RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 IGKV2-29A2NJV5 120 aaPredicted RBP3.49□□□□□ -1.85
PABPC1-207ENST00000518716 F8WEM9 126 aa3.49□□□□□ -1.85
PABPC1-207ENST00000518716 KRTAP4-16G5E9R7 235 aaPredicted RBP3.49□□□□□ -1.85
PABPC1-207ENST00000518716 MGPP08493 103 aa3.49□□□□□ -1.85
PABPC1-207ENST00000518716 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
PABPC1-207ENST00000518716 SMCR5Q8TEV8 140 aa3.49□□□□□ -1.85
PABPC1-207ENST00000518716 CDC42SE2Q9NRR3 84 aa3.49□□□□□ -1.85
PABPC1-207ENST00000518716 IGLV8-61A0A075B6I0 122 aa3.48□□□□□ -1.85
PABPC1-207ENST00000518716 IGLV4-3A0A075B6K6 122 aa3.48□□□□□ -1.85
PABPC1-207ENST00000518716 TRAV23DV6A0A075B6W5 121 aa3.48□□□□□ -1.85
PABPC1-207ENST00000518716 LINC01547P58512 204 aaPredicted RBP3.48□□□□□ -1.85
PABPC1-207ENST00000518716 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
PABPC1-207ENST00000518716 CNFNQ9BYD5 112 aa3.48□□□□□ -1.85
PABPC1-207ENST00000518716 V9GYV3 84 aa3.48□□□□□ -1.85
PABPC1-207ENST00000518716 TRAV22A0A0B4J277 110 aa3.47□□□□□ -1.85
PABPC1-207ENST00000518716 PPP1R17O96001 155 aa3.47□□□□□ -1.85
PABPC1-207ENST00000518716 TLX1NBP0CAT3 122 aa3.47□□□□□ -1.85
PABPC1-207ENST00000518716 PLNP26678 52 aa3.47□□□□□ -1.85
PABPC1-207ENST00000518716 SMIM29Q86T20 159 aa3.47□□□□□ -1.85
PABPC1-207ENST00000518716 SPTSSBQ8NFR3 76 aa3.47□□□□□ -1.85
PABPC1-207ENST00000518716 RPL39LQ96EH5 51 aaKnown RBP3.47□□□□□ -1.85
PABPC1-207ENST00000518716 KRTAP4-1Q9BYQ7 146 aa3.47□□□□□ -1.85
PABPC1-207ENST00000518716 TTTY13Q9BZ97 58 aa3.47□□□□□ -1.85
PABPC1-207ENST00000518716 C14orf132Q9NPU4 83 aa3.47□□□□□ -1.85
PABPC1-207ENST00000518716 TRBV6-5A0A0K0K1A5 114 aa3.46□□□□□ -1.86
PABPC1-207ENST00000518716 SDHAF1A6NFY7 115 aa3.46□□□□□ -1.86
PABPC1-207ENST00000518716 ZNF861PO60384 105 aa3.46□□□□□ -1.86
PABPC1-207ENST00000518716 CFC1BP0CG36 223 aa3.46□□□□□ -1.86
PABPC1-207ENST00000518716 CFC1P0CG37 223 aa3.46□□□□□ -1.86
PABPC1-207ENST00000518716 LYZL1Q6UWQ5 148 aa3.46□□□□□ -1.86
PABPC1-207ENST00000518716 C8orf17Q9NRJ1 99 aa3.46□□□□□ -1.86
PABPC1-207ENST00000518716 I3L3M4 83 aa3.45□□□□□ -1.86
PABPC1-207ENST00000518716 BPY2O14599 106 aa3.45□□□□□ -1.86
PABPC1-207ENST00000518716 ZNF22P17026 224 aaPredicted RBP3.45□□□□□ -1.86
PABPC1-207ENST00000518716 RPL37AP8A6NKH3 93 aa3.44□□□□□ -1.86
PABPC1-207ENST00000518716 SMIM1B2RUZ4 78 aa3.44□□□□□ -1.86
PABPC1-207ENST00000518716 FCER1GP30273 86 aa3.44□□□□□ -1.86
PABPC1-207ENST00000518716 POLR2KP53803 58 aaKnown RBP3.44□□□□□ -1.86
PABPC1-207ENST00000518716 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
PABPC1-207ENST00000518716 KRTAP13-2Q52LG2 175 aa3.44□□□□□ -1.86
PABPC1-207ENST00000518716 IGLV7-46A0A075B6I9 117 aa3.43□□□□□ -1.86
PABPC1-207ENST00000518716 A0A0J9YXY3 114 aa3.43□□□□□ -1.86
PABPC1-207ENST00000518716 LOC101927531A0A1B0GV80 90 aa3.43□□□□□ -1.86
PABPC1-207ENST00000518716 C11orf86A6NJI1 115 aa3.43□□□□□ -1.86
PABPC1-207ENST00000518716 CHKB-CPT1BH3BT56 60 aa3.43□□□□□ -1.86
PABPC1-207ENST00000518716 DNAL4O96015 105 aa3.43□□□□□ -1.86
PABPC1-207ENST00000518716 ROMO1P60602 79 aa3.43□□□□□ -1.86
PABPC1-207ENST00000518716 SPAG11BQ08648 103 aa3.43□□□□□ -1.86
PABPC1-207ENST00000518716 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
PABPC1-207ENST00000518716 RNASE13Q5GAN3 156 aaKnown RBP3.43□□□□□ -1.86
PABPC1-207ENST00000518716 C6orf48Q9UBA6 75 aa3.43□□□□□ -1.86
PABPC1-207ENST00000518716 A0A087WSZ3 146 aa3.42□□□□□ -1.86
PABPC1-207ENST00000518716 D6R8Y8 96 aa3.42□□□□□ -1.86
PABPC1-207ENST00000518716 ELOF1P60002 83 aaKnown RBP3.42□□□□□ -1.86
PABPC1-207ENST00000518716 C9orf129Q5T035 196 aaKnown RBP3.42□□□□□ -1.86
PABPC1-207ENST00000518716 Q5VV11 94 aa3.42□□□□□ -1.86
PABPC1-207ENST00000518716 UNQ6190/PRO20217Q6UXQ8 127 aa3.42□□□□□ -1.86
PABPC1-207ENST00000518716 MUSTN1Q8IVN3 82 aa3.42□□□□□ -1.86
PABPC1-207ENST00000518716 TYMSOSQ8TAI1 123 aa3.42□□□□□ -1.86
PABPC1-207ENST00000518716 C22orf24Q9Y442 160 aa3.42□□□□□ -1.86
PABPC1-207ENST00000518716 IGKV2D-26A0A0A0MRZ7 120 aa3.41□□□□□ -1.86
PABPC1-207ENST00000518716 LINC01546A6NGU7 62 aa3.41□□□□□ -1.86
PABPC1-207ENST00000518716 RPL28P46779 137 aaKnown RBP3.41□□□□□ -1.86
PABPC1-207ENST00000518716 Q8NDZ9 215 aa3.41□□□□□ -1.86
PABPC1-207ENST00000518716 TRAV12-1A0A0B4J245 112 aa3.4□□□□□ -1.87
PABPC1-207ENST00000518716 NDUFA1O15239 70 aa3.4□□□□□ -1.87
PABPC1-207ENST00000518716 NDUFB1O75438 58 aa3.4□□□□□ -1.87
PABPC1-207ENST00000518716 KRTAP13-1Q8IUC0 172 aa3.4□□□□□ -1.87
PABPC1-207ENST00000518716 AMELXQ99217 191 aa3.4□□□□□ -1.87
PABPC1-207ENST00000518716 ANAPC11Q9NYG5 84 aa3.4□□□□□ -1.87
PABPC1-207ENST00000518716 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
PABPC1-207ENST00000518716 TRBV7-4A0A0J9YYF1 115 aa3.39□□□□□ -1.87
PABPC1-207ENST00000518716 A6NED7 52 aa3.39□□□□□ -1.87
PABPC1-207ENST00000518716 HIGD1CA8MV81 97 aa3.39□□□□□ -1.87
PABPC1-207ENST00000518716 BAALC-AS2P0C853 105 aa3.39□□□□□ -1.87
PABPC1-207ENST00000518716 KRTAP13-3Q3SY46 172 aa3.39□□□□□ -1.87
PABPC1-207ENST00000518716 FAM229BQ4G0N7 80 aa3.39□□□□□ -1.87
PABPC1-207ENST00000518716 LINC00304Q8N9R0 145 aa3.39□□□□□ -1.87
PABPC1-207ENST00000518716 TMEM254Q8TBM7 123 aa3.39□□□□□ -1.87
PABPC1-207ENST00000518716 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
PABPC1-207ENST00000518716 SSPOA2VEC9 5147 aa3.39□□□□□ -1.87
PABPC1-207ENST00000518716 SYNE2Q8WXH0 6885 aaKnown RBP3.38□□□□□ -1.87
PABPC1-207ENST00000518716 MT1HP80294 61 aa3.38□□□□□ -1.87
PABPC1-207ENST00000518716 USH2AO75445 5202 aa3.37□□□□□ -1.87
PABPC1-207ENST00000518716 A8MWP4 228 aa3.37□□□□□ -1.87
PABPC1-207ENST00000518716 H3BPC8 53 aa3.37□□□□□ -1.87
PABPC1-207ENST00000518716 H7C2G1 150 aa3.37□□□□□ -1.87
PABPC1-207ENST00000518716 K7EMI3 77 aa3.37□□□□□ -1.87
PABPC1-207ENST00000518716 MOBPQ13875 183 aa3.37□□□□□ -1.87
PABPC1-207ENST00000518716 Q1RN00 199 aa3.37□□□□□ -1.87
PABPC1-207ENST00000518716 Q6ZQT0 140 aa3.36□□□□□ -1.87
PABPC1-207ENST00000518716 UBL5Q9BZL1 73 aa3.36□□□□□ -1.87
PABPC1-207ENST00000518716 DHRS4-AS1Q9P1J3 65 aa3.36□□□□□ -1.87
PABPC1-207ENST00000518716 SFTA2Q6UW10 78 aa3.35□□□□□ -1.87
PABPC1-207ENST00000518716 Q9BRP9 147 aa3.35□□□□□ -1.87
PABPC1-207ENST00000518716 A0A1B0GUT8 65 aa3.34□□□□□ -1.87
PABPC1-207ENST00000518716 F8VRH5 84 aa3.34□□□□□ -1.87
PABPC1-207ENST00000518716 RPL39P62891 51 aaKnown RBP3.34□□□□□ -1.87
PABPC1-207ENST00000518716 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
PABPC1-207ENST00000518716 OBSCN-AS1Q96MR7 158 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms