RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 LINC00483Q53H64 154 aa3.96□□□□□ -1.78
TRAPPC11-206ENST00000509857 NDUFC1O43677 76 aa3.95□□□□□ -1.78
TRAPPC11-206ENST00000509857 TMEM258P61165 79 aa3.95□□□□□ -1.78
TRAPPC11-206ENST00000509857 IGFL1Q6UW32 110 aa3.95□□□□□ -1.78
TRAPPC11-206ENST00000509857 DNAH6Q9C0G6 4158 aa3.95□□□□□ -1.78
TRAPPC11-206ENST00000509857 KLKP1Q107X0 134 aa3.94□□□□□ -1.78
TRAPPC11-206ENST00000509857 CSMD3Q7Z407 3707 aa3.94□□□□□ -1.78
TRAPPC11-206ENST00000509857 PRKDCP78527 4128 aaKnown RBP3.93□□□□□ -1.78
TRAPPC11-206ENST00000509857 J3KT08 172 aa3.93□□□□□ -1.78
TRAPPC11-206ENST00000509857 DPH3Q96FX2 82 aa3.93□□□□□ -1.78
TRAPPC11-206ENST00000509857 RPS28P62857 69 aaKnown RBP3.92□□□□□ -1.78
TRAPPC11-206ENST00000509857 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
TRAPPC11-206ENST00000509857 SS18L2Q9UHA2 77 aa3.92□□□□□ -1.78
TRAPPC11-206ENST00000509857 VPS13DQ5THJ4 4388 aa3.92□□□□□ -1.78
TRAPPC11-206ENST00000509857 ATP5EP56381 51 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-206ENST00000509857 PLECQ15149 4684 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-206ENST00000509857 LCE6AA0A183 80 aa3.9□□□□□ -1.79
TRAPPC11-206ENST00000509857 LY6G6CO95867 125 aa3.9□□□□□ -1.79
TRAPPC11-206ENST00000509857 Q6ZSA8 131 aa3.9□□□□□ -1.79
TRAPPC11-206ENST00000509857 PSORS1C2Q9UIG4 136 aa3.9□□□□□ -1.79
TRAPPC11-206ENST00000509857 STARD9Q9P2P6 4700 aa3.89□□□□□ -1.79
TRAPPC11-206ENST00000509857 A0A087WSZ3 146 aa3.89□□□□□ -1.79
TRAPPC11-206ENST00000509857 CD164Q04900 197 aa3.89□□□□□ -1.79
TRAPPC11-206ENST00000509857 SCXQ7RTU7 201 aa3.89□□□□□ -1.79
TRAPPC11-206ENST00000509857 LYSTQ99698 3801 aa3.89□□□□□ -1.79
TRAPPC11-206ENST00000509857 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
TRAPPC11-206ENST00000509857 A8MWP4 228 aa3.88□□□□□ -1.79
TRAPPC11-206ENST00000509857 HCG22E2RYF7 251 aa3.88□□□□□ -1.79
TRAPPC11-206ENST00000509857 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
TRAPPC11-206ENST00000509857 TENM2Q9NT68 2774 aa3.87□□□□□ -1.79
TRAPPC11-206ENST00000509857 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
TRAPPC11-206ENST00000509857 H3BPC8 53 aa3.87□□□□□ -1.79
TRAPPC11-206ENST00000509857 IGLV7-43P04211 117 aa3.87□□□□□ -1.79
TRAPPC11-206ENST00000509857 C5orf47Q569G3 176 aa3.87□□□□□ -1.79
TRAPPC11-206ENST00000509857 SSBP3-AS1Q7Z2R9 100 aa3.87□□□□□ -1.79
TRAPPC11-206ENST00000509857 PRR15Q8IV56 129 aa3.87□□□□□ -1.79
TRAPPC11-206ENST00000509857 TMEM254Q8TBM7 123 aa3.87□□□□□ -1.79
TRAPPC11-206ENST00000509857 HECTD4Q9Y4D8 3996 aa3.87□□□□□ -1.79
TRAPPC11-206ENST00000509857 DNAH10Q8IVF4 4471 aa3.86□□□□□ -1.79
TRAPPC11-206ENST00000509857 H7BZZ5 65 aa3.86□□□□□ -1.79
TRAPPC11-206ENST00000509857 K7EQZ3 153 aa3.86□□□□□ -1.79
TRAPPC11-206ENST00000509857 NDUFB1O75438 58 aa3.86□□□□□ -1.79
TRAPPC11-206ENST00000509857 ASB16-AS1Q495Z4 193 aa3.86□□□□□ -1.79
TRAPPC11-206ENST00000509857 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
TRAPPC11-206ENST00000509857 A0A0U1RQV1 116 aa3.85□□□□□ -1.79
TRAPPC11-206ENST00000509857 FAM229BQ4G0N7 80 aa3.85□□□□□ -1.79
TRAPPC11-206ENST00000509857 LINC00336Q6ZUF6 198 aa3.85□□□□□ -1.79
TRAPPC11-206ENST00000509857 ALMS1Q8TCU4 4167 aa3.84□□□□□ -1.79
TRAPPC11-206ENST00000509857 MEGF8Q7Z7M0 2845 aa3.84□□□□□ -1.79
TRAPPC11-206ENST00000509857 FAM236DA0A1B0GTK5 79 aa3.84□□□□□ -1.79
TRAPPC11-206ENST00000509857 FAM236CP0DP71 79 aa3.84□□□□□ -1.79
TRAPPC11-206ENST00000509857 MOBPQ13875 183 aa3.84□□□□□ -1.79
TRAPPC11-206ENST00000509857 Q5XG85 94 aa3.84□□□□□ -1.79
TRAPPC11-206ENST00000509857 FBN3Q75N90 2809 aa3.84□□□□□ -1.8
TRAPPC11-206ENST00000509857 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
TRAPPC11-206ENST00000509857 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
TRAPPC11-206ENST00000509857 CIRBP-AS1Q8TBR5 109 aa3.83□□□□□ -1.8
TRAPPC11-206ENST00000509857 TP53AIP1Q9HCN2 124 aa3.83□□□□□ -1.8
TRAPPC11-206ENST00000509857 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
TRAPPC11-206ENST00000509857 CASC2Q6XLA1 102 aa3.82□□□□□ -1.8
TRAPPC11-206ENST00000509857 ZCCHC13Q8WW36 166 aaKnown RBP3.82□□□□□ -1.8
TRAPPC11-206ENST00000509857 CYSTM1Q9H1C7 97 aa3.82□□□□□ -1.8
TRAPPC11-206ENST00000509857 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
TRAPPC11-206ENST00000509857 MP68P56378 58 aa3.81□□□□□ -1.8
TRAPPC11-206ENST00000509857 KRTAP10-10P60014 251 aa3.81□□□□□ -1.8
TRAPPC11-206ENST00000509857 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
TRAPPC11-206ENST00000509857 Q96NJ1 140 aa3.81□□□□□ -1.8
TRAPPC11-206ENST00000509857 DNAH17Q9UFH2 4485 aa3.81□□□□□ -1.8
TRAPPC11-206ENST00000509857 DNHD1Q96M86 4753 aa3.8□□□□□ -1.8
TRAPPC11-206ENST00000509857 TGP01266 2768 aa3.8□□□□□ -1.8
TRAPPC11-206ENST00000509857 DNAH2Q9P225 4427 aa3.79□□□□□ -1.8
TRAPPC11-206ENST00000509857 A0A0G2JQZ4 141 aa3.79□□□□□ -1.8
TRAPPC11-206ENST00000509857 MMP24-AS1A0A0U1RRL7 71 aa3.79□□□□□ -1.8
TRAPPC11-206ENST00000509857 A0A1B0GVX0 72 aa3.79□□□□□ -1.8
TRAPPC11-206ENST00000509857 hDV103S1A0JD37 113 aa3.79□□□□□ -1.8
TRAPPC11-206ENST00000509857 C8orf87E5RJ46 101 aa3.79□□□□□ -1.8
TRAPPC11-206ENST00000509857 DEFB116Q30KQ4 102 aa3.79□□□□□ -1.8
TRAPPC11-206ENST00000509857 SNURFQ9Y675 71 aa3.79□□□□□ -1.8
TRAPPC11-206ENST00000509857 SPANXA2-OT1Q8N9U9 137 aa3.78□□□□□ -1.8
TRAPPC11-206ENST00000509857 C8orf17Q9NRJ1 99 aa3.78□□□□□ -1.8
TRAPPC11-206ENST00000509857 FRAS1Q86XX4 4008 aa3.77□□□□□ -1.81
TRAPPC11-206ENST00000509857 RPS29P62273 56 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-206ENST00000509857 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
TRAPPC11-206ENST00000509857 LIMD2Q9BT23 127 aa3.77□□□□□ -1.81
TRAPPC11-206ENST00000509857 CYP4F30PQ9H0H9 118 aa3.77□□□□□ -1.81
TRAPPC11-206ENST00000509857 TRAV22A0A0B4J277 110 aa3.76□□□□□ -1.81
TRAPPC11-206ENST00000509857 SPINK6Q6UWN8 80 aa3.76□□□□□ -1.81
TRAPPC11-206ENST00000509857 SMIM26A0A096LP01 95 aa3.75□□□□□ -1.81
TRAPPC11-206ENST00000509857 H0Y9P7 68 aa3.75□□□□□ -1.81
TRAPPC11-206ENST00000509857 MRPL34Q9BQ48 92 aaKnown RBP3.75□□□□□ -1.81
TRAPPC11-206ENST00000509857 DNAH8Q96JB1 4490 aa3.74□□□□□ -1.81
TRAPPC11-206ENST00000509857 SPINK1P00995 79 aa3.74□□□□□ -1.81
TRAPPC11-206ENST00000509857 SPAG11AQ6PDA7 123 aa3.73□□□□□ -1.81
TRAPPC11-206ENST00000509857 KRTAP13-2Q52LG2 175 aa3.72□□□□□ -1.81
TRAPPC11-206ENST00000509857 LINC00208Q96KT6 92 aa3.72□□□□□ -1.81
TRAPPC11-206ENST00000509857 SRRM2Q9UQ35 2752 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-206ENST00000509857 DNAH11Q96DT5 4516 aa3.71□□□□□ -1.82
TRAPPC11-206ENST00000509857 IGHV6-1A0A0B4J1U7 121 aa3.71□□□□□ -1.82
TRAPPC11-206ENST00000509857 HRCT1Q6UXD1 115 aa3.71□□□□□ -1.82
TRAPPC11-206ENST00000509857 C1orf64Q8NEQ6 169 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms