RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 HIST1H1DP16402 221 aaKnown RBP1.02□□□□□ -2.25
CPNE3-204ENST00000517862 KCNRGQ8N5I3 272 aa1.02□□□□□ -2.25
CPNE3-204ENST00000517862 TRGV9Q99603 122 aa1.02□□□□□ -2.25
CPNE3-204ENST00000517862 NCR3O14931 201 aa1.01□□□□□ -2.25
CPNE3-204ENST00000517862 KRTAP19-7Q3SYF9 63 aa1.01□□□□□ -2.25
CPNE3-204ENST00000517862 LINC01545Q5VT33 79 aa1.01□□□□□ -2.25
CPNE3-204ENST00000517862 ZNF818PQ6ZRF7 136 aa1.01□□□□□ -2.25
CPNE3-204ENST00000517862 ATOH7Q8N100 152 aa1.01□□□□□ -2.25
CPNE3-204ENST00000517862 SEC11CQ9BY50 192 aa1.01□□□□□ -2.25
CPNE3-204ENST00000517862 TMEM191AQ9H0A3 160 aa1.01□□□□□ -2.25
CPNE3-204ENST00000517862 NDUFA1O15239 70 aa1□□□□□ -2.25
CPNE3-204ENST00000517862 DLEU1O43261 78 aa1□□□□□ -2.25
CPNE3-204ENST00000517862 CCKP06307 115 aa1□□□□□ -2.25
CPNE3-204ENST00000517862 SPAG11BQ08648 103 aa1□□□□□ -2.25
CPNE3-204ENST00000517862 MEIG1Q5JSS6 88 aa1□□□□□ -2.25
CPNE3-204ENST00000517862 ATG5Q9H1Y0 275 aa1□□□□□ -2.25
CPNE3-204ENST00000517862 TMEM242Q9NWH2 141 aa1□□□□□ -2.25
CPNE3-204ENST00000517862 SCN3BQ9NY72 215 aa1□□□□□ -2.25
CPNE3-204ENST00000517862 C6orf48Q9UBA6 75 aa1□□□□□ -2.25
CPNE3-204ENST00000517862 IL5P05113 134 aa0.99□□□□□ -2.25
CPNE3-204ENST00000517862 S100A7L2Q5SY68 101 aa0.99□□□□□ -2.25
CPNE3-204ENST00000517862 C9orf153Q5TBE3 101 aa0.99□□□□□ -2.25
CPNE3-204ENST00000517862 LINC00959A0A1B0GUT2 108 aa0.98□□□□□ -2.25
CPNE3-204ENST00000517862 H3BQ15 152 aa0.98□□□□□ -2.25
CPNE3-204ENST00000517862 CCDC179H3BU77 68 aa0.98□□□□□ -2.25
CPNE3-204ENST00000517862 FXYD1O00168 92 aa0.98□□□□□ -2.25
CPNE3-204ENST00000517862 SNCGO76070 127 aa0.98□□□□□ -2.25
CPNE3-204ENST00000517862 UBE2G1P62253 170 aa0.98□□□□□ -2.25
CPNE3-204ENST00000517862 PPDPFLQ8WWR9 84 aa0.98□□□□□ -2.25
CPNE3-204ENST00000517862 IFI27L1Q96BM0 104 aa0.98□□□□□ -2.25
CPNE3-204ENST00000517862 DMAC1Q96GE9 116 aa0.98□□□□□ -2.25
CPNE3-204ENST00000517862 LINC00208Q96KT6 92 aa0.98□□□□□ -2.25
CPNE3-204ENST00000517862 TRAV21A0A0B4J279 112 aa0.97□□□□□ -2.25
CPNE3-204ENST00000517862 HIGD1CA8MV81 97 aa0.97□□□□□ -2.25
CPNE3-204ENST00000517862 IGLC2P0DOY2 106 aa0.97□□□□□ -2.25
CPNE3-204ENST00000517862 CEBPZOSA8MTT3 80 aa0.96□□□□□ -2.26
CPNE3-204ENST00000517862 NPC2P61916 151 aa0.96□□□□□ -2.26
CPNE3-204ENST00000517862 ZNF56Q15929 161 aa0.96□□□□□ -2.26
CPNE3-204ENST00000517862 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
CPNE3-204ENST00000517862 NMSQ5H8A3 153 aa0.96□□□□□ -2.26
CPNE3-204ENST00000517862 Q6ZQY7 126 aa0.96□□□□□ -2.26
CPNE3-204ENST00000517862 Q96NJ1 140 aa0.96□□□□□ -2.26
CPNE3-204ENST00000517862 C2orf88Q9BSF0 95 aa0.96□□□□□ -2.26
CPNE3-204ENST00000517862 AKAIN1P0CW23 69 aa0.95□□□□□ -2.26
CPNE3-204ENST00000517862 SPANXN1Q5VSR9 72 aa0.95□□□□□ -2.26
CPNE3-204ENST00000517862 RPL7L1Q6DKI1 246 aaKnown RBP0.95□□□□□ -2.26
CPNE3-204ENST00000517862 XAF1Q6GPH4 301 aa0.95□□□□□ -2.26
CPNE3-204ENST00000517862 SPTSSBQ8NFR3 76 aa0.95□□□□□ -2.26
CPNE3-204ENST00000517862 PLAC4Q8WY50 150 aa0.95□□□□□ -2.26
CPNE3-204ENST00000517862 TMEM141Q96I45 108 aa0.95□□□□□ -2.26
CPNE3-204ENST00000517862 A0A0G2JND7 137 aa0.94□□□□□ -2.26
CPNE3-204ENST00000517862 TRBV30A0A0K0K1B3 111 aa0.94□□□□□ -2.26
CPNE3-204ENST00000517862 TCRBV3S1A0A5B6 114 aa0.94□□□□□ -2.26
CPNE3-204ENST00000517862 NDUFB6O95139 128 aa0.94□□□□□ -2.26
CPNE3-204ENST00000517862 C5orf38Q86SI9 138 aa0.94□□□□□ -2.26
CPNE3-204ENST00000517862 A0A1W2PPM0 123 aa0.93□□□□□ -2.26
CPNE3-204ENST00000517862 F6UZH7 168 aa0.93□□□□□ -2.26
CPNE3-204ENST00000517862 S100A1P23297 94 aa0.93□□□□□ -2.26
CPNE3-204ENST00000517862 ACBD7Q8N6N7 88 aa0.93□□□□□ -2.26
CPNE3-204ENST00000517862 KLKP1Q107X0 134 aa0.92□□□□□ -2.26
CPNE3-204ENST00000517862 CYP2G1PQ6ZSU1 146 aa0.92□□□□□ -2.26
CPNE3-204ENST00000517862 LENEPQ9Y5L5 61 aa0.92□□□□□ -2.26
CPNE3-204ENST00000517862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.91□□□□□ -2.26
CPNE3-204ENST00000517862 FGF7P21781 194 aa0.91□□□□□ -2.26
CPNE3-204ENST00000517862 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
CPNE3-204ENST00000517862 C20orf197Q8N268 126 aa0.91□□□□□ -2.26
CPNE3-204ENST00000517862 SERP1Q9Y6X1 66 aa0.91□□□□□ -2.26
CPNE3-204ENST00000517862 LINC00575Q6W349 94 aa0.9□□□□□ -2.27
CPNE3-204ENST00000517862 COPS9Q8WXC6 57 aa0.9□□□□□ -2.27
CPNE3-204ENST00000517862 H3BVH4 76 aa0.89□□□□□ -2.27
CPNE3-204ENST00000517862 ELOF1P60002 83 aaKnown RBP0.89□□□□□ -2.27
CPNE3-204ENST00000517862 Q8N8P6 123 aa0.89□□□□□ -2.27
CPNE3-204ENST00000517862 ARL2-SNX15V9GYD0 113 aa0.89□□□□□ -2.27
CPNE3-204ENST00000517862 TEX49A0A1B0GTD5 131 aa0.88□□□□□ -2.27
CPNE3-204ENST00000517862 MRPL54Q6P161 138 aaKnown RBP0.88□□□□□ -2.27
CPNE3-204ENST00000517862 DSCR8Q96T75 97 aa0.88□□□□□ -2.27
CPNE3-204ENST00000517862 C10orf95Q9H7T3 257 aa0.88□□□□□ -2.27
CPNE3-204ENST00000517862 HCG22E2RYF7 251 aa0.87□□□□□ -2.27
CPNE3-204ENST00000517862 ARMS2P0C7Q2 107 aa0.87□□□□□ -2.27
CPNE3-204ENST00000517862 H1FX-AS1Q4G0G2 97 aa0.87□□□□□ -2.27
CPNE3-204ENST00000517862 C10orf113Q5VZT2 155 aa0.87□□□□□ -2.27
CPNE3-204ENST00000517862 C12orf73Q69YU5 71 aa0.87□□□□□ -2.27
CPNE3-204ENST00000517862 COX7B2Q8TF08 81 aa0.87□□□□□ -2.27
CPNE3-204ENST00000517862 MT1LQ93083 61 aa0.87□□□□□ -2.27
CPNE3-204ENST00000517862 S100PP25815 95 aa0.86□□□□□ -2.27
CPNE3-204ENST00000517862 GNG2P59768 71 aa0.86□□□□□ -2.27
CPNE3-204ENST00000517862 SSBP1Q04837 148 aaKnown RBP0.86□□□□□ -2.27
CPNE3-204ENST00000517862 WHAMMP3Q1A5X7 153 aa0.86□□□□□ -2.27
CPNE3-204ENST00000517862 WFDC13Q8IUB5 93 aa0.86□□□□□ -2.27
CPNE3-204ENST00000517862 NMES1Q9C002 83 aa0.86□□□□□ -2.27
CPNE3-204ENST00000517862 CRIPTQ9P021 101 aa0.86□□□□□ -2.27
CPNE3-204ENST00000517862 TRBV10-3A0A0K0K1G6 114 aa0.85□□□□□ -2.27
CPNE3-204ENST00000517862 GNG4P50150 75 aa0.85□□□□□ -2.27
CPNE3-204ENST00000517862 MRPS10P82664 201 aaKnown RBP0.85□□□□□ -2.27
CPNE3-204ENST00000517862 C12orf57Q99622 126 aa0.85□□□□□ -2.27
CPNE3-204ENST00000517862 FXYD6Q9H0Q3 95 aa0.85□□□□□ -2.27
CPNE3-204ENST00000517862 TRAV13-2A0A0B4J235 113 aa0.84□□□□□ -2.27
CPNE3-204ENST00000517862 CDC42SE2Q9NRR3 84 aa0.84□□□□□ -2.27
CPNE3-204ENST00000517862 CACFD1Q9UGQ2 172 aa0.84□□□□□ -2.27
CPNE3-204ENST00000517862 V9GYV3 84 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms