RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 C12orf73Q69YU5 71 aa0.35□□□□□ -2.35
PCM1-220ENST00000523896 STX12Q86Y82 276 aa0.35□□□□□ -2.35
PCM1-220ENST00000523896 C5orf17Q8NAS9 161 aa0.35□□□□□ -2.35
PCM1-220ENST00000523896 PYDC1Q8WXC3 89 aa0.35□□□□□ -2.35
PCM1-220ENST00000523896 PRELID3AQ96N28 172 aa0.35□□□□□ -2.35
PCM1-220ENST00000523896 AP1S3Q96PC3 154 aa0.35□□□□□ -2.35
PCM1-220ENST00000523896 FXYD6Q9H0Q3 95 aa0.35□□□□□ -2.35
PCM1-220ENST00000523896 COPZ2Q9P299 210 aa0.35□□□□□ -2.35
PCM1-220ENST00000523896 TRBV27A0A0K0K1C4 114 aa0.34□□□□□ -2.36
PCM1-220ENST00000523896 F8VRH5 84 aa0.34□□□□□ -2.36
PCM1-220ENST00000523896 ALKAL2Q6UX46 152 aa0.34□□□□□ -2.36
PCM1-220ENST00000523896 CLEC2BQ92478 149 aa0.34□□□□□ -2.36
PCM1-220ENST00000523896 CIB3Q96Q77 187 aaPredicted RBP0.34□□□□□ -2.36
PCM1-220ENST00000523896 PDCD5O14737 125 aa0.33□□□□□ -2.36
PCM1-220ENST00000523896 MT1AP04731 61 aa0.33□□□□□ -2.36
PCM1-220ENST00000523896 UBE2L3P68036 154 aaKnown RBP0.33□□□□□ -2.36
PCM1-220ENST00000523896 SMCO1Q147U7 214 aa0.33□□□□□ -2.36
PCM1-220ENST00000523896 Q6ZUT4 128 aa0.33□□□□□ -2.36
PCM1-220ENST00000523896 TMEM229BQ8NBD8 167 aa0.33□□□□□ -2.36
PCM1-220ENST00000523896 C7orf77A4D0Y5 90 aa0.32□□□□□ -2.36
PCM1-220ENST00000523896 D6R8Y8 96 aa0.32□□□□□ -2.36
PCM1-220ENST00000523896 I3L3M4 83 aa0.32□□□□□ -2.36
PCM1-220ENST00000523896 GNG11P61952 73 aa0.32□□□□□ -2.36
PCM1-220ENST00000523896 MIC13Q5XKP0 118 aa0.32□□□□□ -2.36
PCM1-220ENST00000523896 Q8IZM0 81 aa0.32□□□□□ -2.36
PCM1-220ENST00000523896 DEFB105AQ8NG35 78 aa0.32□□□□□ -2.36
PCM1-220ENST00000523896 DSCR8Q96T75 97 aa0.32□□□□□ -2.36
PCM1-220ENST00000523896 PSMG3Q9BT73 122 aaPredicted RBP0.32□□□□□ -2.36
PCM1-220ENST00000523896 FAM107BQ9H098 131 aa0.32□□□□□ -2.36
PCM1-220ENST00000523896 S4R3F8 94 aa0.32□□□□□ -2.36
PCM1-220ENST00000523896 SLC25A6P12236 298 aa0.31□□□□□ -2.36
PCM1-220ENST00000523896 FCER1GP30273 86 aa0.31□□□□□ -2.36
PCM1-220ENST00000523896 SPRR1AP35321 89 aa0.31□□□□□ -2.36
PCM1-220ENST00000523896 Q6ZRX8 168 aa0.31□□□□□ -2.36
PCM1-220ENST00000523896 SNX29P2Q8IUI4 249 aa0.31□□□□□ -2.36
PCM1-220ENST00000523896 MGST2Q99735 147 aa0.31□□□□□ -2.36
PCM1-220ENST00000523896 PSENENQ9NZ42 101 aa0.31□□□□□ -2.36
PCM1-220ENST00000523896 TRBV7-6A0A0J9YX20 115 aa0.3□□□□□ -2.36
PCM1-220ENST00000523896 H3BMG7 143 aa0.3□□□□□ -2.36
PCM1-220ENST00000523896 CD3DP04234 171 aa0.3□□□□□ -2.36
PCM1-220ENST00000523896 RPL39LQ96EH5 51 aaKnown RBP0.3□□□□□ -2.36
PCM1-220ENST00000523896 FAM167A-AS1Q96KT0 104 aa0.3□□□□□ -2.36
PCM1-220ENST00000523896 AMELXQ99217 191 aa0.3□□□□□ -2.36
PCM1-220ENST00000523896 KCNQ1DNQ9H478 68 aa0.3□□□□□ -2.36
PCM1-220ENST00000523896 LOC100130705A0A1B0GUX0 176 aa0.29□□□□□ -2.36
PCM1-220ENST00000523896 IFITM5A6NNB3 132 aa0.29□□□□□ -2.36
PCM1-220ENST00000523896 SIX6O95475 246 aa0.29□□□□□ -2.36
PCM1-220ENST00000523896 C3orf79P0CE67 100 aa0.29□□□□□ -2.36
PCM1-220ENST00000523896 CRIP1P50238 77 aa0.29□□□□□ -2.36
PCM1-220ENST00000523896 SMIM2Q9BVW6 85 aa0.29□□□□□ -2.36
PCM1-220ENST00000523896 TRBV7-7A0A0K0K1E9 115 aa0.28□□□□□ -2.36
PCM1-220ENST00000523896 TRBV10-3A0A0K0K1G6 114 aa0.28□□□□□ -2.36
PCM1-220ENST00000523896 UBE2L5PA0A1B0GUS4 154 aa0.28□□□□□ -2.36
PCM1-220ENST00000523896 K7EQZ3 153 aa0.28□□□□□ -2.36
PCM1-220ENST00000523896 SSSCA1O60232 199 aa0.28□□□□□ -2.36
PCM1-220ENST00000523896 TMEM191AQ9H0A3 160 aa0.28□□□□□ -2.36
PCM1-220ENST00000523896 ST20Q9HBF5 79 aa0.28□□□□□ -2.36
PCM1-220ENST00000523896 NXT2Q9NPJ8 142 aaKnown RBP0.28□□□□□ -2.36
PCM1-220ENST00000523896 SAR1AQ9NR31 198 aa0.28□□□□□ -2.36
PCM1-220ENST00000523896 LSM2Q9Y333 95 aaKnown RBP0.28□□□□□ -2.36
PCM1-220ENST00000523896 PIGBOS1A0A0B4J2F0 54 aa0.27□□□□□ -2.37
PCM1-220ENST00000523896 TEX49A0A1B0GTD5 131 aa0.27□□□□□ -2.37
PCM1-220ENST00000523896 M0QZ58 72 aa0.27□□□□□ -2.37
PCM1-220ENST00000523896 S100A5P33763 92 aa0.27□□□□□ -2.37
PCM1-220ENST00000523896 COX7B2Q8TF08 81 aa0.27□□□□□ -2.37
PCM1-220ENST00000523896 ANP32BQ92688 251 aaKnown RBP0.27□□□□□ -2.37
PCM1-220ENST00000523896 LINC00208Q96KT6 92 aa0.27□□□□□ -2.37
PCM1-220ENST00000523896 C2orf88Q9BSF0 95 aa0.27□□□□□ -2.37
PCM1-220ENST00000523896 GSKIPQ9P0R6 139 aa0.27□□□□□ -2.37
PCM1-220ENST00000523896 A0A087WXM4 84 aa0.26□□□□□ -2.37
PCM1-220ENST00000523896 EFCAB10A6NFE3 127 aa0.26□□□□□ -2.37
PCM1-220ENST00000523896 UBE2G1P62253 170 aa0.26□□□□□ -2.37
PCM1-220ENST00000523896 RPL39P62891 51 aaKnown RBP0.26□□□□□ -2.37
PCM1-220ENST00000523896 SMIM15Q7Z3B0 74 aa0.26□□□□□ -2.37
PCM1-220ENST00000523896 SPANXA1Q9NS26 97 aa0.26□□□□□ -2.37
PCM1-220ENST00000523896 ERG28Q9UKR5 140 aa0.26□□□□□ -2.37
PCM1-220ENST00000523896 TRAV1-2A0A0B4J238 106 aa0.25□□□□□ -2.37
PCM1-220ENST00000523896 A0A1B0GV72 72 aa0.25□□□□□ -2.37
PCM1-220ENST00000523896 ZNF815PA8K554 130 aa0.25□□□□□ -2.37
PCM1-220ENST00000523896 IFI27P40305 119 aaPredicted RBP0.25□□□□□ -2.37
PCM1-220ENST00000523896 LINC00158P58513 81 aa0.25□□□□□ -2.37
PCM1-220ENST00000523896 LSM3P62310 102 aaKnown RBP0.25□□□□□ -2.37
PCM1-220ENST00000523896 COX17Q14061 63 aa0.25□□□□□ -2.37
PCM1-220ENST00000523896 S100A7L2Q5SY68 101 aa0.25□□□□□ -2.37
PCM1-220ENST00000523896 TMEM91Q6ZNR0 172 aa0.25□□□□□ -2.37
PCM1-220ENST00000523896 DEFB107AQ8IZN7 70 aa0.25□□□□□ -2.37
PCM1-220ENST00000523896 CDKN2A-AS1Q9UH64 79 aa0.25□□□□□ -2.37
PCM1-220ENST00000523896 LOC101927531A0A1B0GV80 90 aa0.24□□□□□ -2.37
PCM1-220ENST00000523896 HIGD1CA8MV81 97 aa0.24□□□□□ -2.37
PCM1-220ENST00000523896 HBDP02042 147 aa0.24□□□□□ -2.37
PCM1-220ENST00000523896 MT-ATP8P03928 68 aa0.24□□□□□ -2.37
PCM1-220ENST00000523896 IGLC6P0CF74 106 aa0.24□□□□□ -2.37
PCM1-220ENST00000523896 TMEM128Q5BJH2 165 aa0.24□□□□□ -2.37
PCM1-220ENST00000523896 S100A16Q96FQ6 103 aaKnown RBP0.24□□□□□ -2.37
PCM1-220ENST00000523896 TMEM141Q96I45 108 aa0.24□□□□□ -2.37
PCM1-220ENST00000523896 SMIM7Q9BQ49 75 aa0.24□□□□□ -2.37
PCM1-220ENST00000523896 SCP2D1Q9UJQ7 156 aa0.24□□□□□ -2.37
PCM1-220ENST00000523896 A0A087WVE0 104 aa0.23□□□□□ -2.37
PCM1-220ENST00000523896 LINC01546A6NGU7 62 aa0.23□□□□□ -2.37
PCM1-220ENST00000523896 F2Z2F3 143 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms