RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 ANKRD50Q9ULJ7 1429 aa-0.82□□□□□ -2.54
SMN1-208ENST00000513228 DIP2BQ9P265 1576 aa-0.83□□□□□ -2.54
SMN1-208ENST00000513228 URB2Q14146 1524 aaKnown RBP-0.83□□□□□ -2.54
SMN1-208ENST00000513228 MAGI3Q5TCQ9 1506 aa-0.83□□□□□ -2.54
SMN1-208ENST00000513228 MT2AP02795 61 aa-0.83□□□□□ -2.54
SMN1-208ENST00000513228 MT1MQ8N339 61 aa-0.83□□□□□ -2.54
SMN1-208ENST00000513228 KIF14Q15058 1648 aa-0.83□□□□□ -2.54
SMN1-208ENST00000513228 TTC37Q6PGP7 1564 aa-0.83□□□□□ -2.54
SMN1-208ENST00000513228 DEPDC5O75140 1603 aa-0.84□□□□□ -2.54
SMN1-208ENST00000513228 MAP3K4Q9Y6R4 1608 aa-0.84□□□□□ -2.54
SMN1-208ENST00000513228 NDUFB1O75438 58 aa-0.84□□□□□ -2.54
SMN1-208ENST00000513228 MT1GP13640 62 aa-0.84□□□□□ -2.54
SMN1-208ENST00000513228 Q9H521 79 aa-0.84□□□□□ -2.54
SMN1-208ENST00000513228 ARFGEF2Q9Y6D5 1785 aa-0.84□□□□□ -2.54
SMN1-208ENST00000513228 CEP290O15078 2479 aa-0.84□□□□□ -2.54
SMN1-208ENST00000513228 KRTAP19-5Q3LI72 72 aa-0.85□□□□□ -2.55
SMN1-208ENST00000513228 V9GYS6 101 aa-0.85□□□□□ -2.55
SMN1-208ENST00000513228 PPLO60437 1756 aa-0.85□□□□□ -2.55
SMN1-208ENST00000513228 PIK3C2BO00750 1634 aa-0.86□□□□□ -2.55
SMN1-208ENST00000513228 SPEGQ15772 3267 aa-0.86□□□□□ -2.55
SMN1-208ENST00000513228 PVALEFA0A1B0GWK0 134 aa-0.86□□□□□ -2.55
SMN1-208ENST00000513228 MT1EP04732 61 aa-0.86□□□□□ -2.55
SMN1-208ENST00000513228 ACYP1P07311 99 aa-0.86□□□□□ -2.55
SMN1-208ENST00000513228 PRLHP81277 87 aa-0.86□□□□□ -2.55
SMN1-208ENST00000513228 WDFY3Q8IZQ1 3526 aa-0.86□□□□□ -2.55
SMN1-208ENST00000513228 LYNX1G3V0Z9 82 aa-0.87□□□□□ -2.55
SMN1-208ENST00000513228 DEFB1P60022 68 aa-0.87□□□□□ -2.55
SMN1-208ENST00000513228 MT1LQ93083 61 aa-0.87□□□□□ -2.55
SMN1-208ENST00000513228 S4R3F8 94 aa-0.87□□□□□ -2.55
SMN1-208ENST00000513228 VPS13CQ709C8 3753 aa-0.87□□□□□ -2.55
SMN1-208ENST00000513228 CENPEQ02224 2701 aa-0.87□□□□□ -2.55
SMN1-208ENST00000513228 PLCH1Q4KWH8 1693 aa-0.88□□□□□ -2.55
SMN1-208ENST00000513228 CRYBG3Q68DQ2 2970 aa-0.88□□□□□ -2.55
SMN1-208ENST00000513228 DDX60LQ5H9U9 1706 aaKnown RBP-0.88□□□□□ -2.55
SMN1-208ENST00000513228 UMAD1C9J7I0 102 aa-0.88□□□□□ -2.55
SMN1-208ENST00000513228 IFI6P09912 130 aa-0.88□□□□□ -2.55
SMN1-208ENST00000513228 DEFB130BP0DP73 79 aa-0.88□□□□□ -2.55
SMN1-208ENST00000513228 DEFB130AP0DP74 79 aa-0.88□□□□□ -2.55
SMN1-208ENST00000513228 TDRG1Q3Y452 100 aa-0.88□□□□□ -2.55
SMN1-208ENST00000513228 MGAQ8IWI9 3026 aa-0.88□□□□□ -2.55
SMN1-208ENST00000513228 CCDC88BA6NC98 1476 aa-0.88□□□□□ -2.55
SMN1-208ENST00000513228 SPTAN1Q13813 2472 aaKnown RBP-0.89□□□□□ -2.55
SMN1-208ENST00000513228 IFI27P40305 119 aaPredicted RBP-0.89□□□□□ -2.55
SMN1-208ENST00000513228 DCHS1Q96JQ0 3298 aa-0.89□□□□□ -2.55
SMN1-208ENST00000513228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.89□□□□□ -2.55
SMN1-208ENST00000513228 NDUFA4O00483 81 aa-0.9□□□□□ -2.55
SMN1-208ENST00000513228 SMR3BP02814 79 aaPredicted RBP-0.9□□□□□ -2.55
SMN1-208ENST00000513228 IAPPP10997 89 aa-0.9□□□□□ -2.55
SMN1-208ENST00000513228 EP400Q96L91 3159 aa-0.91□□□□□ -2.56
SMN1-208ENST00000513228 CEP350Q5VT06 3117 aa-0.91□□□□□ -2.56
SMN1-208ENST00000513228 WDFY4Q6ZS81 3184 aa-0.92□□□□□ -2.56
SMN1-208ENST00000513228 NREPQ16612 68 aa-0.92□□□□□ -2.56
SMN1-208ENST00000513228 CFAP43Q8NDM7 1665 aa-0.92□□□□□ -2.56
SMN1-208ENST00000513228 RICTORQ6R327 1708 aa-0.92□□□□□ -2.56
SMN1-208ENST00000513228 DNAH14Q0VDD8 3507 aa-0.93□□□□□ -2.56
SMN1-208ENST00000513228 KANTRA0A1W2PQU2 76 aa-0.93□□□□□ -2.56
SMN1-208ENST00000513228 MT1FP04733 61 aa-0.93□□□□□ -2.56
SMN1-208ENST00000513228 DEFB106AQ8N104 65 aa-0.93□□□□□ -2.56
SMN1-208ENST00000513228 UACAQ9BZF9 1416 aa-0.93□□□□□ -2.56
SMN1-208ENST00000513228 CDC42BPGQ6DT37 1551 aa-0.93□□□□□ -2.56
SMN1-208ENST00000513228 ITSN1Q15811 1721 aa-0.93□□□□□ -2.56
SMN1-208ENST00000513228 CFAP54Q96N23 3096 aa-0.94□□□□□ -2.56
SMN1-208ENST00000513228 DEFB110Q30KQ9 67 aa-0.94□□□□□ -2.56
SMN1-208ENST00000513228 ATP5EP2Q5VTU8 51 aa-0.94□□□□□ -2.56
SMN1-208ENST00000513228 FRYLO94915 3013 aa-0.95□□□□□ -2.56
SMN1-208ENST00000513228 DEFB121Q5J5C9 76 aa-0.95□□□□□ -2.56
SMN1-208ENST00000513228 MUC3AQ02505 3323 aa-0.95□□□□□ -2.56
SMN1-208ENST00000513228 ZC3H13Q5T200 1668 aaKnown RBP-0.95□□□□□ -2.56
SMN1-208ENST00000513228 TJP1Q07157 1748 aa-0.95□□□□□ -2.56
SMN1-208ENST00000513228 MKI67P46013 3256 aaKnown RBP-0.96□□□□□ -2.56
SMN1-208ENST00000513228 DEFB131BA0A096LNP1 70 aa-0.96□□□□□ -2.56
SMN1-208ENST00000513228 HMGA1P17096 107 aaKnown RBP-0.96□□□□□ -2.56
SMN1-208ENST00000513228 KRTAP8-1Q8IUC2 63 aa-0.96□□□□□ -2.56
SMN1-208ENST00000513228 ANKRD36CQ5JPF3 1778 aa-0.96□□□□□ -2.56
SMN1-208ENST00000513228 SZT2Q5T011 3432 aa-0.96□□□□□ -2.56
SMN1-208ENST00000513228 RNF17Q9BXT8 1623 aaKnown RBP-0.97□□□□□ -2.56
SMN1-208ENST00000513228 KDM5DQ9BY66 1539 aa-0.97□□□□□ -2.56
SMN1-208ENST00000513228 SMIM13P0DJ93 91 aa-0.97□□□□□ -2.56
SMN1-208ENST00000513228 THOC2Q8NI27 1593 aaKnown RBP-0.97□□□□□ -2.56
SMN1-208ENST00000513228 ST20Q9HBF5 79 aa-0.98□□□□□ -2.57
SMN1-208ENST00000513228 ITSN2Q9NZM3 1697 aa-0.98□□□□□ -2.57
SMN1-208ENST00000513228 PCNTO95613 3336 aa-0.99□□□□□ -2.57
SMN1-208ENST00000513228 A0A087WXM4 84 aa-0.99□□□□□ -2.57
SMN1-208ENST00000513228 CDC42BPAQ5VT25 1732 aa-0.99□□□□□ -2.57
SMN1-208ENST00000513228 VCANP13611 3396 aa-0.99□□□□□ -2.57
SMN1-208ENST00000513228 CD163L1Q9NR16 1453 aa-0.99□□□□□ -2.57
SMN1-208ENST00000513228 ARHGAP35Q9NRY4 1499 aa-0.99□□□□□ -2.57
SMN1-208ENST00000513228 KIAA0586Q9BVV6 1533 aa-0.99□□□□□ -2.57
SMN1-208ENST00000513228 PARP4Q9UKK3 1724 aaKnown RBP-1□□□□□ -2.57
SMN1-208ENST00000513228 H3BUT2 72 aa-1□□□□□ -2.57
SMN1-208ENST00000513228 ADIRFQ15847 76 aa-1□□□□□ -2.57
SMN1-208ENST00000513228 KCNQ1DNQ9H478 68 aa-1□□□□□ -2.57
SMN1-208ENST00000513228 MED14O60244 1454 aa-1□□□□□ -2.57
SMN1-208ENST00000513228 DCAF1Q9Y4B6 1507 aa-1□□□□□ -2.57
SMN1-208ENST00000513228 LOC400499M0QZD8 3231 aa-1□□□□□ -2.57
SMN1-208ENST00000513228 EIF2AK4Q9P2K8 1649 aaKnown RBP-1□□□□□ -2.57
SMN1-208ENST00000513228 CRIP1P50238 77 aa-1.01□□□□□ -2.57
SMN1-208ENST00000513228 CFAP47Q6ZTR5 3102 aa-1.01□□□□□ -2.57
SMN1-208ENST00000513228 TOGARAM1Q9Y4F4 1720 aa-1.01□□□□□ -2.57
SMN1-208ENST00000513228 HFM1A2PYH4 1435 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms