RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 HSPG2P98160 4391 aa2□□□□□ -2.09
CPNE3-201ENST00000517354 VPS13DQ5THJ4 4388 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 A0A087WVE0 104 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 H3BSH0 61 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 GCHFRP30047 84 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 FXYD4P59646 89 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 PRB3Q04118 309 aaPredicted RBP1.99□□□□□ -2.09
CPNE3-201ENST00000517354 FAM74A4Q5TZK3 123 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 Q6JHZ5 121 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 C6orf201Q7Z4U5 140 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 LINC00208Q96KT6 92 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 AMELXQ99217 191 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 R4GMQ9 66 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 V9GYV3 84 aa1.99□□□□□ -2.09
CPNE3-201ENST00000517354 DYNC1H1Q14204 4646 aaKnown RBP1.98□□□□□ -2.09
CPNE3-201ENST00000517354 DNAH6Q9C0G6 4158 aa1.98□□□□□ -2.09
CPNE3-201ENST00000517354 PKD1P98161 4303 aa1.98□□□□□ -2.09
CPNE3-201ENST00000517354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.98□□□□□ -2.09
CPNE3-201ENST00000517354 M0R135 149 aa1.98□□□□□ -2.09
CPNE3-201ENST00000517354 FXYD1O00168 92 aa1.98□□□□□ -2.09
CPNE3-201ENST00000517354 RPL38P63173 70 aaKnown RBP1.98□□□□□ -2.09
CPNE3-201ENST00000517354 DEFB136Q30KP8 78 aa1.98□□□□□ -2.09
CPNE3-201ENST00000517354 LINC01558Q9Y6Z2 57 aa1.98□□□□□ -2.09
CPNE3-201ENST00000517354 FAT2Q9NYQ8 4349 aa1.97□□□□□ -2.09
CPNE3-201ENST00000517354 A0A087WXM4 84 aa1.97□□□□□ -2.09
CPNE3-201ENST00000517354 D6R8Y8 96 aa1.97□□□□□ -2.09
CPNE3-201ENST00000517354 COX8AP10176 69 aa1.97□□□□□ -2.09
CPNE3-201ENST00000517354 MUSTN1Q8IVN3 82 aa1.97□□□□□ -2.09
CPNE3-201ENST00000517354 GAFA1Q96PS6 74 aa1.97□□□□□ -2.09
CPNE3-201ENST00000517354 WFDC6Q9BQY6 131 aa1.97□□□□□ -2.09
CPNE3-201ENST00000517354 DNAH17Q9UFH2 4485 aa1.96□□□□□ -2.1
CPNE3-201ENST00000517354 CTXND1A0A1B0GTU2 59 aa1.96□□□□□ -2.1
CPNE3-201ENST00000517354 BAGE2Q86Y30 109 aa1.96□□□□□ -2.1
CPNE3-201ENST00000517354 Q96NJ1 140 aa1.96□□□□□ -2.1
CPNE3-201ENST00000517354 UBE2D4Q9Y2X8 147 aa1.96□□□□□ -2.1
CPNE3-201ENST00000517354 DNAH11Q96DT5 4516 aa1.96□□□□□ -2.1
CPNE3-201ENST00000517354 DNAH2Q9P225 4427 aa1.96□□□□□ -2.1
CPNE3-201ENST00000517354 C3orf79P0CE67 100 aa1.95□□□□□ -2.1
CPNE3-201ENST00000517354 S100A3P33764 101 aa1.95□□□□□ -2.1
CPNE3-201ENST00000517354 ZNF137PP52743 207 aa1.95□□□□□ -2.1
CPNE3-201ENST00000517354 LINC00575Q6W349 94 aa1.95□□□□□ -2.1
CPNE3-201ENST00000517354 APLNQ9ULZ1 77 aa1.95□□□□□ -2.1
CPNE3-201ENST00000517354 FLG2Q5D862 2391 aaPredicted RBP1.94□□□□□ -2.1
CPNE3-201ENST00000517354 TRAV1-2A0A0B4J238 106 aa1.94□□□□□ -2.1
CPNE3-201ENST00000517354 UQCR11O14957 56 aa1.94□□□□□ -2.1
CPNE3-201ENST00000517354 Q6ZQY7 126 aa1.94□□□□□ -2.1
CPNE3-201ENST00000517354 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
CPNE3-201ENST00000517354 TRGV1A0A0A0MS02 117 aa1.93□□□□□ -2.1
CPNE3-201ENST00000517354 H3BVH4 76 aa1.93□□□□□ -2.1
CPNE3-201ENST00000517354 BAGE3Q86Y29 109 aa1.93□□□□□ -2.1
CPNE3-201ENST00000517354 DEFB107AQ8IZN7 70 aa1.93□□□□□ -2.1
CPNE3-201ENST00000517354 PLAC8Q9NZF1 115 aa1.93□□□□□ -2.1
CPNE3-201ENST00000517354 RNF213Q63HN8 5207 aa1.93□□□□□ -2.1
CPNE3-201ENST00000517354 TRBV7-4A0A0J9YYF1 115 aa1.92□□□□□ -2.1
CPNE3-201ENST00000517354 CPSF4LA6NMK7 179 aaKnown RBP1.92□□□□□ -2.1
CPNE3-201ENST00000517354 MGPP08493 103 aa1.92□□□□□ -2.1
CPNE3-201ENST00000517354 IFI27P40305 119 aaPredicted RBP1.92□□□□□ -2.1
CPNE3-201ENST00000517354 ATP5EP2Q5VTU8 51 aa1.92□□□□□ -2.1
CPNE3-201ENST00000517354 SPRR4Q96PI1 79 aa1.92□□□□□ -2.1
CPNE3-201ENST00000517354 HMCN2Q8NDA2 5059 aa1.92□□□□□ -2.1
CPNE3-201ENST00000517354 MYCBP2O75592 4640 aa1.92□□□□□ -2.1
CPNE3-201ENST00000517354 APOBP04114 4563 aaKnown RBP1.91□□□□□ -2.1
CPNE3-201ENST00000517354 FXYD6-FXYD2A0A087WZ82 144 aa1.91□□□□□ -2.1
CPNE3-201ENST00000517354 SPINK7P58062 85 aa1.91□□□□□ -2.1
CPNE3-201ENST00000517354 Q5VSD8 79 aa1.91□□□□□ -2.1
CPNE3-201ENST00000517354 LINC00472Q9H8W2 130 aa1.9□□□□□ -2.11
CPNE3-201ENST00000517354 VPS13BQ7Z7G8 4022 aa1.89□□□□□ -2.11
CPNE3-201ENST00000517354 G3V318 75 aa1.89□□□□□ -2.11
CPNE3-201ENST00000517354 DEFB135Q30KP9 77 aa1.89□□□□□ -2.11
CPNE3-201ENST00000517354 DEFB114Q30KQ6 69 aa1.89□□□□□ -2.11
CPNE3-201ENST00000517354 LINC00846Q9NV44 126 aa1.89□□□□□ -2.11
CPNE3-201ENST00000517354 GNG13Q9P2W3 67 aa1.89□□□□□ -2.11
CPNE3-201ENST00000517354 LRP1BQ9NZR2 4599 aa1.89□□□□□ -2.11
CPNE3-201ENST00000517354 TRBV30A0A0K0K1B3 111 aa1.88□□□□□ -2.11
CPNE3-201ENST00000517354 H0Y9P7 68 aa1.88□□□□□ -2.11
CPNE3-201ENST00000517354 H3BUA1 57 aa1.88□□□□□ -2.11
CPNE3-201ENST00000517354 ACYP2P14621 99 aa1.88□□□□□ -2.11
CPNE3-201ENST00000517354 UBE2DNLQ8IWF7 75 aa1.88□□□□□ -2.11
CPNE3-201ENST00000517354 DEFB104AQ8WTQ1 72 aa1.88□□□□□ -2.11
CPNE3-201ENST00000517354 USMG5Q96IX5 58 aa1.88□□□□□ -2.11
CPNE3-201ENST00000517354 DEFB131BA0A096LNP1 70 aa1.87□□□□□ -2.11
CPNE3-201ENST00000517354 DNAH5Q8TE73 4624 aa1.86□□□□□ -2.11
CPNE3-201ENST00000517354 A0A1B0GUT8 65 aa1.86□□□□□ -2.11
CPNE3-201ENST00000517354 COX17Q14061 63 aa1.86□□□□□ -2.11
CPNE3-201ENST00000517354 SPATA8Q6RVD6 105 aa1.86□□□□□ -2.11
CPNE3-201ENST00000517354 FAM103A1Q9BTL3 118 aaKnown RBP1.86□□□□□ -2.11
CPNE3-201ENST00000517354 NDUFA3O95167 84 aa1.85□□□□□ -2.11
CPNE3-201ENST00000517354 SMR3BP02814 79 aaPredicted RBP1.85□□□□□ -2.11
CPNE3-201ENST00000517354 RPS27P42677 84 aaKnown RBP1.85□□□□□ -2.11
CPNE3-201ENST00000517354 FXYD6P3P58550 94 aa1.85□□□□□ -2.11
CPNE3-201ENST00000517354 ATXN8Q156A1 80 aa1.85□□□□□ -2.11
CPNE3-201ENST00000517354 C10orf113Q5VZT2 155 aa1.85□□□□□ -2.11
CPNE3-201ENST00000517354 SMIM4Q8WVI0 70 aa1.85□□□□□ -2.11
CPNE3-201ENST00000517354 LEAP2Q969E1 77 aa1.85□□□□□ -2.11
CPNE3-201ENST00000517354 FAT1Q14517 4588 aa1.85□□□□□ -2.11
CPNE3-201ENST00000517354 DEFB4AO15263 64 aa1.84□□□□□ -2.11
CPNE3-201ENST00000517354 KRTAP10-4P60372 401 aaPredicted RBP1.84□□□□□ -2.11
CPNE3-201ENST00000517354 TMEM263Q8WUH6 116 aaKnown RBP1.84□□□□□ -2.11
CPNE3-201ENST00000517354 TRAV21A0A0B4J279 112 aa1.83□□□□□ -2.12
CPNE3-201ENST00000517354 SPART-AS1P0CW21 52 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms