RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 ACYP2P14621 99 aa6.89□□□□□ -1.31
CTNND2-215ENST00000513588 PLAC8Q9NZF1 115 aa6.89□□□□□ -1.31
CTNND2-215ENST00000513588 SSBP3-AS1Q7Z2R9 100 aa6.89□□□□□ -1.31
CTNND2-215ENST00000513588 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
CTNND2-215ENST00000513588 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
CTNND2-215ENST00000513588 IGKV2D-30A0A075B6S6 120 aa6.86□□□□□ -1.31
CTNND2-215ENST00000513588 IGKV2-30P06310 120 aa6.86□□□□□ -1.31
CTNND2-215ENST00000513588 DMBT1Q9UGM3 2413 aaPredicted RBP6.86□□□□□ -1.31
CTNND2-215ENST00000513588 FAM229AH3BQW9 127 aa6.85□□□□□ -1.31
CTNND2-215ENST00000513588 SPINK7P58062 85 aa6.85□□□□□ -1.31
CTNND2-215ENST00000513588 LINC01554Q52M75 96 aa6.85□□□□□ -1.31
CTNND2-215ENST00000513588 CDC42SE1Q9NRR8 79 aa6.84□□□□□ -1.31
CTNND2-215ENST00000513588 Q96NJ1 140 aa6.84□□□□□ -1.31
CTNND2-215ENST00000513588 PRR26Q8N8Z3 221 aa6.84□□□□□ -1.31
CTNND2-215ENST00000513588 A0A087X002 238 aa6.83□□□□□ -1.32
CTNND2-215ENST00000513588 NOTCH2NLQ7Z3S9 236 aa6.83□□□□□ -1.32
CTNND2-215ENST00000513588 Q6ZR54 194 aa6.83□□□□□ -1.32
CTNND2-215ENST00000513588 HRES1P13985 223 aa6.82□□□□□ -1.32
CTNND2-215ENST00000513588 Q75L30 129 aa6.81□□□□□ -1.32
CTNND2-215ENST00000513588 A0A1B0GU69 56 aa6.8□□□□□ -1.32
CTNND2-215ENST00000513588 A6NN06 94 aa6.78□□□□□ -1.32
CTNND2-215ENST00000513588 TGP01266 2768 aa6.78□□□□□ -1.32
CTNND2-215ENST00000513588 LINC01558Q9Y6Z2 57 aa6.78□□□□□ -1.32
CTNND2-215ENST00000513588 SPINK1P00995 79 aa6.77□□□□□ -1.33
CTNND2-215ENST00000513588 TYMSOSQ8TAI1 123 aa6.77□□□□□ -1.33
CTNND2-215ENST00000513588 PLA2G1BP04054 148 aaKnown RBP6.76□□□□□ -1.33
CTNND2-215ENST00000513588 Q5W150 140 aa6.75□□□□□ -1.33
CTNND2-215ENST00000513588 CSAG1Q6PB30 78 aa6.72□□□□□ -1.33
CTNND2-215ENST00000513588 KRTAP10-2P60368 255 aa6.72□□□□□ -1.33
CTNND2-215ENST00000513588 ASB16-AS1Q495Z4 193 aa6.71□□□□□ -1.34
CTNND2-215ENST00000513588 COL7A1Q02388 2944 aa6.69□□□□□ -1.34
CTNND2-215ENST00000513588 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
CTNND2-215ENST00000513588 KRTAP10-1P60331 282 aa6.65□□□□□ -1.35
CTNND2-215ENST00000513588 CRIPTQ9P021 101 aa6.65□□□□□ -1.35
CTNND2-215ENST00000513588 UQCR11O14957 56 aa6.64□□□□□ -1.35
CTNND2-215ENST00000513588 HUWE1Q7Z6Z7 4374 aaKnown RBP6.64□□□□□ -1.35
CTNND2-215ENST00000513588 LINC00304Q8N9R0 145 aa6.63□□□□□ -1.35
CTNND2-215ENST00000513588 DMAC1Q96GE9 116 aa6.63□□□□□ -1.35
CTNND2-215ENST00000513588 MIR22HGQ0VDD5 57 aa6.61□□□□□ -1.35
CTNND2-215ENST00000513588 Q8N1X5 172 aa6.61□□□□□ -1.35
CTNND2-215ENST00000513588 SMR3BP02814 79 aaPredicted RBP6.6□□□□□ -1.35
CTNND2-215ENST00000513588 KRTAP13-2Q52LG2 175 aa6.6□□□□□ -1.35
CTNND2-215ENST00000513588 FBN3Q75N90 2809 aa6.58□□□□□ -1.36
CTNND2-215ENST00000513588 ANK2Q01484 3957 aa6.58□□□□□ -1.36
CTNND2-215ENST00000513588 C9orf92A6NGG3 77 aa6.57□□□□□ -1.36
CTNND2-215ENST00000513588 MEGF8Q7Z7M0 2845 aa6.57□□□□□ -1.36
CTNND2-215ENST00000513588 DNAH10Q8IVF4 4471 aa6.53□□□□□ -1.36
CTNND2-215ENST00000513588 SPINT4Q6UDR6 99 aa6.5□□□□□ -1.37
CTNND2-215ENST00000513588 K7ERS5 55 aa6.49□□□□□ -1.37
CTNND2-215ENST00000513588 KRTAP13-3Q3SY46 172 aa6.49□□□□□ -1.37
CTNND2-215ENST00000513588 Q6ZSA8 131 aa6.46□□□□□ -1.38
CTNND2-215ENST00000513588 KRTAP1-4P0C5Y4 121 aa6.45□□□□□ -1.38
CTNND2-215ENST00000513588 DNAH9Q9NYC9 4486 aa6.42□□□□□ -1.38
CTNND2-215ENST00000513588 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
CTNND2-215ENST00000513588 KRTAP16-1A8MUX0 517 aa6.41□□□□□ -1.38
CTNND2-215ENST00000513588 PLECQ15149 4684 aaKnown RBP6.39□□□□□ -1.39
CTNND2-215ENST00000513588 DNAH3Q8TD57 4116 aa6.37□□□□□ -1.39
CTNND2-215ENST00000513588 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
CTNND2-215ENST00000513588 LYSTQ99698 3801 aa6.35□□□□□ -1.39
CTNND2-215ENST00000513588 A0A1B0GU33 70 aa6.35□□□□□ -1.39
CTNND2-215ENST00000513588 RPS29P62273 56 aaKnown RBP6.33□□□□□ -1.4
CTNND2-215ENST00000513588 ROMO1P60602 79 aa6.32□□□□□ -1.4
CTNND2-215ENST00000513588 DNAH1Q9P2D7 4330 aa6.32□□□□□ -1.4
CTNND2-215ENST00000513588 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
CTNND2-215ENST00000513588 NDUFAF8A1L188 74 aa6.27□□□□□ -1.41
CTNND2-215ENST00000513588 STARD9Q9P2P6 4700 aa6.25□□□□□ -1.41
CTNND2-215ENST00000513588 A8MUU9 505 aa6.24□□□□□ -1.41
CTNND2-215ENST00000513588 DNHD1Q96M86 4753 aa6.23□□□□□ -1.41
CTNND2-215ENST00000513588 C20orf166-AS1Q96NR2 134 aa6.23□□□□□ -1.41
CTNND2-215ENST00000513588 VPS13DQ5THJ4 4388 aa6.23□□□□□ -1.41
CTNND2-215ENST00000513588 H1FX-AS1Q4G0G2 97 aa6.22□□□□□ -1.41
CTNND2-215ENST00000513588 COX6B2Q6YFQ2 88 aa6.22□□□□□ -1.41
CTNND2-215ENST00000513588 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
CTNND2-215ENST00000513588 DNAH7Q8WXX0 4024 aa6.21□□□□□ -1.42
CTNND2-215ENST00000513588 A0A0D9SG42 100 aa6.2□□□□□ -1.42
CTNND2-215ENST00000513588 DNAH8Q96JB1 4490 aa6.18□□□□□ -1.42
CTNND2-215ENST00000513588 PRKDCP78527 4128 aaKnown RBP6.17□□□□□ -1.42
CTNND2-215ENST00000513588 DNAH17Q9UFH2 4485 aa6.16□□□□□ -1.42
CTNND2-215ENST00000513588 KMT2AQ03164 3969 aa6.16□□□□□ -1.42
CTNND2-215ENST00000513588 DNAH11Q96DT5 4516 aa6.15□□□□□ -1.42
CTNND2-215ENST00000513588 H0YAA0 97 aa6.13□□□□□ -1.43
CTNND2-215ENST00000513588 FRAS1Q86XX4 4008 aa6.11□□□□□ -1.43
CTNND2-215ENST00000513588 Q5VSD8 79 aa6.11□□□□□ -1.43
CTNND2-215ENST00000513588 S4R3F8 94 aa6.1□□□□□ -1.43
CTNND2-215ENST00000513588 DYNC2H1Q8NCM8 4307 aaKnown RBP6.1□□□□□ -1.43
CTNND2-215ENST00000513588 DNAH2Q9P225 4427 aa6.07□□□□□ -1.44
CTNND2-215ENST00000513588 HECTD4Q9Y4D8 3996 aa6.07□□□□□ -1.44
CTNND2-215ENST00000513588 RPL37P61927 97 aaKnown RBP6.06□□□□□ -1.44
CTNND2-215ENST00000513588 P0C880 135 aa6.05□□□□□ -1.44
CTNND2-215ENST00000513588 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
CTNND2-215ENST00000513588 LRP1BQ9NZR2 4599 aa6.04□□□□□ -1.44
CTNND2-215ENST00000513588 KRTAP21-3Q3LHN1 58 aa6.03□□□□□ -1.44
CTNND2-215ENST00000513588 C10orf95Q9H7T3 257 aa6.02□□□□□ -1.45
CTNND2-215ENST00000513588 A0A1B0GVY2 172 aa6.01□□□□□ -1.45
CTNND2-215ENST00000513588 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
CTNND2-215ENST00000513588 DNAH6Q9C0G6 4158 aa5.99□□□□□ -1.45
CTNND2-215ENST00000513588 XP32Q5T750 250 aa5.95□□□□□ -1.46
CTNND2-215ENST00000513588 DNAH5Q8TE73 4624 aa5.94□□□□□ -1.46
CTNND2-215ENST00000513588 KRTAP10-4P60372 401 aaPredicted RBP5.91□□□□□ -1.46
CTNND2-215ENST00000513588 VPS13BQ7Z7G8 4022 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms