RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ALKAL2Q6UX46 152 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 DEFB108BQ8NET1 73 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 DYNLRB1Q9NP97 96 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 SPANXA1Q9NS26 97 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 GSKIPQ9P0R6 139 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 KAAG1Q9UBP8 84 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 LINC01558Q9Y6Z2 57 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 CFAP74Q9C0B2 1584 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 TOP2AP11388 1531 aaKnown RBP-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 ATP7AQ04656 1500 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 URB2Q14146 1524 aaKnown RBP-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 ABCA10Q8WWZ4 1543 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 CCDC141Q6ZP82 1450 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 EDC4Q6P2E9 1401 aaKnown RBP-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 SPTY2D1-AS1A0A0U1RR47 76 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 H3BUX3 64 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 SFT2D2O95562 160 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 S100A8P05109 93 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 FCER1GP30273 86 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 Q0VG73 95 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 DEFB114Q30KQ6 69 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 NCMAPQ5T1S8 102 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 C10orf113Q5VZT2 155 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 TSLPQ969D9 159 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 MGST2Q99735 147 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 SNRNP25Q9BV90 132 aaKnown RBP-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 TPT1P8Q9HAU6 139 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 FAIMQ9NVQ4 179 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 SERP1Q9Y6X1 66 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 AKAP12Q02952 1782 aa-0.78□□□□□ -2.53
PDGFC-208ENST00000512711 TOP2BQ02880 1626 aa-0.78□□□□□ -2.54
PDGFC-208ENST00000512711 MROH1Q8NDA8 1641 aa-0.78□□□□□ -2.54
PDGFC-208ENST00000512711 DUOX1Q9NRD9 1551 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 SYCP2Q9BX26 1530 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 TRBV7-3A0A075B6L6 115 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 ETDCA0A1B0GVM5 59 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 TMEM262E9PQX1 116 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 TSPAN19P0C672 248 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 NBEAP1P0C6P0 100 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 HIST1H1DP16402 221 aaKnown RBP-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 CKS1BP61024 79 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 LINC01590Q5TEZ4 76 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 MINOS1Q5TGZ0 78 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 TSTD1Q8NFU3 115 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 TMEM263Q8WUH6 116 aaKnown RBP-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 LCN9Q8WX39 176 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 SMIM2Q9BVW6 85 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 C6orf48Q9UBA6 75 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 IQGAP1P46940 1657 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 ABCC8Q09428 1581 aa-0.79□□□□□ -2.54
PDGFC-208ENST00000512711 CCNB3Q8WWL7 1395 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 CLTCQ00610 1675 aaKnown RBP-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 A0A1B0GU69 56 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 LOC285095A0A1B0GVY8 99 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 CHKB-CPT1BH3BT56 60 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 SNCAP37840 140 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 COPZ1P61923 177 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 SEC11AP67812 179 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 SMCO1Q147U7 214 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 PSMG4Q5JS54 123 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 MRPL54Q6P161 138 aaKnown RBP-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 PDCD10Q9BUL8 212 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 PSENENQ9NZ42 101 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 ABRACLQ9P1F3 81 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 ARHGAP5Q13017 1502 aa-0.8□□□□□ -2.54
PDGFC-208ENST00000512711 ADCY10Q96PN6 1610 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 H3BUT2 72 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 NDUFA1O15239 70 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 LEPROTL1O95214 131 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 IGLC1P0CG04 106 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 DEFB131AP59861 70 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 B2MP61769 119 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 LZICQ8WZA0 190 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 COX14Q96I36 57 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 NXT2Q9NPJ8 142 aaKnown RBP-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 COPZ2Q9P299 210 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 UGGT2Q9NYU1 1516 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 HFM1A2PYH4 1435 aa-0.81□□□□□ -2.54
PDGFC-208ENST00000512711 CPS1P31327 1500 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 SMIM27A0A1W2PRY6 76 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 NDUFB1O75438 58 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 ARMS2P0C7Q2 107 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 SAA2P0DJI9 122 aaPredicted RBP-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 CCDC58Q4VC31 144 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 C12orf73Q69YU5 71 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 COPS9Q8WXC6 57 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 TCEAL4Q96EI5 215 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 FAM167A-AS1Q96KT0 104 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 LINC00470Q9BZP3 86 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 TMEM191AQ9H0A3 160 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 KCNQ1DNQ9H478 68 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 TOMM7Q9P0U1 55 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 ARL2-SNX15V9GYD0 113 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 PRXQ9BXM0 1461 aa-0.82□□□□□ -2.54
PDGFC-208ENST00000512711 A0A087WWC5 75 aa-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 hADV29S1A0JD25 119 aa-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 TMEM218A2RU14 115 aa-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 CRIP1P50238 77 aa-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 RPS25P62851 125 aaKnown RBP-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 WHAMMP3Q1A5X7 153 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms