RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ST20Q9HBF5 79 aa1.23□□□□□ -2.21
HERC4-215ENST00000515753 MANBALQ9NQG1 85 aa1.23□□□□□ -2.21
HERC4-215ENST00000515753 MRPL35Q9NZE8 188 aaKnown RBP1.23□□□□□ -2.21
HERC4-215ENST00000515753 A0A096LNI7 61 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 KANTRA0A1W2PQU2 76 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 C7orf77A4D0Y5 90 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 NDUFA1O15239 70 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 S100A8P05109 93 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 S100PP25815 95 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 FCER1GP30273 86 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 GNG4P50150 75 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 C9orf116Q5BN46 136 aaPredicted RBP1.22□□□□□ -2.21
HERC4-215ENST00000515753 MEIG1Q5JSS6 88 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 RPL7L1Q6DKI1 246 aaKnown RBP1.22□□□□□ -2.21
HERC4-215ENST00000515753 CNFNQ9BYD5 112 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 CDC42SE2Q9NRR3 84 aa1.22□□□□□ -2.21
HERC4-215ENST00000515753 UBR4Q5T4S7 5183 aa1.21□□□□□ -2.21
HERC4-215ENST00000515753 FXYD6-FXYD2A0A087WZ82 144 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 TRBV30A0A0K0K1B3 111 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 DNAL4O96015 105 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 PDE6GP18545 87 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 SEC11AP67812 179 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 SPAG11BQ08648 103 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 SPATA45Q537H7 98 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 OCIAD2Q56VL3 154 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 SPAG11AQ6PDA7 123 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 FAM213BQ8TBF2 198 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 DMAC1Q96GE9 116 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 C20orf78Q9BR46 151 aa1.21□□□□□ -2.22
HERC4-215ENST00000515753 DNAH8Q96JB1 4490 aa1.2□□□□□ -2.22
HERC4-215ENST00000515753 VPS13BQ7Z7G8 4022 aa1.2□□□□□ -2.22
HERC4-215ENST00000515753 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.2□□□□□ -2.22
HERC4-215ENST00000515753 A0A1B0GUT8 65 aa1.2□□□□□ -2.22
HERC4-215ENST00000515753 IGKV2-29A2NJV5 120 aaPredicted RBP1.2□□□□□ -2.22
HERC4-215ENST00000515753 LINC01549A6NIU2 74 aa1.2□□□□□ -2.22
HERC4-215ENST00000515753 K7EMI3 77 aa1.2□□□□□ -2.22
HERC4-215ENST00000515753 IFI27P40305 119 aaPredicted RBP1.2□□□□□ -2.22
HERC4-215ENST00000515753 POLR2KP53803 58 aaKnown RBP1.2□□□□□ -2.22
HERC4-215ENST00000515753 CSAG1Q6PB30 78 aa1.2□□□□□ -2.22
HERC4-215ENST00000515753 SPANXDQ9BXN6 97 aa1.2□□□□□ -2.22
HERC4-215ENST00000515753 GNG13Q9P2W3 67 aa1.2□□□□□ -2.22
HERC4-215ENST00000515753 C22orf24Q9Y442 160 aa1.2□□□□□ -2.22
HERC4-215ENST00000515753 FLG2Q5D862 2391 aaPredicted RBP1.19□□□□□ -2.22
HERC4-215ENST00000515753 BCE1O60756 84 aa1.19□□□□□ -2.22
HERC4-215ENST00000515753 SFTA2Q6UW10 78 aa1.19□□□□□ -2.22
HERC4-215ENST00000515753 C5orf38Q86SI9 138 aa1.19□□□□□ -2.22
HERC4-215ENST00000515753 RPL39LQ96EH5 51 aaKnown RBP1.19□□□□□ -2.22
HERC4-215ENST00000515753 TMEM242Q9NWH2 141 aa1.19□□□□□ -2.22
HERC4-215ENST00000515753 NDUFA12Q9UI09 145 aa1.19□□□□□ -2.22
HERC4-215ENST00000515753 UBE2D4Q9Y2X8 147 aa1.19□□□□□ -2.22
HERC4-215ENST00000515753 TRAV23DV6A0A075B6W5 121 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 HIGD1CA8MV81 97 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 F8VRH5 84 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 SPINK1P00995 79 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 Q5BKY6 102 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 Q8IZM0 81 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 OBSCN-AS1Q96MR7 158 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 LIMD2Q9BT23 127 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 SEC11CQ9BY50 192 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 C6orf48Q9UBA6 75 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 SERP1Q9Y6X1 66 aa1.18□□□□□ -2.22
HERC4-215ENST00000515753 FAT3Q8TDW7 4589 aa1.17□□□□□ -2.22
HERC4-215ENST00000515753 IGKCP01834 107 aa1.17□□□□□ -2.22
HERC4-215ENST00000515753 RPS29P62273 56 aaKnown RBP1.17□□□□□ -2.22
HERC4-215ENST00000515753 TMEM141Q96I45 108 aa1.17□□□□□ -2.22
HERC4-215ENST00000515753 SRRM2Q9UQ35 2752 aaKnown RBP1.17□□□□□ -2.22
HERC4-215ENST00000515753 LRP1Q07954 4544 aaKnown RBP1.17□□□□□ -2.22
HERC4-215ENST00000515753 SNCGO76070 127 aa1.16□□□□□ -2.22
HERC4-215ENST00000515753 COX17Q14061 63 aa1.16□□□□□ -2.22
HERC4-215ENST00000515753 ALKAL2Q6UX46 152 aa1.16□□□□□ -2.22
HERC4-215ENST00000515753 SSBP3-AS1Q7Z2R9 100 aa1.16□□□□□ -2.22
HERC4-215ENST00000515753 C12orf57Q99622 126 aa1.16□□□□□ -2.22
HERC4-215ENST00000515753 SMIM2Q9BVW6 85 aa1.16□□□□□ -2.22
HERC4-215ENST00000515753 NXT2Q9NPJ8 142 aaKnown RBP1.16□□□□□ -2.22
HERC4-215ENST00000515753 TOMM7Q9P0U1 55 aa1.16□□□□□ -2.22
HERC4-215ENST00000515753 PKHD1L1Q86WI1 4243 aa1.16□□□□□ -2.22
HERC4-215ENST00000515753 LRP2P98164 4655 aa1.15□□□□□ -2.23
HERC4-215ENST00000515753 SMIM27A0A1W2PRY6 76 aa1.15□□□□□ -2.23
HERC4-215ENST00000515753 D6R8Y8 96 aa1.15□□□□□ -2.23
HERC4-215ENST00000515753 CCKP06307 115 aa1.15□□□□□ -2.23
HERC4-215ENST00000515753 PEA15Q15121 130 aa1.15□□□□□ -2.23
HERC4-215ENST00000515753 Q8N8P6 123 aa1.15□□□□□ -2.23
HERC4-215ENST00000515753 AMELXQ99217 191 aa1.15□□□□□ -2.23
HERC4-215ENST00000515753 V9GYV3 84 aa1.15□□□□□ -2.23
HERC4-215ENST00000515753 TNXBP22105 4242 aa1.15□□□□□ -2.23
HERC4-215ENST00000515753 TEX49A0A1B0GTD5 131 aa1.14□□□□□ -2.23
HERC4-215ENST00000515753 C20orf202A1L168 122 aa1.14□□□□□ -2.23
HERC4-215ENST00000515753 IGIPA6NJ69 53 aa1.14□□□□□ -2.23
HERC4-215ENST00000515753 RPL39P62891 51 aaKnown RBP1.14□□□□□ -2.23
HERC4-215ENST00000515753 ADIRFQ15847 76 aa1.14□□□□□ -2.23
HERC4-215ENST00000515753 COX7B2Q8TF08 81 aa1.14□□□□□ -2.23
HERC4-215ENST00000515753 CDKN2A-AS1Q9UH64 79 aa1.14□□□□□ -2.23
HERC4-215ENST00000515753 ETDCA0A1B0GVM5 59 aa1.13□□□□□ -2.23
HERC4-215ENST00000515753 MRPL54Q6P161 138 aaKnown RBP1.13□□□□□ -2.23
HERC4-215ENST00000515753 C14orf144Q96I85 54 aa1.13□□□□□ -2.23
HERC4-215ENST00000515753 SPRR4Q96PI1 79 aa1.13□□□□□ -2.23
HERC4-215ENST00000515753 SMCO4Q9NRQ5 59 aa1.13□□□□□ -2.23
HERC4-215ENST00000515753 RNF213Q63HN8 5207 aa1.13□□□□□ -2.23
HERC4-215ENST00000515753 M0R2T5 61 aa1.12□□□□□ -2.23
HERC4-215ENST00000515753 SPRR1AP35321 89 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms