RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
COL4A3BP-206ENST00000508809 KRTDAPP60985 99 aa4.25□□□□□ -1.73
COL4A3BP-206ENST00000508809 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
COL4A3BP-206ENST00000508809 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
COL4A3BP-206ENST00000508809 HIST1H4GQ99525 98 aa4.25□□□□□ -1.73
COL4A3BP-206ENST00000508809 SNHG12Q9BXW3 62 aa4.25□□□□□ -1.73
COL4A3BP-206ENST00000508809 H3BUT2 72 aa4.24□□□□□ -1.73
COL4A3BP-206ENST00000508809 COA6Q5JTJ3 125 aaKnown RBP4.24□□□□□ -1.73
COL4A3BP-206ENST00000508809 TEN1Q86WV5 123 aa4.24□□□□□ -1.73
COL4A3BP-206ENST00000508809 OCR1Q9BZK8 76 aa4.24□□□□□ -1.73
COL4A3BP-206ENST00000508809 FAM236DA0A1B0GTK5 79 aa4.23□□□□□ -1.73
COL4A3BP-206ENST00000508809 FAM236CP0DP71 79 aa4.23□□□□□ -1.73
COL4A3BP-206ENST00000508809 HRES1P13985 223 aa4.23□□□□□ -1.73
COL4A3BP-206ENST00000508809 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
COL4A3BP-206ENST00000508809 LINC00846Q9NV44 126 aa4.23□□□□□ -1.73
COL4A3BP-206ENST00000508809 ATOH7Q8N100 152 aa4.22□□□□□ -1.73
COL4A3BP-206ENST00000508809 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
COL4A3BP-206ENST00000508809 BVES-AS1Q5T3Y7 98 aa4.21□□□□□ -1.74
COL4A3BP-206ENST00000508809 A0A087WSZ3 146 aa4.2□□□□□ -1.74
COL4A3BP-206ENST00000508809 FAM240AA0A1B0GVK7 77 aa4.2□□□□□ -1.74
COL4A3BP-206ENST00000508809 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
COL4A3BP-206ENST00000508809 LOC105371267A0A1B0GV96 52 aa4.19□□□□□ -1.74
COL4A3BP-206ENST00000508809 LINC00313P59037 77 aa4.19□□□□□ -1.74
COL4A3BP-206ENST00000508809 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
COL4A3BP-206ENST00000508809 C12orf57Q99622 126 aa4.17□□□□□ -1.74
COL4A3BP-206ENST00000508809 NEBP20929 6669 aa4.16□□□□□ -1.74
COL4A3BP-206ENST00000508809 A0A1W2PNM2 257 aa4.16□□□□□ -1.74
COL4A3BP-206ENST00000508809 H3BMG7 143 aa4.15□□□□□ -1.75
COL4A3BP-206ENST00000508809 H0YGX0 51 aa4.14□□□□□ -1.75
COL4A3BP-206ENST00000508809 SNCGO76070 127 aa4.14□□□□□ -1.75
COL4A3BP-206ENST00000508809 IGKV4-1P06312 121 aa4.14□□□□□ -1.75
COL4A3BP-206ENST00000508809 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
COL4A3BP-206ENST00000508809 SIGMAR1Q99720 223 aa4.14□□□□□ -1.75
COL4A3BP-206ENST00000508809 LINC00472Q9H8W2 130 aa4.13□□□□□ -1.75
COL4A3BP-206ENST00000508809 TRBV7-4A0A0J9YYF1 115 aa4.12□□□□□ -1.75
COL4A3BP-206ENST00000508809 A0A1B0GX51 115 aa4.12□□□□□ -1.75
COL4A3BP-206ENST00000508809 A8MWP4 228 aa4.11□□□□□ -1.75
COL4A3BP-206ENST00000508809 FABP2P12104 132 aa4.09□□□□□ -1.75
COL4A3BP-206ENST00000508809 SPINK7P58062 85 aa4.09□□□□□ -1.75
COL4A3BP-206ENST00000508809 IGHV6-1A0A0B4J1U7 121 aa4.08□□□□□ -1.76
COL4A3BP-206ENST00000508809 A0A0B4J2C4 111 aa4.08□□□□□ -1.76
COL4A3BP-206ENST00000508809 DLEU1O43261 78 aa4.08□□□□□ -1.76
COL4A3BP-206ENST00000508809 COX8AP10176 69 aa4.08□□□□□ -1.76
COL4A3BP-206ENST00000508809 DEFB116Q30KQ4 102 aa4.08□□□□□ -1.76
COL4A3BP-206ENST00000508809 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
COL4A3BP-206ENST00000508809 ANKRD29Q8N6D5 301 aa4.08□□□□□ -1.76
COL4A3BP-206ENST00000508809 RAB37Q96AX2 223 aa4.08□□□□□ -1.76
COL4A3BP-206ENST00000508809 HIST1H2BLQ99880 126 aa4.08□□□□□ -1.76
COL4A3BP-206ENST00000508809 C8orf87E5RJ46 101 aa4.07□□□□□ -1.76
COL4A3BP-206ENST00000508809 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
COL4A3BP-206ENST00000508809 A0A1B0GVX0 72 aa4.05□□□□□ -1.76
COL4A3BP-206ENST00000508809 PSMB2P49721 201 aa4.05□□□□□ -1.76
COL4A3BP-206ENST00000508809 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
COL4A3BP-206ENST00000508809 A0A1B0GV72 72 aa4.04□□□□□ -1.76
COL4A3BP-206ENST00000508809 H3BQ85 93 aa4.04□□□□□ -1.76
COL4A3BP-206ENST00000508809 NDUFS5O43920 106 aa4.04□□□□□ -1.76
COL4A3BP-206ENST00000508809 S100A2P29034 98 aa4.04□□□□□ -1.76
COL4A3BP-206ENST00000508809 HIGD1BQ9P298 99 aa4.04□□□□□ -1.76
COL4A3BP-206ENST00000508809 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
COL4A3BP-206ENST00000508809 PSPHP1O15172 72 aa4.03□□□□□ -1.76
COL4A3BP-206ENST00000508809 CCKP06307 115 aa4.03□□□□□ -1.76
COL4A3BP-206ENST00000508809 PRO1854Q9UHT4 67 aa4.03□□□□□ -1.76
COL4A3BP-206ENST00000508809 MDN1Q9NU22 5596 aa4.03□□□□□ -1.76
COL4A3BP-206ENST00000508809 TMEM256-PLSCR3K7ERE1 68 aa4.02□□□□□ -1.77
COL4A3BP-206ENST00000508809 TRACP01848 142 aa4.02□□□□□ -1.77
COL4A3BP-206ENST00000508809 ORMDL1Q9P0S3 153 aa4.02□□□□□ -1.77
COL4A3BP-206ENST00000508809 A8MU10 97 aa4.01□□□□□ -1.77
COL4A3BP-206ENST00000508809 CXCL6P80162 114 aa4.01□□□□□ -1.77
COL4A3BP-206ENST00000508809 WFDC13Q8IUB5 93 aa4.01□□□□□ -1.77
COL4A3BP-206ENST00000508809 C2orf91Q6ZV80 131 aa4□□□□□ -1.77
COL4A3BP-206ENST00000508809 CEND1Q8N111 149 aa4□□□□□ -1.77
COL4A3BP-206ENST00000508809 C14orf144Q96I85 54 aa4□□□□□ -1.77
COL4A3BP-206ENST00000508809 SMIM26A0A096LP01 95 aa3.99□□□□□ -1.77
COL4A3BP-206ENST00000508809 J3KT08 172 aa3.99□□□□□ -1.77
COL4A3BP-206ENST00000508809 DNAL4O96015 105 aa3.99□□□□□ -1.77
COL4A3BP-206ENST00000508809 KMT2DO14686 5537 aa3.98□□□□□ -1.77
COL4A3BP-206ENST00000508809 FXYD2P54710 66 aa3.97□□□□□ -1.77
COL4A3BP-206ENST00000508809 H1FX-AS1Q4G0G2 97 aa3.97□□□□□ -1.77
COL4A3BP-206ENST00000508809 RBM3P98179 157 aaKnown RBP3.96□□□□□ -1.78
COL4A3BP-206ENST00000508809 NDUFB1O75438 58 aa3.95□□□□□ -1.78
COL4A3BP-206ENST00000508809 BATFQ16520 125 aa3.95□□□□□ -1.78
COL4A3BP-206ENST00000508809 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
COL4A3BP-206ENST00000508809 Q6ZQT0 140 aa3.95□□□□□ -1.78
COL4A3BP-206ENST00000508809 VPS25Q9BRG1 176 aa3.95□□□□□ -1.78
COL4A3BP-206ENST00000508809 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
COL4A3BP-206ENST00000508809 COX6CP09669 75 aa3.94□□□□□ -1.78
COL4A3BP-206ENST00000508809 SPATA45Q537H7 98 aa3.94□□□□□ -1.78
COL4A3BP-206ENST00000508809 DSCR8Q96T75 97 aa3.94□□□□□ -1.78
COL4A3BP-206ENST00000508809 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
COL4A3BP-206ENST00000508809 A6NN06 94 aa3.93□□□□□ -1.78
COL4A3BP-206ENST00000508809 LYRM7Q5U5X0 104 aa3.93□□□□□ -1.78
COL4A3BP-206ENST00000508809 TSTD3H0UI37 97 aa3.92□□□□□ -1.78
COL4A3BP-206ENST00000508809 SCGB1A1P11684 91 aa3.92□□□□□ -1.78
COL4A3BP-206ENST00000508809 C9JAW5 83 aa3.91□□□□□ -1.78
COL4A3BP-206ENST00000508809 MT1BP07438 61 aa3.91□□□□□ -1.78
COL4A3BP-206ENST00000508809 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
COL4A3BP-206ENST00000508809 A0A1B0GW54 56 aa3.9□□□□□ -1.79
COL4A3BP-206ENST00000508809 PMAIP1Q13794 54 aa3.9□□□□□ -1.79
COL4A3BP-206ENST00000508809 VAMP8Q9BV40 100 aa3.9□□□□□ -1.79
COL4A3BP-206ENST00000508809 K7ERJ3 54 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms