RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 ANGP03950 147 aaKnown RBP4.09□□□□□ -1.75
NIPBL-208ENST00000514335 KRTAP10-3P60369 221 aa4.09□□□□□ -1.75
NIPBL-208ENST00000514335 ZANQ9Y493 2812 aa4.09□□□□□ -1.76
NIPBL-208ENST00000514335 C6orf48Q9UBA6 75 aa4.08□□□□□ -1.76
NIPBL-208ENST00000514335 K7EIL1 84 aa4.08□□□□□ -1.76
NIPBL-208ENST00000514335 KLK9Q2XQG4 91 aa4.08□□□□□ -1.76
NIPBL-208ENST00000514335 COX17Q14061 63 aa4.08□□□□□ -1.76
NIPBL-208ENST00000514335 TRRAPQ9Y4A5 3859 aa4.07□□□□□ -1.76
NIPBL-208ENST00000514335 VPS13CQ709C8 3753 aa4.07□□□□□ -1.76
NIPBL-208ENST00000514335 A0A0G2JQZ4 141 aa4.06□□□□□ -1.76
NIPBL-208ENST00000514335 H3BUA1 57 aa4.06□□□□□ -1.76
NIPBL-208ENST00000514335 Q6ZRX8 168 aa4.06□□□□□ -1.76
NIPBL-208ENST00000514335 G3V318 75 aa4.05□□□□□ -1.76
NIPBL-208ENST00000514335 DEFB105AQ8NG35 78 aa4.05□□□□□ -1.76
NIPBL-208ENST00000514335 SPACA4Q8TDM5 124 aa4.05□□□□□ -1.76
NIPBL-208ENST00000514335 R4GN34 69 aa4.05□□□□□ -1.76
NIPBL-208ENST00000514335 TYMSOSQ8TAI1 123 aa4.05□□□□□ -1.76
NIPBL-208ENST00000514335 EPPK1P58107 5090 aaKnown RBP4.05□□□□□ -1.76
NIPBL-208ENST00000514335 H0YAA0 97 aa4.05□□□□□ -1.76
NIPBL-208ENST00000514335 LELP1Q5T871 98 aa4.03□□□□□ -1.76
NIPBL-208ENST00000514335 C4orf3Q8WVX3 66 aa4.02□□□□□ -1.77
NIPBL-208ENST00000514335 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
NIPBL-208ENST00000514335 PRO2289Q9P1D8 64 aa4.02□□□□□ -1.77
NIPBL-208ENST00000514335 SVEP1Q4LDE5 3571 aa4.02□□□□□ -1.77
NIPBL-208ENST00000514335 DNAH7Q8WXX0 4024 aa4.02□□□□□ -1.77
NIPBL-208ENST00000514335 FAT2Q9NYQ8 4349 aa4.01□□□□□ -1.77
NIPBL-208ENST00000514335 HERC2O95714 4834 aa4□□□□□ -1.77
NIPBL-208ENST00000514335 RYR2Q92736 4967 aa4□□□□□ -1.77
NIPBL-208ENST00000514335 TENM1Q9UKZ4 2725 aa4□□□□□ -1.77
NIPBL-208ENST00000514335 KRTAP10-8P60410 259 aa4□□□□□ -1.77
NIPBL-208ENST00000514335 C14orf177Q52M58 125 aa4□□□□□ -1.77
NIPBL-208ENST00000514335 VWFP04275 2813 aa3.98□□□□□ -1.77
NIPBL-208ENST00000514335 TP53AIP1Q9HCN2 124 aa3.98□□□□□ -1.77
NIPBL-208ENST00000514335 SRRM2Q9UQ35 2752 aaKnown RBP3.98□□□□□ -1.77
NIPBL-208ENST00000514335 ROS1P08922 2347 aa3.98□□□□□ -1.77
NIPBL-208ENST00000514335 DNAH9Q9NYC9 4486 aa3.98□□□□□ -1.77
NIPBL-208ENST00000514335 LYNX1G3V0Z9 82 aa3.98□□□□□ -1.77
NIPBL-208ENST00000514335 LY6G6CO95867 125 aa3.97□□□□□ -1.77
NIPBL-208ENST00000514335 MMP24-AS1A0A0U1RRL7 71 aa3.97□□□□□ -1.77
NIPBL-208ENST00000514335 HTN1P15515 57 aa3.97□□□□□ -1.77
NIPBL-208ENST00000514335 KRTAP10-11P60412 298 aa3.96□□□□□ -1.78
NIPBL-208ENST00000514335 Q6ZSA8 131 aa3.96□□□□□ -1.78
NIPBL-208ENST00000514335 HYDINQ4G0P3 5121 aa3.95□□□□□ -1.78
NIPBL-208ENST00000514335 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
NIPBL-208ENST00000514335 A0A1B0GVY2 172 aa3.94□□□□□ -1.78
NIPBL-208ENST00000514335 UNQ6190/PRO20217Q6UXQ8 127 aa3.94□□□□□ -1.78
NIPBL-208ENST00000514335 DNAH17Q9UFH2 4485 aa3.94□□□□□ -1.78
NIPBL-208ENST00000514335 SPINK13Q1W4C9 94 aa3.94□□□□□ -1.78
NIPBL-208ENST00000514335 IGFL1Q6UW32 110 aa3.94□□□□□ -1.78
NIPBL-208ENST00000514335 CLPSL2Q6UWE3 100 aa3.93□□□□□ -1.78
NIPBL-208ENST00000514335 NOTCH3Q9UM47 2321 aa3.92□□□□□ -1.78
NIPBL-208ENST00000514335 TENM2Q9NT68 2774 aa3.92□□□□□ -1.78
NIPBL-208ENST00000514335 LY6EQ16553 131 aa3.91□□□□□ -1.78
NIPBL-208ENST00000514335 H3BUX3 64 aa3.9□□□□□ -1.79
NIPBL-208ENST00000514335 TENM3Q9P273 2699 aa3.89□□□□□ -1.79
NIPBL-208ENST00000514335 LYNX1P0DP58 116 aa3.89□□□□□ -1.79
NIPBL-208ENST00000514335 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
NIPBL-208ENST00000514335 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
NIPBL-208ENST00000514335 DEFB130BP0DP73 79 aa3.87□□□□□ -1.79
NIPBL-208ENST00000514335 DEFB130AP0DP74 79 aa3.87□□□□□ -1.79
NIPBL-208ENST00000514335 USMG5Q96IX5 58 aa3.87□□□□□ -1.79
NIPBL-208ENST00000514335 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
NIPBL-208ENST00000514335 LYSTQ99698 3801 aa3.86□□□□□ -1.79
NIPBL-208ENST00000514335 HUWE1Q7Z6Z7 4374 aaKnown RBP3.86□□□□□ -1.79
NIPBL-208ENST00000514335 RYR1P21817 5038 aa3.85□□□□□ -1.79
NIPBL-208ENST00000514335 ANAPC11Q9NYG5 84 aa3.85□□□□□ -1.79
NIPBL-208ENST00000514335 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
NIPBL-208ENST00000514335 DNAH10Q8IVF4 4471 aa3.84□□□□□ -1.79
NIPBL-208ENST00000514335 BRD3OSQ6XYD6 125 aa3.84□□□□□ -1.8
NIPBL-208ENST00000514335 CSMD3Q7Z407 3707 aa3.83□□□□□ -1.8
NIPBL-208ENST00000514335 GVQW2A0A096LPI5 108 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-208ENST00000514335 MRPL34Q9BQ48 92 aaKnown RBP3.83□□□□□ -1.8
NIPBL-208ENST00000514335 RHPN1-AS1Q9BWJ2 59 aa3.83□□□□□ -1.8
NIPBL-208ENST00000514335 DNAH2Q9P225 4427 aa3.82□□□□□ -1.8
NIPBL-208ENST00000514335 KMT2AQ03164 3969 aa3.82□□□□□ -1.8
NIPBL-208ENST00000514335 PLAC4Q8WY50 150 aa3.82□□□□□ -1.8
NIPBL-208ENST00000514335 DNAH11Q96DT5 4516 aa3.81□□□□□ -1.8
NIPBL-208ENST00000514335 PKHD1P08F94 4074 aa3.8□□□□□ -1.8
NIPBL-208ENST00000514335 VPS13BQ7Z7G8 4022 aa3.79□□□□□ -1.8
NIPBL-208ENST00000514335 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
NIPBL-208ENST00000514335 PLECQ15149 4684 aaKnown RBP3.78□□□□□ -1.81
NIPBL-208ENST00000514335 PKHD1L1Q86WI1 4243 aa3.78□□□□□ -1.81
NIPBL-208ENST00000514335 H3BNG1 76 aa3.77□□□□□ -1.81
NIPBL-208ENST00000514335 H1FX-AS1Q4G0G2 97 aa3.77□□□□□ -1.81
NIPBL-208ENST00000514335 APLNQ9ULZ1 77 aa3.77□□□□□ -1.81
NIPBL-208ENST00000514335 COL7A1Q02388 2944 aa3.76□□□□□ -1.81
NIPBL-208ENST00000514335 KRTAP3-1Q9BYR8 98 aa3.76□□□□□ -1.81
NIPBL-208ENST00000514335 A0A1B0GUV1 79 aa3.75□□□□□ -1.81
NIPBL-208ENST00000514335 SPINK1P00995 79 aa3.75□□□□□ -1.81
NIPBL-208ENST00000514335 VPS13DQ5THJ4 4388 aa3.75□□□□□ -1.81
NIPBL-208ENST00000514335 PRLHP81277 87 aa3.74□□□□□ -1.81
NIPBL-208ENST00000514335 DEFB136Q30KP8 78 aa3.74□□□□□ -1.81
NIPBL-208ENST00000514335 Q6ZRN7 208 aaPredicted RBP3.74□□□□□ -1.81
NIPBL-208ENST00000514335 DEFB131AP59861 70 aa3.73□□□□□ -1.81
NIPBL-208ENST00000514335 XP32Q5T750 250 aa3.73□□□□□ -1.81
NIPBL-208ENST00000514335 STAB2Q8WWQ8 2551 aa3.72□□□□□ -1.81
NIPBL-208ENST00000514335 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
NIPBL-208ENST00000514335 RPL37P61927 97 aaKnown RBP3.69□□□□□ -1.82
NIPBL-208ENST00000514335 KRTAP4-5Q9BYR2 181 aa3.69□□□□□ -1.82
NIPBL-208ENST00000514335 FRAS1Q86XX4 4008 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms