RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 J3KT08 172 aa9.55□□□□□ -0.88
CCS-204ENST00000526066 IGKV4-1P06312 121 aa9.54□□□□□ -0.88
CCS-204ENST00000526066 Q6ZVQ6 151 aa9.54□□□□□ -0.88
CCS-204ENST00000526066 UBL5Q9BZL1 73 aa9.54□□□□□ -0.88
CCS-204ENST00000526066 CRCT1Q9UGL9 99 aa9.54□□□□□ -0.88
CCS-204ENST00000526066 DEFB116Q30KQ4 102 aa9.52□□□□□ -0.89
CCS-204ENST00000526066 SIGMAR1Q99720 223 aa9.52□□□□□ -0.89
CCS-204ENST00000526066 J3QR89 54 aa9.51□□□□□ -0.89
CCS-204ENST00000526066 SEC61BP60468 96 aaKnown RBP9.51□□□□□ -0.89
CCS-204ENST00000526066 KRTAP13-3Q3SY46 172 aa9.5□□□□□ -0.89
CCS-204ENST00000526066 BPY2O14599 106 aa9.46□□□□□ -0.9
CCS-204ENST00000526066 A8MWP4 228 aa9.45□□□□□ -0.9
CCS-204ENST00000526066 NDUFB1O75438 58 aa9.44□□□□□ -0.9
CCS-204ENST00000526066 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
CCS-204ENST00000526066 DSCR10P59022 87 aa9.43□□□□□ -0.9
CCS-204ENST00000526066 FSIP2Q5CZC0 6907 aa9.43□□□□□ -0.9
CCS-204ENST00000526066 IGKV3D-7A0A0C4DH55 119 aa9.4□□□□□ -0.9
CCS-204ENST00000526066 C9orf92A6NGG3 77 aa9.4□□□□□ -0.9
CCS-204ENST00000526066 C8orf87E5RJ46 101 aa9.4□□□□□ -0.9
CCS-204ENST00000526066 K7ERU9 68 aa9.4□□□□□ -0.9
CCS-204ENST00000526066 PRR15Q8IV56 129 aa9.4□□□□□ -0.9
CCS-204ENST00000526066 IGHV6-1A0A0B4J1U7 121 aa9.39□□□□□ -0.91
CCS-204ENST00000526066 LINC00313P59037 77 aa9.38□□□□□ -0.91
CCS-204ENST00000526066 CXCL6P80162 114 aa9.38□□□□□ -0.91
CCS-204ENST00000526066 K7EQZ3 153 aa9.36□□□□□ -0.91
CCS-204ENST00000526066 XP32Q5T750 250 aa9.36□□□□□ -0.91
CCS-204ENST00000526066 ATP5EP2Q5VTU8 51 aa9.36□□□□□ -0.91
CCS-204ENST00000526066 LINC00643Q86TS7 51 aa9.36□□□□□ -0.91
CCS-204ENST00000526066 KRTAP4-1Q9BYQ7 146 aa9.35□□□□□ -0.91
CCS-204ENST00000526066 NOTCH2NLQ7Z3S9 236 aa9.34□□□□□ -0.91
CCS-204ENST00000526066 C8orf17Q9NRJ1 99 aa9.33□□□□□ -0.92
CCS-204ENST00000526066 Q8N9L7 120 aa9.31□□□□□ -0.92
CCS-204ENST00000526066 KRTAP16-1A8MUX0 517 aa9.3□□□□□ -0.92
CCS-204ENST00000526066 MMP24-AS1A0A0U1RRL7 71 aa9.28□□□□□ -0.92
CCS-204ENST00000526066 C20orf166-AS1Q96NR2 134 aa9.27□□□□□ -0.93
CCS-204ENST00000526066 A8MUU9 505 aa9.26□□□□□ -0.93
CCS-204ENST00000526066 Q75L30 129 aa9.26□□□□□ -0.93
CCS-204ENST00000526066 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
CCS-204ENST00000526066 TMEM254Q8TBM7 123 aa9.24□□□□□ -0.93
CCS-204ENST00000526066 hDV103S1A0JD37 113 aa9.23□□□□□ -0.93
CCS-204ENST00000526066 HCG22E2RYF7 251 aa9.21□□□□□ -0.94
CCS-204ENST00000526066 Q8N9P0 234 aaPredicted RBP9.21□□□□□ -0.94
CCS-204ENST00000526066 MRPL34Q9BQ48 92 aaKnown RBP9.21□□□□□ -0.94
CCS-204ENST00000526066 CASC2Q6XLA1 102 aa9.2□□□□□ -0.94
CCS-204ENST00000526066 HIST1H4AP62805 103 aaKnown RBP9.18□□□□□ -0.94
CCS-204ENST00000526066 LCE2CQ5TA81 110 aa9.18□□□□□ -0.94
CCS-204ENST00000526066 WFDC13Q8IUB5 93 aa9.18□□□□□ -0.94
CCS-204ENST00000526066 MT1HP80294 61 aa9.16□□□□□ -0.94
CCS-204ENST00000526066 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
CCS-204ENST00000526066 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
CCS-204ENST00000526066 M0R2T5 61 aa9.12□□□□□ -0.95
CCS-204ENST00000526066 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
CCS-204ENST00000526066 MT-ATP8P03928 68 aa9.1□□□□□ -0.95
CCS-204ENST00000526066 KRTAP19-2Q3LHN2 52 aa9.1□□□□□ -0.95
CCS-204ENST00000526066 A0A087WVE0 104 aa9.09□□□□□ -0.95
CCS-204ENST00000526066 NDUFS5O43920 106 aa9.08□□□□□ -0.96
CCS-204ENST00000526066 COX6B2Q6YFQ2 88 aa9.07□□□□□ -0.96
CCS-204ENST00000526066 ZCCHC13Q8WW36 166 aaKnown RBP9.07□□□□□ -0.96
CCS-204ENST00000526066 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
CCS-204ENST00000526066 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
CCS-204ENST00000526066 TP53AIP1Q9HCN2 124 aa9.03□□□□□ -0.96
CCS-204ENST00000526066 KRTAP9-7A8MTY7 169 aa8.97□□□□□ -0.97
CCS-204ENST00000526066 Q5W150 140 aa8.96□□□□□ -0.98
CCS-204ENST00000526066 UQCRQO14949 82 aa8.93□□□□□ -0.98
CCS-204ENST00000526066 SCGB1A1P11684 91 aa8.91□□□□□ -0.98
CCS-204ENST00000526066 OCR1Q9BZK8 76 aa8.91□□□□□ -0.98
CCS-204ENST00000526066 FAM236AA0A1B0GUQ0 79 aa8.9□□□□□ -0.98
CCS-204ENST00000526066 FAM236BA0A1B0GV22 79 aa8.9□□□□□ -0.98
CCS-204ENST00000526066 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.88□□□□□ -0.99
CCS-204ENST00000526066 SPINK7P58062 85 aa8.88□□□□□ -0.99
CCS-204ENST00000526066 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
CCS-204ENST00000526066 C7orf65Q6ZTY9 151 aa8.83□□□□□ -1
CCS-204ENST00000526066 SMIM20Q8N5G0 67 aa8.83□□□□□ -1
CCS-204ENST00000526066 SVIPQ8NHG7 77 aa8.83□□□□□ -1
CCS-204ENST00000526066 ATOX1O00244 68 aa8.82□□□□□ -1
CCS-204ENST00000526066 IGKV2-30P06310 120 aa8.82□□□□□ -1
CCS-204ENST00000526066 IGKV2D-30A0A075B6S6 120 aa8.81□□□□□ -1
CCS-204ENST00000526066 H0Y9P7 68 aa8.81□□□□□ -1
CCS-204ENST00000526066 HRES1P13985 223 aa8.8□□□□□ -1
CCS-204ENST00000526066 C5orf47Q569G3 176 aa8.8□□□□□ -1
CCS-204ENST00000526066 TRAV7A0A075B6U4 112 aa8.78□□□□□ -1
CCS-204ENST00000526066 LOC101927531A0A1B0GV80 90 aa8.78□□□□□ -1
CCS-204ENST00000526066 MP68P56378 58 aa8.77□□□□□ -1.01
CCS-204ENST00000526066 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
CCS-204ENST00000526066 MPLKIPQ8TAP9 179 aa8.76□□□□□ -1.01
CCS-204ENST00000526066 H3BPC8 53 aa8.74□□□□□ -1.01
CCS-204ENST00000526066 CYP4F30PQ9H0H9 118 aa8.73□□□□□ -1.01
CCS-204ENST00000526066 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
CCS-204ENST00000526066 C1orf64Q8NEQ6 169 aa8.71□□□□□ -1.02
CCS-204ENST00000526066 LINC00208Q96KT6 92 aa8.71□□□□□ -1.02
CCS-204ENST00000526066 SERP2Q8N6R1 65 aa8.69□□□□□ -1.02
CCS-204ENST00000526066 FAM236DA0A1B0GTK5 79 aa8.63□□□□□ -1.03
CCS-204ENST00000526066 FAM236CP0DP71 79 aa8.63□□□□□ -1.03
CCS-204ENST00000526066 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
CCS-204ENST00000526066 SSPOA2VEC9 5147 aa8.59□□□□□ -1.03
CCS-204ENST00000526066 COX7CP15954 63 aa8.57□□□□□ -1.04
CCS-204ENST00000526066 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
CCS-204ENST00000526066 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
CCS-204ENST00000526066 USH2AO75445 5202 aa8.56□□□□□ -1.04
CCS-204ENST00000526066 C20orf197Q8N268 126 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms