RNA–Protein interactions for RNA: ENST00000518018.1

TRPS1-207, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-207ENST00000518018 ZNF292O60281 2723 aa1.8□□□□□ -2.12
TRPS1-207ENST00000518018 TRIOO75962 3097 aa1.8□□□□□ -2.12
TRPS1-207ENST00000518018 ANKRD11Q6UB99 2663 aaPredicted RBP1.8□□□□□ -2.12
TRPS1-207ENST00000518018 CREBBPQ92793 2442 aa1.79□□□□□ -2.12
TRPS1-207ENST00000518018 SSBP3-AS1Q7Z2R9 100 aa1.79□□□□□ -2.12
TRPS1-207ENST00000518018 ACACBO00763 2458 aa1.79□□□□□ -2.12
TRPS1-207ENST00000518018 DMXL1Q9Y485 3027 aa1.79□□□□□ -2.12
TRPS1-207ENST00000518018 MAST4O15021 2626 aa1.78□□□□□ -2.12
TRPS1-207ENST00000518018 SPTAN1Q13813 2472 aaKnown RBP1.78□□□□□ -2.12
TRPS1-207ENST00000518018 SPINK1P00995 79 aa1.78□□□□□ -2.12
TRPS1-207ENST00000518018 PLAC4Q8WY50 150 aa1.78□□□□□ -2.12
TRPS1-207ENST00000518018 TLN1Q9Y490 2541 aaKnown RBP1.78□□□□□ -2.12
TRPS1-207ENST00000518018 FAM208BQ5VWN6 2430 aa1.78□□□□□ -2.12
TRPS1-207ENST00000518018 SORL1Q92673 2214 aa1.78□□□□□ -2.13
TRPS1-207ENST00000518018 FLNBO75369 2602 aaKnown RBP1.77□□□□□ -2.13
TRPS1-207ENST00000518018 ASPMQ8IZT6 3477 aa1.77□□□□□ -2.13
TRPS1-207ENST00000518018 CELSR3Q9NYQ7 3312 aa1.77□□□□□ -2.13
TRPS1-207ENST00000518018 AKAP6Q13023 2319 aa1.77□□□□□ -2.13
TRPS1-207ENST00000518018 NBEAQ8NFP9 2946 aa1.77□□□□□ -2.13
TRPS1-207ENST00000518018 FRYQ5TBA9 3013 aa1.77□□□□□ -2.13
TRPS1-207ENST00000518018 GCN1Q92616 2671 aaKnown RBP1.76□□□□□ -2.13
TRPS1-207ENST00000518018 ZFHX3Q15911 3703 aa1.76□□□□□ -2.13
TRPS1-207ENST00000518018 SPENQ96T58 3664 aaKnown RBP1.76□□□□□ -2.13
TRPS1-207ENST00000518018 FBN1P35555 2871 aaKnown RBP1.76□□□□□ -2.13
TRPS1-207ENST00000518018 J3QKU1 62 aa1.76□□□□□ -2.13
TRPS1-207ENST00000518018 RPL37P61927 97 aaKnown RBP1.76□□□□□ -2.13
TRPS1-207ENST00000518018 NAV2Q8IVL1 2488 aa1.76□□□□□ -2.13
TRPS1-207ENST00000518018 TEP1Q99973 2627 aaKnown RBP1.75□□□□□ -2.13
TRPS1-207ENST00000518018 PRRC2CQ9Y520 2896 aaKnown RBP1.75□□□□□ -2.13
TRPS1-207ENST00000518018 FRYLO94915 3013 aa1.74□□□□□ -2.13
TRPS1-207ENST00000518018 HRNRQ86YZ3 2850 aaPredicted RBP1.74□□□□□ -2.13
TRPS1-207ENST00000518018 DOPEY1Q5JWR5 2465 aa1.74□□□□□ -2.13
TRPS1-207ENST00000518018 RIF1Q5UIP0 2472 aaKnown RBP1.74□□□□□ -2.13
TRPS1-207ENST00000518018 GVINP1Q7Z2Y8 2422 aa1.74□□□□□ -2.13
TRPS1-207ENST00000518018 H1FX-AS1Q4G0G2 97 aa1.74□□□□□ -2.13
TRPS1-207ENST00000518018 CRIPTQ9P021 101 aa1.74□□□□□ -2.13
TRPS1-207ENST00000518018 USP9XQ93008 2570 aaPredicted RBP1.74□□□□□ -2.13
TRPS1-207ENST00000518018 ZNF462Q96JM2 2506 aa1.74□□□□□ -2.13
TRPS1-207ENST00000518018 ANKRD17O75179 2603 aaKnown RBP1.73□□□□□ -2.13
TRPS1-207ENST00000518018 DSPP15924 2871 aaKnown RBP1.73□□□□□ -2.13
TRPS1-207ENST00000518018 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
TRPS1-207ENST00000518018 COX6B2Q6YFQ2 88 aa1.73□□□□□ -2.13
TRPS1-207ENST00000518018 HIVEP3Q5T1R4 2406 aa1.73□□□□□ -2.13
TRPS1-207ENST00000518018 NBASA2RRP1 2371 aa1.73□□□□□ -2.13
TRPS1-207ENST00000518018 C2CD3Q4AC94 2353 aa1.73□□□□□ -2.13
TRPS1-207ENST00000518018 DMDP11532 3685 aa1.73□□□□□ -2.13
TRPS1-207ENST00000518018 ZFYVE26Q68DK2 2539 aa1.73□□□□□ -2.13
TRPS1-207ENST00000518018 LOC400499M0QZD8 3231 aa1.72□□□□□ -2.13
TRPS1-207ENST00000518018 JMJD1CQ15652 2540 aa1.72□□□□□ -2.13
TRPS1-207ENST00000518018 K7EIL1 84 aa1.72□□□□□ -2.13
TRPS1-207ENST00000518018 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
TRPS1-207ENST00000518018 KRTAP21-3Q3LHN1 58 aa1.72□□□□□ -2.13
TRPS1-207ENST00000518018 ADGRG4Q8IZF6 3080 aa1.71□□□□□ -2.14
TRPS1-207ENST00000518018 TLN2Q9Y4G6 2542 aa1.71□□□□□ -2.14
TRPS1-207ENST00000518018 SMR3AQ99954 134 aa1.71□□□□□ -2.14
TRPS1-207ENST00000518018 MYO9AB2RTY4 2548 aa1.71□□□□□ -2.14
TRPS1-207ENST00000518018 IGF2RP11717 2491 aa1.71□□□□□ -2.14
TRPS1-207ENST00000518018 MAP1AP78559 2803 aaPredicted RBP1.7□□□□□ -2.14
TRPS1-207ENST00000518018 H0YAA0 97 aa1.7□□□□□ -2.14
TRPS1-207ENST00000518018 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
TRPS1-207ENST00000518018 RPS29P62273 56 aaKnown RBP1.7□□□□□ -2.14
TRPS1-207ENST00000518018 CSPG4Q6UVK1 2322 aa1.7□□□□□ -2.14
TRPS1-207ENST00000518018 SMG1Q96Q15 3661 aaKnown RBP1.7□□□□□ -2.14
TRPS1-207ENST00000518018 CEP295Q9C0D2 2601 aa1.7□□□□□ -2.14
TRPS1-207ENST00000518018 APLNQ9ULZ1 77 aa1.7□□□□□ -2.14
TRPS1-207ENST00000518018 DMXL2Q8TDJ6 3036 aa1.7□□□□□ -2.14
TRPS1-207ENST00000518018 KALRNO60229 2985 aa1.7□□□□□ -2.14
TRPS1-207ENST00000518018 FBN3Q75N90 2809 aa1.7□□□□□ -2.14
TRPS1-207ENST00000518018 TENM4Q6N022 2769 aa1.7□□□□□ -2.14
TRPS1-207ENST00000518018 BOD1L1Q8NFC6 3051 aa1.69□□□□□ -2.14
TRPS1-207ENST00000518018 PTPN13Q12923 2485 aa1.69□□□□□ -2.14
TRPS1-207ENST00000518018 SPG11Q96JI7 2443 aa1.69□□□□□ -2.14
TRPS1-207ENST00000518018 CSMD1Q96PZ7 3565 aa1.69□□□□□ -2.14
TRPS1-207ENST00000518018 HELZ2Q9BYK8 2649 aaKnown RBP1.69□□□□□ -2.14
TRPS1-207ENST00000518018 HECTD1Q9ULT8 2610 aa1.69□□□□□ -2.14
TRPS1-207ENST00000518018 AKAP13Q12802 2813 aa1.68□□□□□ -2.14
TRPS1-207ENST00000518018 FBN2P35556 2912 aa1.68□□□□□ -2.14
TRPS1-207ENST00000518018 Q6ZSA8 131 aa1.68□□□□□ -2.14
TRPS1-207ENST00000518018 LRBAP50851 2863 aa1.68□□□□□ -2.14
TRPS1-207ENST00000518018 ABCA12Q86UK0 2595 aa1.67□□□□□ -2.14
TRPS1-207ENST00000518018 MYO18BQ8IUG5 2567 aa1.67□□□□□ -2.14
TRPS1-207ENST00000518018 TACC2O95359 2948 aa1.67□□□□□ -2.14
TRPS1-207ENST00000518018 RELNP78509 3460 aa1.67□□□□□ -2.14
TRPS1-207ENST00000518018 MGAQ8IWI9 3026 aa1.66□□□□□ -2.14
TRPS1-207ENST00000518018 BSNQ9UPA5 3926 aa1.66□□□□□ -2.14
TRPS1-207ENST00000518018 IGSF10Q6WRI0 2623 aa1.65□□□□□ -2.15
TRPS1-207ENST00000518018 TEX15Q9BXT5 2789 aa1.65□□□□□ -2.15
TRPS1-207ENST00000518018 CELSR1Q9NYQ6 3014 aa1.65□□□□□ -2.15
TRPS1-207ENST00000518018 ITPR1Q14643 2758 aa1.64□□□□□ -2.15
TRPS1-207ENST00000518018 UBR5O95071 2799 aaPredicted RBP1.64□□□□□ -2.15
TRPS1-207ENST00000518018 A0A0D9SG42 100 aa1.64□□□□□ -2.15
TRPS1-207ENST00000518018 LRRK2Q5S007 2527 aa1.64□□□□□ -2.15
TRPS1-207ENST00000518018 UTP20O75691 2785 aaKnown RBP1.64□□□□□ -2.15
TRPS1-207ENST00000518018 ITPR3Q14573 2671 aa1.63□□□□□ -2.15
TRPS1-207ENST00000518018 DCHS2Q6V1P9 2916 aa1.63□□□□□ -2.15
TRPS1-207ENST00000518018 SVEP1Q4LDE5 3571 aa1.63□□□□□ -2.15
TRPS1-207ENST00000518018 S4R3F8 94 aa1.63□□□□□ -2.15
TRPS1-207ENST00000518018 ATMQ13315 3056 aa1.63□□□□□ -2.15
TRPS1-207ENST00000518018 COL12A1Q99715 3063 aa1.63□□□□□ -2.15
TRPS1-207ENST00000518018 USP9YO00507 2555 aaPredicted RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms