RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 A0A087WSZ3 146 aa2.44□□□□□ -2.02
CTNNA1-216ENST00000519489 IGHV6-1A0A0B4J1U7 121 aa2.44□□□□□ -2.02
CTNNA1-216ENST00000519489 C9JQL5 133 aa2.44□□□□□ -2.02
CTNNA1-216ENST00000519489 H0YAA0 97 aa2.44□□□□□ -2.02
CTNNA1-216ENST00000519489 IGKV4-1P06312 121 aa2.44□□□□□ -2.02
CTNNA1-216ENST00000519489 SLC51BQ86UW2 128 aa2.44□□□□□ -2.02
CTNNA1-216ENST00000519489 PRR15Q8IV56 129 aa2.44□□□□□ -2.02
CTNNA1-216ENST00000519489 SPANXCQ9NY87 97 aa2.44□□□□□ -2.02
CTNNA1-216ENST00000519489 MT1GP13640 62 aa2.43□□□□□ -2.02
CTNNA1-216ENST00000519489 PRAC1Q96KF2 57 aa2.43□□□□□ -2.02
CTNNA1-216ENST00000519489 CRIPTQ9P021 101 aa2.43□□□□□ -2.02
CTNNA1-216ENST00000519489 LEPROTO15243 131 aa2.42□□□□□ -2.02
CTNNA1-216ENST00000519489 DEFB116Q30KQ4 102 aa2.42□□□□□ -2.02
CTNNA1-216ENST00000519489 LYRM7Q5U5X0 104 aa2.42□□□□□ -2.02
CTNNA1-216ENST00000519489 LINC00308Q8TCZ7 52 aa2.42□□□□□ -2.02
CTNNA1-216ENST00000519489 J3QQQ9 107 aa2.41□□□□□ -2.02
CTNNA1-216ENST00000519489 C3orf79P0CE67 100 aa2.4□□□□□ -2.03
CTNNA1-216ENST00000519489 Q6ZQY7 126 aa2.4□□□□□ -2.03
CTNNA1-216ENST00000519489 SNHG12Q9BXW3 62 aa2.4□□□□□ -2.03
CTNNA1-216ENST00000519489 TRAV12-1A0A0B4J245 112 aa2.39□□□□□ -2.03
CTNNA1-216ENST00000519489 SERF1AO75920 110 aa2.39□□□□□ -2.03
CTNNA1-216ENST00000519489 CSAG1Q6PB30 78 aa2.39□□□□□ -2.03
CTNNA1-216ENST00000519489 TEN1Q86WV5 123 aa2.39□□□□□ -2.03
CTNNA1-216ENST00000519489 PLAC4Q8WY50 150 aa2.39□□□□□ -2.03
CTNNA1-216ENST00000519489 A6NDN8 102 aa2.38□□□□□ -2.03
CTNNA1-216ENST00000519489 H0Y8G0 127 aa2.38□□□□□ -2.03
CTNNA1-216ENST00000519489 LINC00614P0C842 121 aa2.38□□□□□ -2.03
CTNNA1-216ENST00000519489 MT-ND4LP03901 98 aa2.37□□□□□ -2.03
CTNNA1-216ENST00000519489 FABP9Q0Z7S8 132 aa2.37□□□□□ -2.03
CTNNA1-216ENST00000519489 PEA15Q15121 130 aa2.37□□□□□ -2.03
CTNNA1-216ENST00000519489 IFI27L1Q96BM0 104 aa2.37□□□□□ -2.03
CTNNA1-216ENST00000519489 HERVK_113P61574 105 aa2.36□□□□□ -2.03
CTNNA1-216ENST00000519489 DSCR8Q96T75 97 aa2.36□□□□□ -2.03
CTNNA1-216ENST00000519489 IGKV3D-7A0A0C4DH55 119 aa2.35□□□□□ -2.03
CTNNA1-216ENST00000519489 hADV29S1A0JD25 119 aa2.35□□□□□ -2.03
CTNNA1-216ENST00000519489 LINC00575Q6W349 94 aa2.35□□□□□ -2.03
CTNNA1-216ENST00000519489 C8orf87E5RJ46 101 aa2.34□□□□□ -2.03
CTNNA1-216ENST00000519489 C4orf26Q17RF5 130 aa2.34□□□□□ -2.03
CTNNA1-216ENST00000519489 SMIM11BQ8TCY0 68 aa2.34□□□□□ -2.03
CTNNA1-216ENST00000519489 SEC11CQ9BY50 192 aa2.34□□□□□ -2.03
CTNNA1-216ENST00000519489 LINC00472Q9H8W2 130 aa2.34□□□□□ -2.03
CTNNA1-216ENST00000519489 VAMP3Q15836 100 aa2.33□□□□□ -2.04
CTNNA1-216ENST00000519489 S4R3F8 94 aa2.33□□□□□ -2.04
CTNNA1-216ENST00000519489 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
CTNNA1-216ENST00000519489 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
CTNNA1-216ENST00000519489 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
CTNNA1-216ENST00000519489 TCTE3Q8IZS6 198 aa2.32□□□□□ -2.04
CTNNA1-216ENST00000519489 C18orf32Q8TCD1 76 aa2.32□□□□□ -2.04
CTNNA1-216ENST00000519489 A0A1B0GVX0 72 aa2.31□□□□□ -2.04
CTNNA1-216ENST00000519489 A8MUN3 132 aa2.31□□□□□ -2.04
CTNNA1-216ENST00000519489 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.31□□□□□ -2.04
CTNNA1-216ENST00000519489 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
CTNNA1-216ENST00000519489 HSPB8Q9UJY1 196 aa2.31□□□□□ -2.04
CTNNA1-216ENST00000519489 TIMM17BO60830 172 aa2.3□□□□□ -2.04
CTNNA1-216ENST00000519489 PLNP26678 52 aa2.3□□□□□ -2.04
CTNNA1-216ENST00000519489 RGS21Q2M5E4 152 aa2.3□□□□□ -2.04
CTNNA1-216ENST00000519489 PPDPFLQ8WWR9 84 aa2.3□□□□□ -2.04
CTNNA1-216ENST00000519489 RAB37Q96AX2 223 aa2.3□□□□□ -2.04
CTNNA1-216ENST00000519489 PMCHL2Q9BQD1 86 aa2.3□□□□□ -2.04
CTNNA1-216ENST00000519489 PDE6GP18545 87 aa2.29□□□□□ -2.04
CTNNA1-216ENST00000519489 Q6ZVQ6 151 aa2.29□□□□□ -2.04
CTNNA1-216ENST00000519489 MT1LQ93083 61 aa2.29□□□□□ -2.04
CTNNA1-216ENST00000519489 DPM2O94777 84 aa2.28□□□□□ -2.04
CTNNA1-216ENST00000519489 NDUFV3P56181 108 aaKnown RBP2.28□□□□□ -2.04
CTNNA1-216ENST00000519489 PRO0461Q9UI25 63 aa2.28□□□□□ -2.04
CTNNA1-216ENST00000519489 H3BMG7 143 aa2.27□□□□□ -2.05
CTNNA1-216ENST00000519489 IGKCP01834 107 aa2.27□□□□□ -2.05
CTNNA1-216ENST00000519489 C12orf57Q99622 126 aa2.27□□□□□ -2.05
CTNNA1-216ENST00000519489 TRAPPC1Q9Y5R8 145 aa2.27□□□□□ -2.05
CTNNA1-216ENST00000519489 E9PLD3 99 aa2.26□□□□□ -2.05
CTNNA1-216ENST00000519489 S100PP25815 95 aa2.26□□□□□ -2.05
CTNNA1-216ENST00000519489 COX19Q49B96 90 aa2.26□□□□□ -2.05
CTNNA1-216ENST00000519489 TRGC2P03986 189 aa2.25□□□□□ -2.05
CTNNA1-216ENST00000519489 KRTAP19-5Q3LI72 72 aa2.25□□□□□ -2.05
CTNNA1-216ENST00000519489 MUSTN1Q8IVN3 82 aa2.24□□□□□ -2.05
CTNNA1-216ENST00000519489 COPS9Q8WXC6 57 aa2.24□□□□□ -2.05
CTNNA1-216ENST00000519489 TTTY13Q9BZ97 58 aa2.24□□□□□ -2.05
CTNNA1-216ENST00000519489 A0A087WVE0 104 aa2.23□□□□□ -2.05
CTNNA1-216ENST00000519489 A0A1B0GV72 72 aa2.23□□□□□ -2.05
CTNNA1-216ENST00000519489 C7orf65Q6ZTY9 151 aa2.23□□□□□ -2.05
CTNNA1-216ENST00000519489 C2orf91Q6ZV80 131 aa2.23□□□□□ -2.05
CTNNA1-216ENST00000519489 CHCHD1Q96BP2 118 aaKnown RBP2.23□□□□□ -2.05
CTNNA1-216ENST00000519489 TRBV7-4A0A0J9YYF1 115 aa2.22□□□□□ -2.05
CTNNA1-216ENST00000519489 HSBP1O75506 76 aa2.22□□□□□ -2.05
CTNNA1-216ENST00000519489 LEPROTL1O95214 131 aa2.22□□□□□ -2.05
CTNNA1-216ENST00000519489 IFITM1P13164 125 aa2.22□□□□□ -2.05
CTNNA1-216ENST00000519489 Q5W150 140 aa2.22□□□□□ -2.05
CTNNA1-216ENST00000519489 SCGB1D4Q6XE38 83 aa2.22□□□□□ -2.05
CTNNA1-216ENST00000519489 ANKRD29Q8N6D5 301 aa2.22□□□□□ -2.05
CTNNA1-216ENST00000519489 C8orf17Q9NRJ1 99 aa2.22□□□□□ -2.05
CTNNA1-216ENST00000519489 TRACP01848 142 aa2.21□□□□□ -2.06
CTNNA1-216ENST00000519489 FABP2P12104 132 aa2.21□□□□□ -2.06
CTNNA1-216ENST00000519489 NDUFS5O43920 106 aa2.2□□□□□ -2.06
CTNNA1-216ENST00000519489 NDUFB1O75438 58 aa2.2□□□□□ -2.06
CTNNA1-216ENST00000519489 FABP4P15090 132 aa2.19□□□□□ -2.06
CTNNA1-216ENST00000519489 K7EQZ3 153 aa2.18□□□□□ -2.06
CTNNA1-216ENST00000519489 CCKP06307 115 aa2.18□□□□□ -2.06
CTNNA1-216ENST00000519489 BVES-AS1Q5T3Y7 98 aa2.18□□□□□ -2.06
CTNNA1-216ENST00000519489 C1orf64Q8NEQ6 169 aa2.18□□□□□ -2.06
CTNNA1-216ENST00000519489 J3KT08 172 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 215 ms