RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 TEN1Q86WV5 123 aa6.17□□□□□ -1.42
SRGAP3-212ENST00000520860 KMT2DO14686 5537 aa6.17□□□□□ -1.42
SRGAP3-212ENST00000520860 MDN1Q9NU22 5596 aa6.16□□□□□ -1.42
SRGAP3-212ENST00000520860 GHRHP01286 108 aa6.16□□□□□ -1.42
SRGAP3-212ENST00000520860 COX6CP09669 75 aa6.16□□□□□ -1.42
SRGAP3-212ENST00000520860 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.16□□□□□ -1.42
SRGAP3-212ENST00000520860 PSMB2P49721 201 aa6.13□□□□□ -1.43
SRGAP3-212ENST00000520860 K7ERJ3 54 aa6.12□□□□□ -1.43
SRGAP3-212ENST00000520860 SNCGO76070 127 aa6.12□□□□□ -1.43
SRGAP3-212ENST00000520860 SPINK7P58062 85 aa6.12□□□□□ -1.43
SRGAP3-212ENST00000520860 C9orf118A6NHY6 69 aa6.11□□□□□ -1.43
SRGAP3-212ENST00000520860 TAX1BP3O14907 124 aa6.1□□□□□ -1.43
SRGAP3-212ENST00000520860 IGKV4-1P06312 121 aa6.1□□□□□ -1.43
SRGAP3-212ENST00000520860 SCGB1C2P0DMR2 95 aa6.1□□□□□ -1.43
SRGAP3-212ENST00000520860 FABP2P12104 132 aa6.1□□□□□ -1.43
SRGAP3-212ENST00000520860 H0YGX0 51 aa6.09□□□□□ -1.43
SRGAP3-212ENST00000520860 WFDC13Q8IUB5 93 aa6.08□□□□□ -1.44
SRGAP3-212ENST00000520860 A0A1W2PPM0 123 aa6.07□□□□□ -1.44
SRGAP3-212ENST00000520860 A0A1W2PNM2 257 aa6.06□□□□□ -1.44
SRGAP3-212ENST00000520860 GTF2H5Q6ZYL4 71 aa6.06□□□□□ -1.44
SRGAP3-212ENST00000520860 ZCCHC13Q8WW36 166 aaKnown RBP6.06□□□□□ -1.44
SRGAP3-212ENST00000520860 IGHV6-1A0A0B4J1U7 121 aa6.05□□□□□ -1.44
SRGAP3-212ENST00000520860 A0A1B0GX51 115 aa6.05□□□□□ -1.44
SRGAP3-212ENST00000520860 TRIAP1O43715 76 aa6.05□□□□□ -1.44
SRGAP3-212ENST00000520860 FAM218AQ96MZ4 157 aa6.05□□□□□ -1.44
SRGAP3-212ENST00000520860 NDUFV3P56181 108 aaKnown RBP6.04□□□□□ -1.44
SRGAP3-212ENST00000520860 ATXN8Q156A1 80 aa6.04□□□□□ -1.44
SRGAP3-212ENST00000520860 DNAL4O96015 105 aa6.03□□□□□ -1.44
SRGAP3-212ENST00000520860 SPCS1Q9Y6A9 102 aa6.03□□□□□ -1.44
SRGAP3-212ENST00000520860 NAA38Q9BRA0 125 aaKnown RBP6.02□□□□□ -1.45
SRGAP3-212ENST00000520860 H3BQ85 93 aa6.01□□□□□ -1.45
SRGAP3-212ENST00000520860 Q5VV11 94 aa6.01□□□□□ -1.45
SRGAP3-212ENST00000520860 H3BMG7 143 aa6□□□□□ -1.45
SRGAP3-212ENST00000520860 K7EP34 96 aa6□□□□□ -1.45
SRGAP3-212ENST00000520860 TRACP01848 142 aa6□□□□□ -1.45
SRGAP3-212ENST00000520860 MT1BP07438 61 aa6□□□□□ -1.45
SRGAP3-212ENST00000520860 KRTAP10-5P60370 271 aa6□□□□□ -1.45
SRGAP3-212ENST00000520860 DEFB116Q30KQ4 102 aa6□□□□□ -1.45
SRGAP3-212ENST00000520860 A0A1B0GV90 55 aa5.98□□□□□ -1.45
SRGAP3-212ENST00000520860 C8orf87E5RJ46 101 aa5.98□□□□□ -1.45
SRGAP3-212ENST00000520860 KRTAP2-2Q9BYT5 123 aa5.98□□□□□ -1.45
SRGAP3-212ENST00000520860 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
SRGAP3-212ENST00000520860 H1FX-AS1Q4G0G2 97 aa5.97□□□□□ -1.45
SRGAP3-212ENST00000520860 SPRR2EP22531 72 aa5.96□□□□□ -1.46
SRGAP3-212ENST00000520860 SPRR2BP35325 72 aa5.96□□□□□ -1.46
SRGAP3-212ENST00000520860 SPRR2AP35326 72 aa5.96□□□□□ -1.46
SRGAP3-212ENST00000520860 UBE2V1Q13404 147 aa5.96□□□□□ -1.46
SRGAP3-212ENST00000520860 F8W1H4 67 aa5.95□□□□□ -1.46
SRGAP3-212ENST00000520860 ORMDL1Q9P0S3 153 aa5.95□□□□□ -1.46
SRGAP3-212ENST00000520860 H3BT86 120 aa5.94□□□□□ -1.46
SRGAP3-212ENST00000520860 TMEM256-PLSCR3K7ERE1 68 aa5.94□□□□□ -1.46
SRGAP3-212ENST00000520860 LINC00472Q9H8W2 130 aa5.94□□□□□ -1.46
SRGAP3-212ENST00000520860 TRBV7-4A0A0J9YYF1 115 aa5.93□□□□□ -1.46
SRGAP3-212ENST00000520860 A0A1B0GVX0 72 aa5.93□□□□□ -1.46
SRGAP3-212ENST00000520860 C9JAW5 83 aa5.93□□□□□ -1.46
SRGAP3-212ENST00000520860 FAM236AA0A1B0GUQ0 79 aa5.91□□□□□ -1.46
SRGAP3-212ENST00000520860 FAM236BA0A1B0GV22 79 aa5.91□□□□□ -1.46
SRGAP3-212ENST00000520860 BAALC-AS2P0C853 105 aa5.9□□□□□ -1.46
SRGAP3-212ENST00000520860 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.46
SRGAP3-212ENST00000520860 ANKRD29Q8N6D5 301 aa5.9□□□□□ -1.46
SRGAP3-212ENST00000520860 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
SRGAP3-212ENST00000520860 C21orf62-AS1Q17RA5 79 aa5.89□□□□□ -1.47
SRGAP3-212ENST00000520860 JMJD7-PLA2G4BH0Y9G9 81 aa5.88□□□□□ -1.47
SRGAP3-212ENST00000520860 DSCR8Q96T75 97 aa5.88□□□□□ -1.47
SRGAP3-212ENST00000520860 GPR98Q8WXG9 6306 aa5.87□□□□□ -1.47
SRGAP3-212ENST00000520860 IMUPQ9GZP8 106 aa5.85□□□□□ -1.47
SRGAP3-212ENST00000520860 PRO0461Q9UI25 63 aa5.85□□□□□ -1.47
SRGAP3-212ENST00000520860 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.47
SRGAP3-212ENST00000520860 IGKV3D-7A0A0C4DH55 119 aa5.83□□□□□ -1.48
SRGAP3-212ENST00000520860 A0A1B0GV72 72 aa5.83□□□□□ -1.48
SRGAP3-212ENST00000520860 CCKP06307 115 aa5.83□□□□□ -1.48
SRGAP3-212ENST00000520860 PDE6GP18545 87 aa5.83□□□□□ -1.48
SRGAP3-212ENST00000520860 J3QR89 54 aa5.82□□□□□ -1.48
SRGAP3-212ENST00000520860 RBM3P98179 157 aaKnown RBP5.82□□□□□ -1.48
SRGAP3-212ENST00000520860 ETDBQ3ZM63 59 aa5.81□□□□□ -1.48
SRGAP3-212ENST00000520860 SMCPP49901 116 aaPredicted RBP5.8□□□□□ -1.48
SRGAP3-212ENST00000520860 J3KT08 172 aa5.79□□□□□ -1.48
SRGAP3-212ENST00000520860 NDUFB1O75438 58 aa5.78□□□□□ -1.48
SRGAP3-212ENST00000520860 LCE1AQ5T7P2 110 aa5.77□□□□□ -1.49
SRGAP3-212ENST00000520860 LOC110117498A0A087WWA1 95 aa5.76□□□□□ -1.49
SRGAP3-212ENST00000520860 A0A1B0GW54 56 aa5.76□□□□□ -1.49
SRGAP3-212ENST00000520860 K7ERU9 68 aa5.76□□□□□ -1.49
SRGAP3-212ENST00000520860 SPRR2DP22532 72 aa5.76□□□□□ -1.49
SRGAP3-212ENST00000520860 C5orf47Q569G3 176 aa5.76□□□□□ -1.49
SRGAP3-212ENST00000520860 VPS25Q9BRG1 176 aa5.76□□□□□ -1.49
SRGAP3-212ENST00000520860 C14orf132Q9NPU4 83 aa5.75□□□□□ -1.49
SRGAP3-212ENST00000520860 C8orf17Q9NRJ1 99 aa5.75□□□□□ -1.49
SRGAP3-212ENST00000520860 ACYP1P07311 99 aa5.74□□□□□ -1.49
SRGAP3-212ENST00000520860 FAM240AA0A1B0GVK7 77 aa5.72□□□□□ -1.49
SRGAP3-212ENST00000520860 Q6ZQT0 140 aa5.72□□□□□ -1.49
SRGAP3-212ENST00000520860 Q6ZVQ6 151 aa5.7□□□□□ -1.5
SRGAP3-212ENST00000520860 IGKV2D-30A0A075B6S6 120 aa5.69□□□□□ -1.5
SRGAP3-212ENST00000520860 IGKV2-30P06310 120 aa5.69□□□□□ -1.5
SRGAP3-212ENST00000520860 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
SRGAP3-212ENST00000520860 KLKP1Q107X0 134 aa5.67□□□□□ -1.5
SRGAP3-212ENST00000520860 UBL5Q9BZL1 73 aa5.67□□□□□ -1.5
SRGAP3-212ENST00000520860 C7orf65Q6ZTY9 151 aa5.66□□□□□ -1.5
SRGAP3-212ENST00000520860 CSAG1Q6PB30 78 aa5.65□□□□□ -1.5
SRGAP3-212ENST00000520860 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
SRGAP3-212ENST00000520860 NREPQ16612 68 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms