RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 JMJD7-PLA2G4BH0Y9G9 81 aa7.37□□□□□ -1.23
DDX41-212ENST00000511040 ATP11AUNQ6ZP68 121 aa7.37□□□□□ -1.23
DDX41-212ENST00000511040 C14orf132Q9NPU4 83 aa7.37□□□□□ -1.23
DDX41-212ENST00000511040 KRTAP19-2Q3LHN2 52 aa7.36□□□□□ -1.23
DDX41-212ENST00000511040 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
DDX41-212ENST00000511040 Q6ZQT0 140 aa7.36□□□□□ -1.23
DDX41-212ENST00000511040 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
DDX41-212ENST00000511040 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
DDX41-212ENST00000511040 LINC00313P59037 77 aa7.35□□□□□ -1.23
DDX41-212ENST00000511040 C20orf166-AS1Q96NR2 134 aa7.35□□□□□ -1.23
DDX41-212ENST00000511040 IGHV6-1A0A0B4J1U7 121 aa7.34□□□□□ -1.23
DDX41-212ENST00000511040 A8MUU9 505 aa7.34□□□□□ -1.23
DDX41-212ENST00000511040 ETDBQ3ZM63 59 aa7.34□□□□□ -1.23
DDX41-212ENST00000511040 KRTAP16-1A8MUX0 517 aa7.32□□□□□ -1.24
DDX41-212ENST00000511040 A0A1B0GVX0 72 aa7.3□□□□□ -1.24
DDX41-212ENST00000511040 PDE6GP18545 87 aa7.3□□□□□ -1.24
DDX41-212ENST00000511040 C21orf62-AS1Q17RA5 79 aa7.29□□□□□ -1.24
DDX41-212ENST00000511040 J3KT08 172 aa7.27□□□□□ -1.25
DDX41-212ENST00000511040 MT1HP80294 61 aa7.26□□□□□ -1.25
DDX41-212ENST00000511040 COX6B2Q6YFQ2 88 aa7.26□□□□□ -1.25
DDX41-212ENST00000511040 CRCT1Q9UGL9 99 aa7.26□□□□□ -1.25
DDX41-212ENST00000511040 A0A1B0GW54 56 aa7.25□□□□□ -1.25
DDX41-212ENST00000511040 C8orf87E5RJ46 101 aa7.25□□□□□ -1.25
DDX41-212ENST00000511040 NDUFB1O75438 58 aa7.22□□□□□ -1.25
DDX41-212ENST00000511040 NREPQ16612 68 aa7.22□□□□□ -1.25
DDX41-212ENST00000511040 A8MWP4 228 aa7.21□□□□□ -1.26
DDX41-212ENST00000511040 IGKV3D-7A0A0C4DH55 119 aa7.2□□□□□ -1.26
DDX41-212ENST00000511040 C8orf17Q9NRJ1 99 aa7.18□□□□□ -1.26
DDX41-212ENST00000511040 M0R2T5 61 aa7.15□□□□□ -1.26
DDX41-212ENST00000511040 PRR15Q8IV56 129 aa7.15□□□□□ -1.26
DDX41-212ENST00000511040 LINC00846Q9NV44 126 aa7.15□□□□□ -1.26
DDX41-212ENST00000511040 FLGP20930 4061 aaPredicted RBP7.15□□□□□ -1.27
DDX41-212ENST00000511040 ZCCHC13Q8WW36 166 aaKnown RBP7.13□□□□□ -1.27
DDX41-212ENST00000511040 Q6ZVQ6 151 aa7.12□□□□□ -1.27
DDX41-212ENST00000511040 Q8N9P0 234 aaPredicted RBP7.12□□□□□ -1.27
DDX41-212ENST00000511040 K7EQZ3 153 aa7.11□□□□□ -1.27
DDX41-212ENST00000511040 MMP24-AS1A0A0U1RRL7 71 aa7.1□□□□□ -1.27
DDX41-212ENST00000511040 BPY2O14599 106 aa7.1□□□□□ -1.27
DDX41-212ENST00000511040 KRTAP10-6P60371 365 aaPredicted RBP7.1□□□□□ -1.27
DDX41-212ENST00000511040 FAM240AA0A1B0GVK7 77 aa7.08□□□□□ -1.28
DDX41-212ENST00000511040 HRES1P13985 223 aa7.08□□□□□ -1.28
DDX41-212ENST00000511040 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
DDX41-212ENST00000511040 Q8N9L7 120 aa7.07□□□□□ -1.28
DDX41-212ENST00000511040 FAM236DA0A1B0GTK5 79 aa7.06□□□□□ -1.28
DDX41-212ENST00000511040 FAM236CP0DP71 79 aa7.06□□□□□ -1.28
DDX41-212ENST00000511040 TMEM254Q8TBM7 123 aa7.06□□□□□ -1.28
DDX41-212ENST00000511040 hDV103S1A0JD37 113 aa7.05□□□□□ -1.28
DDX41-212ENST00000511040 MRPL34Q9BQ48 92 aaKnown RBP7.05□□□□□ -1.28
DDX41-212ENST00000511040 ACYP1P07311 99 aa7.04□□□□□ -1.28
DDX41-212ENST00000511040 SPINK7P58062 85 aa7.04□□□□□ -1.28
DDX41-212ENST00000511040 LCE2DQ5TA82 110 aaPredicted RBP7.04□□□□□ -1.28
DDX41-212ENST00000511040 NDUFS5O43920 106 aa7.03□□□□□ -1.28
DDX41-212ENST00000511040 MPLKIPQ8TAP9 179 aa7.03□□□□□ -1.28
DDX41-212ENST00000511040 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
DDX41-212ENST00000511040 WFDC13Q8IUB5 93 aa7.02□□□□□ -1.29
DDX41-212ENST00000511040 UBL5Q9BZL1 73 aa7.01□□□□□ -1.29
DDX41-212ENST00000511040 J3QR89 54 aa7□□□□□ -1.29
DDX41-212ENST00000511040 K7ERU9 68 aa7□□□□□ -1.29
DDX41-212ENST00000511040 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
DDX41-212ENST00000511040 CASC2Q6XLA1 102 aa6.98□□□□□ -1.29
DDX41-212ENST00000511040 HCG22E2RYF7 251 aa6.94□□□□□ -1.3
DDX41-212ENST00000511040 Q5W150 140 aa6.94□□□□□ -1.3
DDX41-212ENST00000511040 LINC00643Q86TS7 51 aa6.94□□□□□ -1.3
DDX41-212ENST00000511040 CXCL6P80162 114 aa6.91□□□□□ -1.3
DDX41-212ENST00000511040 IGKV2D-30A0A075B6S6 120 aa6.9□□□□□ -1.3
DDX41-212ENST00000511040 MT-ATP8P03928 68 aa6.9□□□□□ -1.3
DDX41-212ENST00000511040 IGKV2-30P06310 120 aa6.9□□□□□ -1.3
DDX41-212ENST00000511040 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
DDX41-212ENST00000511040 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
DDX41-212ENST00000511040 A0A087WVE0 104 aa6.85□□□□□ -1.31
DDX41-212ENST00000511040 C7orf65Q6ZTY9 151 aa6.84□□□□□ -1.31
DDX41-212ENST00000511040 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.81□□□□□ -1.32
DDX41-212ENST00000511040 MT2AP02795 61 aa6.81□□□□□ -1.32
DDX41-212ENST00000511040 HIST1H4AP62805 103 aaKnown RBP6.81□□□□□ -1.32
DDX41-212ENST00000511040 MT1FP04733 61 aa6.77□□□□□ -1.33
DDX41-212ENST00000511040 H1FX-AS1Q4G0G2 97 aa6.77□□□□□ -1.33
DDX41-212ENST00000511040 C4orf26Q17RF5 130 aa6.76□□□□□ -1.33
DDX41-212ENST00000511040 KRTAP10-10P60014 251 aa6.74□□□□□ -1.33
DDX41-212ENST00000511040 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
DDX41-212ENST00000511040 TP53AIP1Q9HCN2 124 aa6.74□□□□□ -1.33
DDX41-212ENST00000511040 FAM236AA0A1B0GUQ0 79 aa6.67□□□□□ -1.34
DDX41-212ENST00000511040 FAM236BA0A1B0GV22 79 aa6.67□□□□□ -1.34
DDX41-212ENST00000511040 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
DDX41-212ENST00000511040 USH2AO75445 5202 aa6.66□□□□□ -1.34
DDX41-212ENST00000511040 KRTAP3-1Q9BYR8 98 aa6.65□□□□□ -1.34
DDX41-212ENST00000511040 C1orf64Q8NEQ6 169 aa6.64□□□□□ -1.35
DDX41-212ENST00000511040 OCR1Q9BZK8 76 aa6.64□□□□□ -1.35
DDX41-212ENST00000511040 TRAV22A0A0B4J277 110 aa6.63□□□□□ -1.35
DDX41-212ENST00000511040 LCE2BO14633 110 aa6.62□□□□□ -1.35
DDX41-212ENST00000511040 CYP4F30PQ9H0H9 118 aa6.62□□□□□ -1.35
DDX41-212ENST00000511040 UQCRQO14949 82 aa6.59□□□□□ -1.35
DDX41-212ENST00000511040 C5orf47Q569G3 176 aa6.59□□□□□ -1.35
DDX41-212ENST00000511040 LOC101927531A0A1B0GV80 90 aa6.58□□□□□ -1.36
DDX41-212ENST00000511040 H0Y9P7 68 aa6.58□□□□□ -1.36
DDX41-212ENST00000511040 S4R3F8 94 aa6.58□□□□□ -1.36
DDX41-212ENST00000511040 SSPOA2VEC9 5147 aa6.56□□□□□ -1.36
DDX41-212ENST00000511040 SCGB1A1P11684 91 aa6.56□□□□□ -1.36
DDX41-212ENST00000511040 LCA10Q71F78 164 aa6.54□□□□□ -1.36
DDX41-212ENST00000511040 ATOX1O00244 68 aa6.53□□□□□ -1.36
DDX41-212ENST00000511040 TRAV7A0A075B6U4 112 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms