RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RANBP2P49792 3224 aaKnown RBP-0.95□□□□□ -2.56
HMGCS1-207ENST00000514610 HFM1A2PYH4 1435 aa-0.96□□□□□ -2.56
HMGCS1-207ENST00000514610 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.96□□□□□ -2.56
HMGCS1-207ENST00000514610 ZC3H13Q5T200 1668 aaKnown RBP-0.96□□□□□ -2.56
HMGCS1-207ENST00000514610 A0A087WXM4 84 aa-0.96□□□□□ -2.56
HMGCS1-207ENST00000514610 SMIM13P0DJ93 91 aa-0.96□□□□□ -2.56
HMGCS1-207ENST00000514610 ADIRFQ15847 76 aa-0.96□□□□□ -2.56
HMGCS1-207ENST00000514610 ITSN1Q15811 1721 aa-0.96□□□□□ -2.56
HMGCS1-207ENST00000514610 ABCC1P33527 1531 aa-0.96□□□□□ -2.56
HMGCS1-207ENST00000514610 KDM5DQ9BY66 1539 aa-0.96□□□□□ -2.56
HMGCS1-207ENST00000514610 PLCH1Q4KWH8 1693 aa-0.97□□□□□ -2.56
HMGCS1-207ENST00000514610 RALGAPBQ86X10 1494 aa-0.97□□□□□ -2.56
HMGCS1-207ENST00000514610 ARHGAP35Q9NRY4 1499 aa-0.97□□□□□ -2.56
HMGCS1-207ENST00000514610 FRYQ5TBA9 3013 aa-0.97□□□□□ -2.56
HMGCS1-207ENST00000514610 TEX15Q9BXT5 2789 aa-0.97□□□□□ -2.56
HMGCS1-207ENST00000514610 KIAA0586Q9BVV6 1533 aa-0.97□□□□□ -2.56
HMGCS1-207ENST00000514610 UBL5Q9BZL1 73 aa-0.97□□□□□ -2.56
HMGCS1-207ENST00000514610 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.97□□□□□ -2.56
HMGCS1-207ENST00000514610 LAMA3Q16787 3333 aa-0.97□□□□□ -2.56
HMGCS1-207ENST00000514610 RNF17Q9BXT8 1623 aaKnown RBP-0.97□□□□□ -2.57
HMGCS1-207ENST00000514610 A0A0C4DFX4 3053 aa-0.97□□□□□ -2.57
HMGCS1-207ENST00000514610 DEFB1P60022 68 aa-0.98□□□□□ -2.57
HMGCS1-207ENST00000514610 WT1-ASQ06250 92 aa-0.98□□□□□ -2.57
HMGCS1-207ENST00000514610 S100A13Q99584 98 aa-0.98□□□□□ -2.57
HMGCS1-207ENST00000514610 CFAP43Q8NDM7 1665 aa-0.98□□□□□ -2.57
HMGCS1-207ENST00000514610 RELNP78509 3460 aa-0.98□□□□□ -2.57
HMGCS1-207ENST00000514610 NIPBLQ6KC79 2804 aaeCLIP-0.98□□□□□ -2.57
HMGCS1-207ENST00000514610 CD163L1Q9NR16 1453 aa-0.99□□□□□ -2.57
HMGCS1-207ENST00000514610 INO80Q9ULG1 1556 aaPredicted RBP-0.99□□□□□ -2.57
HMGCS1-207ENST00000514610 CELSR3Q9NYQ7 3312 aa-0.99□□□□□ -2.57
HMGCS1-207ENST00000514610 MED14O60244 1454 aa-0.99□□□□□ -2.57
HMGCS1-207ENST00000514610 CCDC168Q8NDH2 2452 aa-1□□□□□ -2.57
HMGCS1-207ENST00000514610 MMP24-AS1A0A0U1RRL7 71 aa-1□□□□□ -2.57
HMGCS1-207ENST00000514610 CRIP1P50238 77 aa-1□□□□□ -2.57
HMGCS1-207ENST00000514610 GNG2P59768 71 aa-1□□□□□ -2.57
HMGCS1-207ENST00000514610 BVES-AS1Q5T3Y7 98 aa-1□□□□□ -2.57
HMGCS1-207ENST00000514610 ITSN2Q9NZM3 1697 aa-1□□□□□ -2.57
HMGCS1-207ENST00000514610 H3BUT2 72 aa-1.01□□□□□ -2.57
HMGCS1-207ENST00000514610 DCAF1Q9Y4B6 1507 aa-1.01□□□□□ -2.57
HMGCS1-207ENST00000514610 RICTORQ6R327 1708 aa-1.01□□□□□ -2.57
HMGCS1-207ENST00000514610 IGLV5-48A0A075B6I7 105 aa-1.02□□□□□ -2.57
HMGCS1-207ENST00000514610 CFAP74Q9C0B2 1584 aa-1.02□□□□□ -2.57
HMGCS1-207ENST00000514610 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.02□□□□□ -2.57
HMGCS1-207ENST00000514610 TOGARAM1Q9Y4F4 1720 aa-1.03□□□□□ -2.57
HMGCS1-207ENST00000514610 RB1CC1Q8TDY2 1594 aa-1.03□□□□□ -2.57
HMGCS1-207ENST00000514610 ANKARQ7Z5J8 1434 aa-1.03□□□□□ -2.57
HMGCS1-207ENST00000514610 TNP1P09430 55 aa-1.03□□□□□ -2.57
HMGCS1-207ENST00000514610 RPS27P42677 84 aaKnown RBP-1.03□□□□□ -2.57
HMGCS1-207ENST00000514610 RPS27LQ71UM5 84 aaKnown RBP-1.03□□□□□ -2.57
HMGCS1-207ENST00000514610 TJP1Q07157 1748 aa-1.03□□□□□ -2.58
HMGCS1-207ENST00000514610 ERVK-7P63135 1459 aa-1.04□□□□□ -2.58
HMGCS1-207ENST00000514610 ETDCA0A1B0GVM5 59 aa-1.04□□□□□ -2.58
HMGCS1-207ENST00000514610 CLPSL2Q6UWE3 100 aa-1.04□□□□□ -2.58
HMGCS1-207ENST00000514610 DNAH17Q9UFH2 4485 aa-1.05□□□□□ -2.58
HMGCS1-207ENST00000514610 H3BUA1 57 aa-1.05□□□□□ -2.58
HMGCS1-207ENST00000514610 SMR3BP02814 79 aaPredicted RBP-1.05□□□□□ -2.58
HMGCS1-207ENST00000514610 DEFB114Q30KQ6 69 aa-1.05□□□□□ -2.58
HMGCS1-207ENST00000514610 MINOS1Q5TGZ0 78 aa-1.05□□□□□ -2.58
HMGCS1-207ENST00000514610 KRTAP8-1Q8IUC2 63 aa-1.05□□□□□ -2.58
HMGCS1-207ENST00000514610 C18orf32Q8TCD1 76 aa-1.05□□□□□ -2.58
HMGCS1-207ENST00000514610 PARP4Q9UKK3 1724 aaKnown RBP-1.06□□□□□ -2.58
HMGCS1-207ENST00000514610 KIF1AQ12756 1690 aa-1.06□□□□□ -2.58
HMGCS1-207ENST00000514610 MT1XP80297 61 aa-1.06□□□□□ -2.58
HMGCS1-207ENST00000514610 C5orf42Q9H799 3197 aa-1.06□□□□□ -2.58
HMGCS1-207ENST00000514610 ITPR1Q14643 2758 aa-1.06□□□□□ -2.58
HMGCS1-207ENST00000514610 CCDC18Q5T9S5 1454 aa-1.06□□□□□ -2.58
HMGCS1-207ENST00000514610 TLN2Q9Y4G6 2542 aa-1.07□□□□□ -2.58
HMGCS1-207ENST00000514610 BPTFQ12830 3046 aa-1.07□□□□□ -2.58
HMGCS1-207ENST00000514610 ENHOQ6UWT2 76 aa-1.07□□□□□ -2.58
HMGCS1-207ENST00000514610 NOP10Q9NPE3 64 aaKnown RBP-1.07□□□□□ -2.58
HMGCS1-207ENST00000514610 LMTK2Q8IWU2 1503 aa-1.07□□□□□ -2.58
HMGCS1-207ENST00000514610 ANKRD36CQ5JPF3 1778 aa-1.07□□□□□ -2.58
HMGCS1-207ENST00000514610 NRAPQ86VF7 1730 aa-1.07□□□□□ -2.58
HMGCS1-207ENST00000514610 NHSQ6T4R5 1651 aa-1.07□□□□□ -2.58
HMGCS1-207ENST00000514610 MT1EP04732 61 aa-1.1□□□□□ -2.59
HMGCS1-207ENST00000514610 C6orf48Q9UBA6 75 aa-1.1□□□□□ -2.59
HMGCS1-207ENST00000514610 LRRIQ1Q96JM4 1722 aa-1.1□□□□□ -2.59
HMGCS1-207ENST00000514610 SPTBN5Q9NRC6 3674 aaKnown RBP-1.11□□□□□ -2.59
HMGCS1-207ENST00000514610 CDC42BPAQ5VT25 1732 aa-1.12□□□□□ -2.59
HMGCS1-207ENST00000514610 DNAH5Q8TE73 4624 aa-1.12□□□□□ -2.59
HMGCS1-207ENST00000514610 SPENQ96T58 3664 aaKnown RBP-1.12□□□□□ -2.59
HMGCS1-207ENST00000514610 DNAH10Q8IVF4 4471 aa-1.13□□□□□ -2.59
HMGCS1-207ENST00000514610 CHD7Q9P2D1 2997 aa-1.13□□□□□ -2.59
HMGCS1-207ENST00000514610 RRBP1Q9P2E9 1410 aaKnown RBP-1.13□□□□□ -2.59
HMGCS1-207ENST00000514610 CLASP1Q7Z460 1538 aa-1.13□□□□□ -2.59
HMGCS1-207ENST00000514610 ABCA8O94911 1581 aa-1.13□□□□□ -2.59
HMGCS1-207ENST00000514610 ABCC6O95255 1503 aa-1.14□□□□□ -2.59
HMGCS1-207ENST00000514610 H3BVH4 76 aa-1.14□□□□□ -2.59
HMGCS1-207ENST00000514610 FCER1GP30273 86 aa-1.14□□□□□ -2.59
HMGCS1-207ENST00000514610 LY75O60449 1722 aa-1.15□□□□□ -2.59
HMGCS1-207ENST00000514610 DIP2AQ14689 1571 aa-1.15□□□□□ -2.59
HMGCS1-207ENST00000514610 MAST1Q9Y2H9 1570 aa-1.15□□□□□ -2.59
HMGCS1-207ENST00000514610 MT1LQ93083 61 aa-1.15□□□□□ -2.59
HMGCS1-207ENST00000514610 LRBAP50851 2863 aa-1.15□□□□□ -2.59
HMGCS1-207ENST00000514610 DNMBPQ6XZF7 1577 aa-1.16□□□□□ -2.59
HMGCS1-207ENST00000514610 TRRAPQ9Y4A5 3859 aa-1.16□□□□□ -2.59
HMGCS1-207ENST00000514610 MT1HL1P0DM35 61 aa-1.16□□□□□ -2.6
HMGCS1-207ENST00000514610 ATXN8Q156A1 80 aa-1.16□□□□□ -2.6
HMGCS1-207ENST00000514610 NCBP2-AS2Q69YL0 99 aa-1.16□□□□□ -2.6
HMGCS1-207ENST00000514610 C3P01024 1663 aa-1.16□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms