RNA–Protein interactions for RNA: ENST00000511754.5

TNPO1-208, Transcript of transportin 1, humanhuman

TSL 5

Gene TNPO1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-208ENST00000511754 LRP1Q07954 4544 aaKnown RBP0.21□□□□□ -2.38
TNPO1-208ENST00000511754 ITPR3Q14573 2671 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 TACC2O95359 2948 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
TNPO1-208ENST00000511754 TRIOO75962 3097 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 KNL1Q8NG31 2342 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 ITPR1Q14643 2758 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 LOC400499M0QZD8 3231 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 GPR98Q8WXG9 6306 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 WDFY4Q6ZS81 3184 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 FLGP20930 4061 aaPredicted RBP0.2□□□□□ -2.38
TNPO1-208ENST00000511754 XIRP2A4UGR9 3374 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 SPRR2DP22532 72 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 SNRPGP62308 76 aaKnown RBP0.2□□□□□ -2.38
TNPO1-208ENST00000511754 LAMA2P24043 3122 aaKnown RBP0.2□□□□□ -2.38
TNPO1-208ENST00000511754 CELSR3Q9NYQ7 3312 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 NIPBLQ6KC79 2804 aaeCLIP0.2□□□□□ -2.38
TNPO1-208ENST00000511754 LAMA5O15230 3695 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 C5orf42Q9H799 3197 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 HECTD4Q9Y4D8 3996 aa0.2□□□□□ -2.38
TNPO1-208ENST00000511754 DCHS1Q96JQ0 3298 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 NF1P21359 2839 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 AKAP13Q12802 2813 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 BRCA2P51587 3418 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 KMT2AQ03164 3969 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 PCNTO95613 3336 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 UNC80Q8N2C7 3258 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 ATMQ13315 3056 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 PRUNE2Q8WUY3 3088 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 WDR87Q6ZQQ6 2873 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 SETXQ7Z333 2677 aaKnown RBP0.19□□□□□ -2.38
TNPO1-208ENST00000511754 PKHD1L1Q86WI1 4243 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 H0YGX0 51 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 M0R1W7 72 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 DEFB130BP0DP73 79 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 DEFB130AP0DP74 79 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 FCER1GP30273 86 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 MINOS1Q5TGZ0 78 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 SMIM2Q9BVW6 85 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 TMEM167BQ9NRX6 74 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 LAMA3Q16787 3333 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 CFAP47Q6ZTR5 3102 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 FLNCQ14315 2725 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 GOLGB1Q14789 3259 aaKnown RBP0.19□□□□□ -2.38
TNPO1-208ENST00000511754 PDE4DIPQ5VU43 2346 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 SRCAPQ6ZRS2 3230 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 DNAH3Q8TD57 4116 aa0.19□□□□□ -2.38
TNPO1-208ENST00000511754 PKHD1P08F94 4074 aa0.18□□□□□ -2.38
TNPO1-208ENST00000511754 UTP20O75691 2785 aaKnown RBP0.18□□□□□ -2.38
TNPO1-208ENST00000511754 DCHS2Q6V1P9 2916 aa0.18□□□□□ -2.38
TNPO1-208ENST00000511754 COL12A1Q99715 3063 aa0.18□□□□□ -2.38
TNPO1-208ENST00000511754 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
TNPO1-208ENST00000511754 TNXBP22105 4242 aa0.18□□□□□ -2.38
TNPO1-208ENST00000511754 DNAH7Q8WXX0 4024 aa0.18□□□□□ -2.38
TNPO1-208ENST00000511754 NDUFA1O15239 70 aa0.18□□□□□ -2.38
TNPO1-208ENST00000511754 SRRM2Q9UQ35 2752 aaKnown RBP0.18□□□□□ -2.38
TNPO1-208ENST00000511754 SZT2Q5T011 3432 aa0.18□□□□□ -2.38
TNPO1-208ENST00000511754 LAMA1P25391 3075 aa0.18□□□□□ -2.38
TNPO1-208ENST00000511754 USP34Q70CQ2 3546 aa0.18□□□□□ -2.38
TNPO1-208ENST00000511754 VPS13AQ96RL7 3174 aa0.18□□□□□ -2.38
TNPO1-208ENST00000511754 MAP1AP78559 2803 aaPredicted RBP0.18□□□□□ -2.38
TNPO1-208ENST00000511754 UTRNP46939 3433 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 COL7A1Q02388 2944 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 HIVEP1P15822 2718 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 DMXL1Q9Y485 3027 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 CSMD2Q7Z408 3487 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 MXRA5Q9NR99 2828 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 ZANQ9Y493 2812 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 MKI67P46013 3256 aaKnown RBP0.17□□□□□ -2.38
TNPO1-208ENST00000511754 PKD1P98161 4303 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 IGLV5-48A0A075B6I7 105 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 WDFY3Q8IZQ1 3526 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 LINC00308Q8TCZ7 52 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 C6orf48Q9UBA6 75 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 CMYA5Q8N3K9 4069 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 ASPMQ8IZT6 3477 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 CSMD1Q96PZ7 3565 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 SPEGQ15772 3267 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 NSD1Q96L73 2696 aaPredicted RBP0.17□□□□□ -2.38
TNPO1-208ENST00000511754 CENPFP49454 3210 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 ADGRG4Q8IZF6 3080 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 CUBNO60494 3623 aa0.17□□□□□ -2.38
TNPO1-208ENST00000511754 TEP1Q99973 2627 aaKnown RBP0.17□□□□□ -2.38
TNPO1-208ENST00000511754 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
TNPO1-208ENST00000511754 VPS13DQ5THJ4 4388 aa0.16□□□□□ -2.38
TNPO1-208ENST00000511754 DMBT1Q9UGM3 2413 aaPredicted RBP0.16□□□□□ -2.38
TNPO1-208ENST00000511754 DNAH6Q9C0G6 4158 aa0.16□□□□□ -2.38
TNPO1-208ENST00000511754 WNK1Q9H4A3 2382 aa0.16□□□□□ -2.38
TNPO1-208ENST00000511754 SPRR2BP35325 72 aa0.16□□□□□ -2.38
TNPO1-208ENST00000511754 RPS27P42677 84 aaKnown RBP0.16□□□□□ -2.38
TNPO1-208ENST00000511754 DEFB131AP59861 70 aa0.16□□□□□ -2.38
TNPO1-208ENST00000511754 RPS27LQ71UM5 84 aaKnown RBP0.16□□□□□ -2.38
TNPO1-208ENST00000511754 MAP1BP46821 2468 aaKnown RBP0.16□□□□□ -2.38
TNPO1-208ENST00000511754 MYO15AQ9UKN7 3530 aa0.16□□□□□ -2.38
TNPO1-208ENST00000511754 APC2O95996 2303 aa0.16□□□□□ -2.38
TNPO1-208ENST00000511754 USP9YO00507 2555 aaPredicted RBP0.16□□□□□ -2.38
TNPO1-208ENST00000511754 SETD2Q9BYW2 2564 aaPredicted RBP0.16□□□□□ -2.38
TNPO1-208ENST00000511754 CREBBPQ92793 2442 aa0.16□□□□□ -2.38
TNPO1-208ENST00000511754 NBEAL2Q6ZNJ1 2754 aa0.16□□□□□ -2.38
TNPO1-208ENST00000511754 TEX15Q9BXT5 2789 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms