RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-211ENST00000520846 CEP290O15078 2479 aa-1.55□□□□□ -2.66
MSR1-211ENST00000520846 TMEM131LA2VDJ0 1609 aa-1.55□□□□□ -2.66
MSR1-211ENST00000520846 CSMD2Q7Z408 3487 aa-1.57□□□□□ -2.66
MSR1-211ENST00000520846 SPEGQ15772 3267 aa-1.57□□□□□ -2.66
MSR1-211ENST00000520846 LCE6AA0A183 80 aa-1.57□□□□□ -2.66
MSR1-211ENST00000520846 CEBPZOSA8MTT3 80 aa-1.57□□□□□ -2.66
MSR1-211ENST00000520846 SNRPFP62306 86 aaKnown RBP-1.57□□□□□ -2.66
MSR1-211ENST00000520846 RABAC1Q9UI14 185 aa-1.57□□□□□ -2.66
MSR1-211ENST00000520846 MAGI3Q5TCQ9 1506 aa-1.57□□□□□ -2.66
MSR1-211ENST00000520846 NCOA2Q15596 1464 aa-1.57□□□□□ -2.66
MSR1-211ENST00000520846 PYY3Q5JQD4 70 aa-1.58□□□□□ -2.66
MSR1-211ENST00000520846 LINC00643Q86TS7 51 aa-1.58□□□□□ -2.66
MSR1-211ENST00000520846 CDC42BPGQ6DT37 1551 aa-1.59□□□□□ -2.66
MSR1-211ENST00000520846 URB2Q14146 1524 aaKnown RBP-1.59□□□□□ -2.66
MSR1-211ENST00000520846 ACYP1P07311 99 aa-1.59□□□□□ -2.66
MSR1-211ENST00000520846 KRTAP8-1Q8IUC2 63 aa-1.59□□□□□ -2.66
MSR1-211ENST00000520846 DMDP11532 3685 aa-1.6□□□□□ -2.66
MSR1-211ENST00000520846 ZNF831Q5JPB2 1677 aa-1.6□□□□□ -2.67
MSR1-211ENST00000520846 SPTAN1Q13813 2472 aaKnown RBP-1.61□□□□□ -2.67
MSR1-211ENST00000520846 ARFGEF2Q9Y6D5 1785 aa-1.61□□□□□ -2.67
MSR1-211ENST00000520846 LYNX1G3V0Z9 82 aa-1.61□□□□□ -2.67
MSR1-211ENST00000520846 DEFB4AO15263 64 aa-1.61□□□□□ -2.67
MSR1-211ENST00000520846 IFI6P09912 130 aa-1.61□□□□□ -2.67
MSR1-211ENST00000520846 MGAQ8IWI9 3026 aa-1.62□□□□□ -2.67
MSR1-211ENST00000520846 DIP2BQ9P265 1576 aa-1.62□□□□□ -2.67
MSR1-211ENST00000520846 IFI27P40305 119 aaPredicted RBP-1.62□□□□□ -2.67
MSR1-211ENST00000520846 S100A16Q96FQ6 103 aaKnown RBP-1.62□□□□□ -2.67
MSR1-211ENST00000520846 CENPEQ02224 2701 aa-1.62□□□□□ -2.67
MSR1-211ENST00000520846 DEFB130BP0DP73 79 aa-1.63□□□□□ -2.67
MSR1-211ENST00000520846 DEFB130AP0DP74 79 aa-1.63□□□□□ -2.67
MSR1-211ENST00000520846 Q9H521 79 aa-1.63□□□□□ -2.67
MSR1-211ENST00000520846 CCNB3Q8WWL7 1395 aa-1.63□□□□□ -2.67
MSR1-211ENST00000520846 DDX60LQ5H9U9 1706 aaKnown RBP-1.63□□□□□ -2.67
MSR1-211ENST00000520846 UMAD1C9J7I0 102 aa-1.64□□□□□ -2.67
MSR1-211ENST00000520846 IAPPP10997 89 aa-1.64□□□□□ -2.67
MSR1-211ENST00000520846 CEP350Q5VT06 3117 aa-1.64□□□□□ -2.67
MSR1-211ENST00000520846 CCDC88BA6NC98 1476 aa-1.64□□□□□ -2.67
MSR1-211ENST00000520846 DCHS1Q96JQ0 3298 aa-1.64□□□□□ -2.67
MSR1-211ENST00000520846 ABCC3O15438 1527 aa-1.65□□□□□ -2.67
MSR1-211ENST00000520846 WDFY3Q8IZQ1 3526 aa-1.65□□□□□ -2.67
MSR1-211ENST00000520846 MT1FP04733 61 aa-1.66□□□□□ -2.68
MSR1-211ENST00000520846 PIK3C2BO00750 1634 aa-1.66□□□□□ -2.68
MSR1-211ENST00000520846 KIF14Q15058 1648 aa-1.66□□□□□ -2.68
MSR1-211ENST00000520846 MAP3K4Q9Y6R4 1608 aa-1.66□□□□□ -2.68
MSR1-211ENST00000520846 CFAP54Q96N23 3096 aa-1.67□□□□□ -2.68
MSR1-211ENST00000520846 CLPSL2Q6UWE3 100 aa-1.67□□□□□ -2.68
MSR1-211ENST00000520846 NDUFA4O00483 81 aa-1.68□□□□□ -2.68
MSR1-211ENST00000520846 DEFB106AQ8N104 65 aa-1.68□□□□□ -2.68
MSR1-211ENST00000520846 V9GYS6 101 aa-1.68□□□□□ -2.68
MSR1-211ENST00000520846 PPLO60437 1756 aa-1.69□□□□□ -2.68
MSR1-211ENST00000520846 PVALEFA0A1B0GWK0 134 aa-1.69□□□□□ -2.68
MSR1-211ENST00000520846 WDFY4Q6ZS81 3184 aa-1.7□□□□□ -2.68
MSR1-211ENST00000520846 EP400Q96L91 3159 aa-1.7□□□□□ -2.68
MSR1-211ENST00000520846 PLCH1Q4KWH8 1693 aa-1.71□□□□□ -2.68
MSR1-211ENST00000520846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.71□□□□□ -2.68
MSR1-211ENST00000520846 CRYBG3Q68DQ2 2970 aa-1.71□□□□□ -2.68
MSR1-211ENST00000520846 ITSN1Q15811 1721 aa-1.72□□□□□ -2.69
MSR1-211ENST00000520846 THOC2Q8NI27 1593 aaKnown RBP-1.72□□□□□ -2.69
MSR1-211ENST00000520846 KANTRA0A1W2PQU2 76 aa-1.73□□□□□ -2.69
MSR1-211ENST00000520846 FRYLO94915 3013 aa-1.74□□□□□ -2.69
MSR1-211ENST00000520846 NREPQ16612 68 aa-1.74□□□□□ -2.69
MSR1-211ENST00000520846 TTC37Q6PGP7 1564 aa-1.75□□□□□ -2.69
MSR1-211ENST00000520846 ATP5EP2Q5VTU8 51 aa-1.75□□□□□ -2.69
MSR1-211ENST00000520846 ANKRD36CQ5JPF3 1778 aa-1.75□□□□□ -2.69
MSR1-211ENST00000520846 DEFB131BA0A096LNP1 70 aa-1.76□□□□□ -2.69
MSR1-211ENST00000520846 DNAH14Q0VDD8 3507 aa-1.76□□□□□ -2.69
MSR1-211ENST00000520846 CFAP43Q8NDM7 1665 aa-1.77□□□□□ -2.69
MSR1-211ENST00000520846 VPS13CQ709C8 3753 aa-1.77□□□□□ -2.69
MSR1-211ENST00000520846 HMGA1P17096 107 aaKnown RBP-1.77□□□□□ -2.69
MSR1-211ENST00000520846 RPS29P62273 56 aaKnown RBP-1.77□□□□□ -2.69
MSR1-211ENST00000520846 MUC3AQ02505 3323 aa-1.77□□□□□ -2.69
MSR1-211ENST00000520846 RICTORQ6R327 1708 aa-1.79□□□□□ -2.7
MSR1-211ENST00000520846 MRPL33O75394 65 aaKnown RBP-1.79□□□□□ -2.7
MSR1-211ENST00000520846 CDC42BPAQ5VT25 1732 aa-1.8□□□□□ -2.7
MSR1-211ENST00000520846 ZC3H13Q5T200 1668 aaKnown RBP-1.8□□□□□ -2.7
MSR1-211ENST00000520846 SZT2Q5T011 3432 aa-1.8□□□□□ -2.7
MSR1-211ENST00000520846 PCNTO95613 3336 aa-1.8□□□□□ -2.7
MSR1-211ENST00000520846 UACAQ9BZF9 1416 aa-1.81□□□□□ -2.7
MSR1-211ENST00000520846 KIAA0586Q9BVV6 1533 aa-1.81□□□□□ -2.7
MSR1-211ENST00000520846 A0A087WXM4 84 aa-1.82□□□□□ -2.7
MSR1-211ENST00000520846 TDRG1Q3Y452 100 aa-1.82□□□□□ -2.7
MSR1-211ENST00000520846 TJP1Q07157 1748 aa-1.83□□□□□ -2.7
MSR1-211ENST00000520846 PARP4Q9UKK3 1724 aaKnown RBP-1.83□□□□□ -2.7
MSR1-211ENST00000520846 TNP1P09430 55 aa-1.83□□□□□ -2.7
MSR1-211ENST00000520846 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.83□□□□□ -2.7
MSR1-211ENST00000520846 TOGARAM1Q9Y4F4 1720 aa-1.84□□□□□ -2.7
MSR1-211ENST00000520846 HFM1A2PYH4 1435 aa-1.84□□□□□ -2.7
MSR1-211ENST00000520846 A8MTW9 85 aa-1.85□□□□□ -2.71
MSR1-211ENST00000520846 SMIM13P0DJ93 91 aa-1.85□□□□□ -2.71
MSR1-211ENST00000520846 DEFB121Q5J5C9 76 aa-1.85□□□□□ -2.71
MSR1-211ENST00000520846 ITSN2Q9NZM3 1697 aa-1.86□□□□□ -2.71
MSR1-211ENST00000520846 MKI67P46013 3256 aaKnown RBP-1.86□□□□□ -2.71
MSR1-211ENST00000520846 KDM5DQ9BY66 1539 aa-1.86□□□□□ -2.71
MSR1-211ENST00000520846 ARHGAP35Q9NRY4 1499 aa-1.87□□□□□ -2.71
MSR1-211ENST00000520846 WT1-ASQ06250 92 aa-1.87□□□□□ -2.71
MSR1-211ENST00000520846 UBL5Q9BZL1 73 aa-1.87□□□□□ -2.71
MSR1-211ENST00000520846 KCNQ1DNQ9H478 68 aa-1.87□□□□□ -2.71
MSR1-211ENST00000520846 CFAP47Q6ZTR5 3102 aa-1.87□□□□□ -2.71
MSR1-211ENST00000520846 LOC400499M0QZD8 3231 aa-1.88□□□□□ -2.71
MSR1-211ENST00000520846 MMP24-AS1A0A0U1RRL7 71 aa-1.88□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms