RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 MGPP08493 103 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 CCL3L1P16619 93 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 CCL18P55774 89 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 FAM103A1Q9BTL3 118 aaKnown RBP1.11□□□□□ -2.23
PDE4D-218ENST00000509368 HSPG2P98160 4391 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 KRTAP10-1P60331 282 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 COX7B2Q8TF08 81 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 SMIM27A0A1W2PRY6 76 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 F8VRH5 84 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 H3BVH4 76 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 PRH1P02810 166 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 C5orf56Q8N8D9 126 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 SPRR4Q96PI1 79 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 WFDC6Q9BQY6 131 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 PKHD1P08F94 4074 aa1.1□□□□□ -2.23
PDE4D-218ENST00000509368 TRBV6-4A0A1B0GX49 114 aa1.09□□□□□ -2.23
PDE4D-218ENST00000509368 M0R135 149 aa1.09□□□□□ -2.23
PDE4D-218ENST00000509368 LY6G6CO95867 125 aa1.09□□□□□ -2.23
PDE4D-218ENST00000509368 IGLV3-1P01715 115 aa1.09□□□□□ -2.23
PDE4D-218ENST00000509368 PLNP26678 52 aa1.09□□□□□ -2.23
PDE4D-218ENST00000509368 CSAG1Q6PB30 78 aa1.09□□□□□ -2.23
PDE4D-218ENST00000509368 SPATA8Q6RVD6 105 aa1.09□□□□□ -2.23
PDE4D-218ENST00000509368 C10orf99Q6UWK7 81 aa1.09□□□□□ -2.23
PDE4D-218ENST00000509368 USMG5Q96IX5 58 aa1.09□□□□□ -2.23
PDE4D-218ENST00000509368 H3BNG1 76 aa1.09□□□□□ -2.24
PDE4D-218ENST00000509368 M0R2N4 97 aa1.09□□□□□ -2.24
PDE4D-218ENST00000509368 SPACA4Q8TDM5 124 aa1.09□□□□□ -2.24
PDE4D-218ENST00000509368 CPSF4LA6NMK7 179 aaKnown RBP1.08□□□□□ -2.24
PDE4D-218ENST00000509368 INE1O15225 51 aa1.08□□□□□ -2.24
PDE4D-218ENST00000509368 DNAL4O96015 105 aa1.08□□□□□ -2.24
PDE4D-218ENST00000509368 C10orf55Q5SWW7 151 aa1.08□□□□□ -2.24
PDE4D-218ENST00000509368 TMEM263Q8WUH6 116 aaKnown RBP1.08□□□□□ -2.24
PDE4D-218ENST00000509368 ZCCHC13Q8WW36 166 aaKnown RBP1.08□□□□□ -2.24
PDE4D-218ENST00000509368 JMJD7-PLA2G4BH0Y9G9 81 aa1.08□□□□□ -2.24
PDE4D-218ENST00000509368 H0Y9P7 68 aa1.08□□□□□ -2.24
PDE4D-218ENST00000509368 TFF1P04155 84 aa1.08□□□□□ -2.24
PDE4D-218ENST00000509368 GDF5OSQ5U4N7 250 aa1.08□□□□□ -2.24
PDE4D-218ENST00000509368 PRR15LQ9BU68 103 aa1.08□□□□□ -2.24
PDE4D-218ENST00000509368 IGKV2-40A0A087WW87 121 aaPredicted RBP1.07□□□□□ -2.24
PDE4D-218ENST00000509368 TRBV6-1A0A0K0K1D8 114 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 NDUFA3O95167 84 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 IGKV2D-40P01614 121 aaPredicted RBP1.07□□□□□ -2.24
PDE4D-218ENST00000509368 APOBP04114 4563 aaKnown RBP1.07□□□□□ -2.24
PDE4D-218ENST00000509368 IGKV4-1P06312 121 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 FXYD6P3P58550 94 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 PRB3Q04118 309 aaPredicted RBP1.07□□□□□ -2.24
PDE4D-218ENST00000509368 UBL5Q9BZL1 73 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 LRP1BQ9NZR2 4599 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 V9GYV3 84 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 LOC110117498A0A087WWA1 95 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 NREPQ16612 68 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 DEFB136Q30KP8 78 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 SFTA2Q6UW10 78 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 LINC00208Q96KT6 92 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 TMEM14CQ9P0S9 112 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 APLNQ9ULZ1 77 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 SORL1Q92673 2214 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 CTXND1A0A1B0GTU2 59 aa1.07□□□□□ -2.24
PDE4D-218ENST00000509368 DNAH5Q8TE73 4624 aa1.06□□□□□ -2.24
PDE4D-218ENST00000509368 H3BSH0 61 aa1.06□□□□□ -2.24
PDE4D-218ENST00000509368 KRTAP10-10P60014 251 aa1.06□□□□□ -2.24
PDE4D-218ENST00000509368 LINC01590Q5TEZ4 76 aa1.06□□□□□ -2.24
PDE4D-218ENST00000509368 UBR4Q5T4S7 5183 aa1.06□□□□□ -2.24
PDE4D-218ENST00000509368 IGKV3D-7A0A0C4DH55 119 aa1.06□□□□□ -2.24
PDE4D-218ENST00000509368 IGKV3OR2-268A0A0C4DH90 116 aa1.06□□□□□ -2.24
PDE4D-218ENST00000509368 J3QRE1 110 aa1.06□□□□□ -2.24
PDE4D-218ENST00000509368 ZNF625Q96I27 306 aaPredicted RBP1.05□□□□□ -2.24
PDE4D-218ENST00000509368 DMBT1Q9UGM3 2413 aaPredicted RBP1.05□□□□□ -2.24
PDE4D-218ENST00000509368 MYCBP2O75592 4640 aa1.05□□□□□ -2.24
PDE4D-218ENST00000509368 VPS13BQ7Z7G8 4022 aa1.05□□□□□ -2.24
PDE4D-218ENST00000509368 HMCN2Q8NDA2 5059 aa1.05□□□□□ -2.24
PDE4D-218ENST00000509368 MACF1Q9UPN3 7388 aaKnown RBP1.05□□□□□ -2.24
PDE4D-218ENST00000509368 TRAV21A0A0B4J279 112 aa1.05□□□□□ -2.24
PDE4D-218ENST00000509368 IGIPA6NJ69 53 aa1.05□□□□□ -2.24
PDE4D-218ENST00000509368 A8MTW9 85 aa1.05□□□□□ -2.24
PDE4D-218ENST00000509368 RNASE3P12724 160 aaKnown RBP1.05□□□□□ -2.24
PDE4D-218ENST00000509368 COA5Q86WW8 74 aa1.05□□□□□ -2.24
PDE4D-218ENST00000509368 SNURFQ9Y675 71 aa1.05□□□□□ -2.24
PDE4D-218ENST00000509368 SRRM2Q9UQ35 2752 aaKnown RBP1.05□□□□□ -2.24
PDE4D-218ENST00000509368 PKHD1L1Q86WI1 4243 aa1.04□□□□□ -2.24
PDE4D-218ENST00000509368 G3V318 75 aa1.04□□□□□ -2.24
PDE4D-218ENST00000509368 FAT1Q14517 4588 aa1.04□□□□□ -2.24
PDE4D-218ENST00000509368 A0A087WTM6 91 aa1.04□□□□□ -2.24
PDE4D-218ENST00000509368 H0YGX0 51 aa1.04□□□□□ -2.24
PDE4D-218ENST00000509368 RPS27P42677 84 aaKnown RBP1.04□□□□□ -2.24
PDE4D-218ENST00000509368 RPL37AP61513 92 aaKnown RBP1.04□□□□□ -2.24
PDE4D-218ENST00000509368 WFDC10AQ9H1F0 79 aa1.04□□□□□ -2.24
PDE4D-218ENST00000509368 KCNQ1DNQ9H478 68 aa1.04□□□□□ -2.24
PDE4D-218ENST00000509368 NBDYA0A0U1RRE5 68 aa1.03□□□□□ -2.24
PDE4D-218ENST00000509368 FCER1GP30273 86 aa1.03□□□□□ -2.24
PDE4D-218ENST00000509368 A0A087WVE0 104 aa1.03□□□□□ -2.24
PDE4D-218ENST00000509368 NCR3O14931 201 aa1.03□□□□□ -2.24
PDE4D-218ENST00000509368 TRGV2A0A075B6R0 118 aa1.02□□□□□ -2.25
PDE4D-218ENST00000509368 NDUFA4O00483 81 aa1.02□□□□□ -2.25
PDE4D-218ENST00000509368 FXYD3Q14802 87 aa1.02□□□□□ -2.25
PDE4D-218ENST00000509368 DEFB135Q30KP9 77 aa1.02□□□□□ -2.25
PDE4D-218ENST00000509368 UNQ6190/PRO20217Q6UXQ8 127 aa1.02□□□□□ -2.25
PDE4D-218ENST00000509368 Q6ZRN7 208 aaPredicted RBP1.02□□□□□ -2.25
PDE4D-218ENST00000509368 LEAP2Q969E1 77 aa1.02□□□□□ -2.25
PDE4D-218ENST00000509368 TNCP24821 2201 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms