RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ITPR3Q14573 2671 aa1.86□□□□□ -2.11
CTNNA1-202ENST00000517533 FASNP49327 2511 aaKnown RBP1.86□□□□□ -2.11
CTNNA1-202ENST00000517533 TNCP24821 2201 aa1.85□□□□□ -2.11
CTNNA1-202ENST00000517533 CREBBPQ92793 2442 aa1.85□□□□□ -2.11
CTNNA1-202ENST00000517533 NDUFA4O00483 81 aa1.85□□□□□ -2.11
CTNNA1-202ENST00000517533 ARL14EPLP0DKL9 152 aa1.85□□□□□ -2.11
CTNNA1-202ENST00000517533 C10orf95Q9H7T3 257 aa1.85□□□□□ -2.11
CTNNA1-202ENST00000517533 CCDC168Q8NDH2 2452 aa1.85□□□□□ -2.11
CTNNA1-202ENST00000517533 NAV3Q8IVL0 2385 aa1.85□□□□□ -2.11
CTNNA1-202ENST00000517533 MXRA5Q9NR99 2828 aa1.85□□□□□ -2.11
CTNNA1-202ENST00000517533 ZANQ9Y493 2812 aa1.85□□□□□ -2.11
CTNNA1-202ENST00000517533 VPS13CQ709C8 3753 aa1.84□□□□□ -2.11
CTNNA1-202ENST00000517533 FLNAP21333 2647 aaKnown RBP1.84□□□□□ -2.11
CTNNA1-202ENST00000517533 LINC01549A6NIU2 74 aa1.84□□□□□ -2.11
CTNNA1-202ENST00000517533 KRTAP21-3Q3LHN1 58 aa1.84□□□□□ -2.11
CTNNA1-202ENST00000517533 CSPG4Q6UVK1 2322 aa1.84□□□□□ -2.12
CTNNA1-202ENST00000517533 ABCA2Q9BZC7 2435 aa1.83□□□□□ -2.12
CTNNA1-202ENST00000517533 CSMD2Q7Z408 3487 aa1.83□□□□□ -2.12
CTNNA1-202ENST00000517533 CELSR1Q9NYQ6 3014 aa1.83□□□□□ -2.12
CTNNA1-202ENST00000517533 A0A0D9SG42 100 aa1.83□□□□□ -2.12
CTNNA1-202ENST00000517533 LINC00959A0A1B0GUT2 108 aa1.83□□□□□ -2.12
CTNNA1-202ENST00000517533 SMR3AQ99954 134 aa1.83□□□□□ -2.12
CTNNA1-202ENST00000517533 RHPN1-AS1Q9BWJ2 59 aa1.83□□□□□ -2.12
CTNNA1-202ENST00000517533 FLNBO75369 2602 aaKnown RBP1.83□□□□□ -2.12
CTNNA1-202ENST00000517533 MYO9AB2RTY4 2548 aa1.82□□□□□ -2.12
CTNNA1-202ENST00000517533 OTOGQ6ZRI0 2925 aa1.82□□□□□ -2.12
CTNNA1-202ENST00000517533 SVEP1Q4LDE5 3571 aa1.82□□□□□ -2.12
CTNNA1-202ENST00000517533 TLN2Q9Y4G6 2542 aa1.82□□□□□ -2.12
CTNNA1-202ENST00000517533 ACANP16112 2415 aa1.81□□□□□ -2.12
CTNNA1-202ENST00000517533 CSMD1Q96PZ7 3565 aa1.81□□□□□ -2.12
CTNNA1-202ENST00000517533 NF1P21359 2839 aa1.81□□□□□ -2.12
CTNNA1-202ENST00000517533 JMJD1CQ15652 2540 aa1.81□□□□□ -2.12
CTNNA1-202ENST00000517533 NBPF19A0A087WUL8 3843 aa1.81□□□□□ -2.12
CTNNA1-202ENST00000517533 SONP18583 2426 aaKnown RBP1.8□□□□□ -2.12
CTNNA1-202ENST00000517533 HIVEP1P15822 2718 aa1.8□□□□□ -2.12
CTNNA1-202ENST00000517533 NIPBLQ6KC79 2804 aaeCLIP1.8□□□□□ -2.122e-7■■■■□ 20.4
CTNNA1-202ENST00000517533 DEFB136Q30KP8 78 aa1.8□□□□□ -2.12
CTNNA1-202ENST00000517533 DEFB114Q30KQ6 69 aa1.8□□□□□ -2.12
CTNNA1-202ENST00000517533 ATP5EP2Q5VTU8 51 aa1.8□□□□□ -2.12
CTNNA1-202ENST00000517533 SETXQ7Z333 2677 aaKnown RBP1.8□□□□□ -2.12
CTNNA1-202ENST00000517533 MTORP42345 2549 aa1.79□□□□□ -2.12
CTNNA1-202ENST00000517533 TRAV21A0A0B4J279 112 aa1.79□□□□□ -2.12
CTNNA1-202ENST00000517533 SMIM27A0A1W2PRY6 76 aa1.79□□□□□ -2.12
CTNNA1-202ENST00000517533 K7EMI3 77 aa1.79□□□□□ -2.12
CTNNA1-202ENST00000517533 NSD1Q96L73 2696 aaPredicted RBP1.79□□□□□ -2.12
CTNNA1-202ENST00000517533 AKAP9Q99996 3911 aa1.79□□□□□ -2.12
CTNNA1-202ENST00000517533 ZNF469Q96JG9 3925 aaPredicted RBP1.78□□□□□ -2.12
CTNNA1-202ENST00000517533 SPINK4O60575 86 aa1.78□□□□□ -2.12
CTNNA1-202ENST00000517533 CRIP1P50238 77 aa1.78□□□□□ -2.12
CTNNA1-202ENST00000517533 DEFB131AP59861 70 aa1.78□□□□□ -2.12
CTNNA1-202ENST00000517533 SETD2Q9BYW2 2564 aaPredicted RBP1.78□□□□□ -2.12
CTNNA1-202ENST00000517533 PLNP26678 52 aa1.77□□□□□ -2.13
CTNNA1-202ENST00000517533 IFI27P40305 119 aaPredicted RBP1.77□□□□□ -2.13
CTNNA1-202ENST00000517533 WFDC9Q8NEX5 89 aa1.77□□□□□ -2.13
CTNNA1-202ENST00000517533 F8P00451 2351 aa1.77□□□□□ -2.13
CTNNA1-202ENST00000517533 HTN1P15515 57 aa1.76□□□□□ -2.13
CTNNA1-202ENST00000517533 DEFB1P60022 68 aa1.76□□□□□ -2.13
CTNNA1-202ENST00000517533 TIMM8BQ9Y5J9 83 aaPredicted RBP1.76□□□□□ -2.13
CTNNA1-202ENST00000517533 TEP1Q99973 2627 aaKnown RBP1.76□□□□□ -2.13
CTNNA1-202ENST00000517533 ANK3Q12955 4377 aaKnown RBP1.75□□□□□ -2.13
CTNNA1-202ENST00000517533 C2CD3Q4AC94 2353 aa1.75□□□□□ -2.13
CTNNA1-202ENST00000517533 A8MTW9 85 aa1.75□□□□□ -2.13
CTNNA1-202ENST00000517533 H3BVH4 76 aa1.75□□□□□ -2.13
CTNNA1-202ENST00000517533 C3orf79P0CE67 100 aa1.75□□□□□ -2.13
CTNNA1-202ENST00000517533 COX8AP10176 69 aa1.75□□□□□ -2.13
CTNNA1-202ENST00000517533 CNFNQ9BYD5 112 aa1.75□□□□□ -2.13
CTNNA1-202ENST00000517533 MAST4O15021 2626 aa1.75□□□□□ -2.13
CTNNA1-202ENST00000517533 ATRQ13535 2644 aa1.75□□□□□ -2.13
CTNNA1-202ENST00000517533 TENM1Q9UKZ4 2725 aa1.75□□□□□ -2.13
CTNNA1-202ENST00000517533 WNK1Q9H4A3 2382 aa1.74□□□□□ -2.13
CTNNA1-202ENST00000517533 CUBNO60494 3623 aa1.73□□□□□ -2.13
CTNNA1-202ENST00000517533 FCER1GP30273 86 aa1.73□□□□□ -2.13
CTNNA1-202ENST00000517533 TP53AIP1Q9HCN2 124 aa1.73□□□□□ -2.13
CTNNA1-202ENST00000517533 COL6A5A8TX70 2615 aa1.72□□□□□ -2.13
CTNNA1-202ENST00000517533 NOP10Q9NPE3 64 aaKnown RBP1.72□□□□□ -2.13
CTNNA1-202ENST00000517533 VWFP04275 2813 aa1.72□□□□□ -2.13
CTNNA1-202ENST00000517533 STAB1Q9NY15 2570 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 LINC01546A6NGU7 62 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 I3L3M4 83 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 M0QY20 66 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 SPART-AS1P0CW21 52 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 DEFB130BP0DP73 79 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 DEFB130AP0DP74 79 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 POLR2KP53803 58 aaKnown RBP1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 ATXN8Q156A1 80 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 DEFB135Q30KP9 77 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 RPL39LQ96EH5 51 aaKnown RBP1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 SMIM2Q9BVW6 85 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 PKD1L1Q8TDX9 2849 aa1.71□□□□□ -2.14
CTNNA1-202ENST00000517533 PRO0255Q9UI72 69 aa1.7□□□□□ -2.14
CTNNA1-202ENST00000517533 NBEAL2Q6ZNJ1 2754 aa1.7□□□□□ -2.14
CTNNA1-202ENST00000517533 DEFB4AO15263 64 aa1.69□□□□□ -2.14
CTNNA1-202ENST00000517533 NDUFB1O75438 58 aa1.69□□□□□ -2.14
CTNNA1-202ENST00000517533 H0YGX0 51 aa1.68□□□□□ -2.14
CTNNA1-202ENST00000517533 H3BNG1 76 aa1.68□□□□□ -2.14
CTNNA1-202ENST00000517533 HTN3P15516 51 aa1.68□□□□□ -2.14
CTNNA1-202ENST00000517533 COX7BP24311 80 aa1.68□□□□□ -2.14
CTNNA1-202ENST00000517533 RPL39P62891 51 aaKnown RBP1.68□□□□□ -2.14
CTNNA1-202ENST00000517533 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
CTNNA1-202ENST00000517533 DEFB104AQ8WTQ1 72 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms