ENST00000528516 STARD9Q9P2P6 4700 aa10.02□□□□□ -0.8
LTBP3-210ENST00000528516 DNAH7Q8WXX0 4024 aa10.01□□□□□ -0.81
LTBP3-210ENST00000528516 J3QL48 77 aa9.96□□□□□ -0.82
LTBP3-210ENST00000528516 Q6ZSA8 131 aa9.95□□□□□ -0.82
LTBP3-210ENST00000528516 A8MUU9 505 aa9.94□□□□□ -0.82
LTBP3-210ENST00000528516 H0YAA0 97 aa9.94□□□□□ -0.82
LTBP3-210ENST00000528516 COX6B2Q6YFQ2 88 aa9.92□□□□□ -0.82
LTBP3-210ENST00000528516 KRTAP21-3Q3LHN1 58 aa9.91□□□□□ -0.82
LTBP3-210ENST00000528516 KMT2AQ03164 3969 aa9.88□□□□□ -0.83
LTBP3-210ENST00000528516 Q5VSD8 79 aa9.85□□□□□ -0.83
LTBP3-210ENST00000528516 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
LTBP3-210ENST00000528516 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
LTBP3-210ENST00000528516 ALMS1Q8TCU4 4167 aa9.83□□□□□ -0.84
LTBP3-210ENST00000528516 DNAH1Q9P2D7 4330 aa9.82□□□□□ -0.84
LTBP3-210ENST00000528516 VPS13DQ5THJ4 4388 aa9.74□□□□□ -0.85
LTBP3-210ENST00000528516 KRTAP1-4P0C5Y4 121 aa9.73□□□□□ -0.85
LTBP3-210ENST00000528516 S4R3F8 94 aa9.7□□□□□ -0.86
LTBP3-210ENST00000528516 P0C880 135 aa9.67□□□□□ -0.86
LTBP3-210ENST00000528516 DYNC2H1Q8NCM8 4307 aaKnown RBP9.65□□□□□ -0.86
LTBP3-210ENST00000528516 FRAS1Q86XX4 4008 aa9.64□□□□□ -0.87
LTBP3-210ENST00000528516 DNAH2Q9P225 4427 aa9.62□□□□□ -0.87
LTBP3-210ENST00000528516 DNAH8Q96JB1 4490 aa9.61□□□□□ -0.87
LTBP3-210ENST00000528516 NDUFAF8A1L188 74 aa9.61□□□□□ -0.87
LTBP3-210ENST00000528516 DNAH11Q96DT5 4516 aa9.59□□□□□ -0.87
LTBP3-210ENST00000528516 RPL37P61927 97 aaKnown RBP9.59□□□□□ -0.87
LTBP3-210ENST00000528516 HYDINQ4G0P3 5121 aa9.55□□□□□ -0.88
LTBP3-210ENST00000528516 R4GN34 69 aa9.54□□□□□ -0.88
LTBP3-210ENST00000528516 C10orf95Q9H7T3 257 aa9.53□□□□□ -0.88
LTBP3-210ENST00000528516 CAMK2N1Q7Z7J9 78 aa9.53□□□□□ -0.88
LTBP3-210ENST00000528516 DNAH6Q9C0G6 4158 aa9.5□□□□□ -0.89
LTBP3-210ENST00000528516 HECTD4Q9Y4D8 3996 aa9.48□□□□□ -0.89
LTBP3-210ENST00000528516 DNAH17Q9UFH2 4485 aa9.47□□□□□ -0.89
LTBP3-210ENST00000528516 M0QZ58 72 aa9.47□□□□□ -0.89
LTBP3-210ENST00000528516 KRTAP3-1Q9BYR8 98 aa9.46□□□□□ -0.9
LTBP3-210ENST00000528516 C20orf166-AS1Q96NR2 134 aa9.41□□□□□ -0.9
LTBP3-210ENST00000528516 TPRXLQ17RH7 258 aa9.4□□□□□ -0.9
LTBP3-210ENST00000528516 M0R2T5 61 aa9.38□□□□□ -0.91
LTBP3-210ENST00000528516 LRP1BQ9NZR2 4599 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms