RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 IGKV4-1P06312 121 aa9.63□□□□□ -0.87
TSPAN4-216ENST00000526055 LCE2DQ5TA82 110 aaPredicted RBP9.63□□□□□ -0.87
TSPAN4-216ENST00000526055 LINC00472Q9H8W2 130 aa9.62□□□□□ -0.87
TSPAN4-216ENST00000526055 A0A1B0GW54 56 aa9.61□□□□□ -0.87
TSPAN4-216ENST00000526055 LINC00313P59037 77 aa9.61□□□□□ -0.87
TSPAN4-216ENST00000526055 GTF2H5Q6ZYL4 71 aa9.61□□□□□ -0.87
TSPAN4-216ENST00000526055 MTURNQ8N3F0 131 aa9.61□□□□□ -0.87
TSPAN4-216ENST00000526055 DSCR10P59022 87 aa9.6□□□□□ -0.87
TSPAN4-216ENST00000526055 Q6ZQT0 140 aa9.6□□□□□ -0.87
TSPAN4-216ENST00000526055 C14orf132Q9NPU4 83 aa9.6□□□□□ -0.87
TSPAN4-216ENST00000526055 KRTAP16-1A8MUX0 517 aa9.54□□□□□ -0.88
TSPAN4-216ENST00000526055 M0R2T5 61 aa9.53□□□□□ -0.88
TSPAN4-216ENST00000526055 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.89
TSPAN4-216ENST00000526055 DEFB116Q30KQ4 102 aa9.52□□□□□ -0.89
TSPAN4-216ENST00000526055 PRO0461Q9UI25 63 aa9.52□□□□□ -0.89
TSPAN4-216ENST00000526055 J3KT08 172 aa9.51□□□□□ -0.89
TSPAN4-216ENST00000526055 LORP23490 312 aaPredicted RBP9.51□□□□□ -0.89
TSPAN4-216ENST00000526055 KRTAP10-6P60371 365 aaPredicted RBP9.51□□□□□ -0.89
TSPAN4-216ENST00000526055 C8orf87E5RJ46 101 aa9.5□□□□□ -0.89
TSPAN4-216ENST00000526055 FLGP20930 4061 aaPredicted RBP9.5□□□□□ -0.89
TSPAN4-216ENST00000526055 IGHV6-1A0A0B4J1U7 121 aa9.49□□□□□ -0.89
TSPAN4-216ENST00000526055 F8W1H4 67 aa9.49□□□□□ -0.89
TSPAN4-216ENST00000526055 A0A1B0GVX0 72 aa9.48□□□□□ -0.89
TSPAN4-216ENST00000526055 NOTCH2NLQ7Z3S9 236 aa9.48□□□□□ -0.89
TSPAN4-216ENST00000526055 FSIP2Q5CZC0 6907 aa9.47□□□□□ -0.89
TSPAN4-216ENST00000526055 CRCT1Q9UGL9 99 aa9.47□□□□□ -0.89
TSPAN4-216ENST00000526055 NREPQ16612 68 aa9.42□□□□□ -0.9
TSPAN4-216ENST00000526055 NDUFB1O75438 58 aa9.41□□□□□ -0.9
TSPAN4-216ENST00000526055 ETDBQ3ZM63 59 aa9.36□□□□□ -0.91
TSPAN4-216ENST00000526055 A8MWP4 228 aa9.35□□□□□ -0.91
TSPAN4-216ENST00000526055 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
TSPAN4-216ENST00000526055 Q8N9P0 234 aaPredicted RBP9.32□□□□□ -0.92
TSPAN4-216ENST00000526055 MPLKIPQ8TAP9 179 aa9.32□□□□□ -0.92
TSPAN4-216ENST00000526055 HRES1P13985 223 aa9.31□□□□□ -0.92
TSPAN4-216ENST00000526055 ZCCHC13Q8WW36 166 aaKnown RBP9.31□□□□□ -0.92
TSPAN4-216ENST00000526055 Q6ZVQ6 151 aa9.3□□□□□ -0.92
TSPAN4-216ENST00000526055 UBL5Q9BZL1 73 aa9.3□□□□□ -0.92
TSPAN4-216ENST00000526055 C8orf17Q9NRJ1 99 aa9.3□□□□□ -0.92
TSPAN4-216ENST00000526055 FAM236DA0A1B0GTK5 79 aa9.29□□□□□ -0.92
TSPAN4-216ENST00000526055 A0A1B0GV90 55 aa9.29□□□□□ -0.92
TSPAN4-216ENST00000526055 FAM236CP0DP71 79 aa9.29□□□□□ -0.92
TSPAN4-216ENST00000526055 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
TSPAN4-216ENST00000526055 BPY2O14599 106 aa9.28□□□□□ -0.92
TSPAN4-216ENST00000526055 PRR15Q8IV56 129 aa9.26□□□□□ -0.93
TSPAN4-216ENST00000526055 LINC00846Q9NV44 126 aa9.26□□□□□ -0.93
TSPAN4-216ENST00000526055 SPINK7P58062 85 aa9.21□□□□□ -0.94
TSPAN4-216ENST00000526055 K7EQZ3 153 aa9.2□□□□□ -0.94
TSPAN4-216ENST00000526055 ACYP1P07311 99 aa9.2□□□□□ -0.94
TSPAN4-216ENST00000526055 KRTAP9-8Q9BYQ0 159 aa9.19□□□□□ -0.94
TSPAN4-216ENST00000526055 TMEM254Q8TBM7 123 aa9.18□□□□□ -0.94
TSPAN4-216ENST00000526055 MMP24-AS1A0A0U1RRL7 71 aa9.16□□□□□ -0.94
TSPAN4-216ENST00000526055 FAM240AA0A1B0GVK7 77 aa9.16□□□□□ -0.94
TSPAN4-216ENST00000526055 MRPL34Q9BQ48 92 aaKnown RBP9.16□□□□□ -0.94
TSPAN4-216ENST00000526055 hDV103S1A0JD37 113 aa9.13□□□□□ -0.95
TSPAN4-216ENST00000526055 CXCL6P80162 114 aa9.11□□□□□ -0.95
TSPAN4-216ENST00000526055 Q8N9L7 120 aa9.11□□□□□ -0.95
TSPAN4-216ENST00000526055 CASC2Q6XLA1 102 aa9.07□□□□□ -0.96
TSPAN4-216ENST00000526055 WFDC13Q8IUB5 93 aa9.06□□□□□ -0.96
TSPAN4-216ENST00000526055 MT2AP02795 61 aa9.05□□□□□ -0.96
TSPAN4-216ENST00000526055 J3QR89 54 aa9.04□□□□□ -0.96
TSPAN4-216ENST00000526055 NDUFS5O43920 106 aa9.04□□□□□ -0.96
TSPAN4-216ENST00000526055 ATP5EP2Q5VTU8 51 aa9.04□□□□□ -0.96
TSPAN4-216ENST00000526055 HCG22E2RYF7 251 aa9.03□□□□□ -0.96
TSPAN4-216ENST00000526055 MT1FP04733 61 aa8.97□□□□□ -0.97
TSPAN4-216ENST00000526055 LINC00643Q86TS7 51 aa8.97□□□□□ -0.97
TSPAN4-216ENST00000526055 KRTAP10-10P60014 251 aa8.95□□□□□ -0.98
TSPAN4-216ENST00000526055 C7orf65Q6ZTY9 151 aa8.94□□□□□ -0.98
TSPAN4-216ENST00000526055 Q5W150 140 aa8.92□□□□□ -0.98
TSPAN4-216ENST00000526055 IGKV2D-30A0A075B6S6 120 aa8.9□□□□□ -0.98
TSPAN4-216ENST00000526055 IGKV2-30P06310 120 aa8.9□□□□□ -0.98
TSPAN4-216ENST00000526055 HIST1H4AP62805 103 aaKnown RBP8.9□□□□□ -0.98
TSPAN4-216ENST00000526055 H1FX-AS1Q4G0G2 97 aa8.9□□□□□ -0.98
TSPAN4-216ENST00000526055 KRTAP9-3Q9BYQ3 159 aa8.9□□□□□ -0.98
TSPAN4-216ENST00000526055 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
TSPAN4-216ENST00000526055 USH2AO75445 5202 aa8.85□□□□□ -0.99
TSPAN4-216ENST00000526055 K7ERU9 68 aa8.84□□□□□ -0.99
TSPAN4-216ENST00000526055 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.82□□□□□ -1
TSPAN4-216ENST00000526055 LCE2BO14633 110 aa8.82□□□□□ -1
TSPAN4-216ENST00000526055 SSPOA2VEC9 5147 aa8.78□□□□□ -1
TSPAN4-216ENST00000526055 KRTAP9-7A8MTY7 169 aa8.78□□□□□ -1
TSPAN4-216ENST00000526055 A0A087WVE0 104 aa8.76□□□□□ -1.01
TSPAN4-216ENST00000526055 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
TSPAN4-216ENST00000526055 TRAV22A0A0B4J277 110 aa8.7□□□□□ -1.02
TSPAN4-216ENST00000526055 UQCRQO14949 82 aa8.7□□□□□ -1.02
TSPAN4-216ENST00000526055 FCGBPQ9Y6R7 5405 aaPredicted RBP8.67□□□□□ -1.02
TSPAN4-216ENST00000526055 KRTAP19-1Q8IUB9 90 aa8.67□□□□□ -1.02
TSPAN4-216ENST00000526055 IMUPQ9GZP8 106 aa8.67□□□□□ -1.02
TSPAN4-216ENST00000526055 ATOX1O00244 68 aa8.65□□□□□ -1.02
TSPAN4-216ENST00000526055 LOC101927531A0A1B0GV80 90 aa8.63□□□□□ -1.03
TSPAN4-216ENST00000526055 H0Y9P7 68 aa8.61□□□□□ -1.03
TSPAN4-216ENST00000526055 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
TSPAN4-216ENST00000526055 KRTAP3-1Q9BYR8 98 aa8.61□□□□□ -1.03
TSPAN4-216ENST00000526055 SCGB1A1P11684 91 aa8.6□□□□□ -1.03
TSPAN4-216ENST00000526055 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
TSPAN4-216ENST00000526055 OCR1Q9BZK8 76 aa8.59□□□□□ -1.03
TSPAN4-216ENST00000526055 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
TSPAN4-216ENST00000526055 S4R3F8 94 aa8.58□□□□□ -1.04
TSPAN4-216ENST00000526055 KRTAP19-6Q3LI70 58 aa8.57□□□□□ -1.04
TSPAN4-216ENST00000526055 MP68P56378 58 aa8.56□□□□□ -1.04
TSPAN4-216ENST00000526055 C5orf47Q569G3 176 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms