RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 TNP1P09430 55 aa-0.43□□□□□ -2.48
COL4A3BP-205ENST00000508692 DEFB1P60022 68 aa-0.43□□□□□ -2.48
COL4A3BP-205ENST00000508692 MT1XP80297 61 aa-0.43□□□□□ -2.48
COL4A3BP-205ENST00000508692 WT1-ASQ06250 92 aa-0.43□□□□□ -2.48
COL4A3BP-205ENST00000508692 ERVK-7P63135 1459 aa-0.43□□□□□ -2.48
COL4A3BP-205ENST00000508692 PDE4DIPQ5VU43 2346 aa-0.43□□□□□ -2.48
COL4A3BP-205ENST00000508692 SPENQ96T58 3664 aaKnown RBP-0.43□□□□□ -2.48
COL4A3BP-205ENST00000508692 KIF1AQ12756 1690 aa-0.43□□□□□ -2.48
COL4A3BP-205ENST00000508692 DSPP15924 2871 aaKnown RBP-0.43□□□□□ -2.48
COL4A3BP-205ENST00000508692 COL12A1Q99715 3063 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 NBEAQ8NFP9 2946 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 ABCA8O94911 1581 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 FRYQ5TBA9 3013 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 RRBP1Q9P2E9 1410 aaKnown RBP-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 IGLV5-48A0A075B6I7 105 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 DEFA5Q01523 94 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 ADIRFQ15847 76 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 DEFB110Q30KQ9 67 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 TDRG1Q3Y452 100 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 DEFB106AQ8N104 65 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 S100A13Q99584 98 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 DNHD1Q96M86 4753 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 CCDC18Q5T9S5 1454 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 C3P01024 1663 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 CSMD1Q96PZ7 3565 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 LMTK2Q8IWU2 1503 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 SACSQ9NZJ4 4579 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 LRRIQ1Q96JM4 1722 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 CMYA5Q8N3K9 4069 aa-0.44□□□□□ -2.48
COL4A3BP-205ENST00000508692 HYDINQ4G0P3 5121 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 WDR87Q6ZQQ6 2873 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 DNAH1Q9P2D7 4330 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 DNAH7Q8WXX0 4024 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 GNG2P59768 71 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 CLPSL2Q6UWE3 100 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 NOP10Q9NPE3 64 aaKnown RBP-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 USP9YO00507 2555 aaPredicted RBP-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 TJP1Q07157 1748 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 CDC42BPAQ5VT25 1732 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 GCN1Q92616 2671 aaKnown RBP-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 SMARCA2P51531 1590 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 CDC42BPGQ6DT37 1551 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 KALRNO60229 2985 aa-0.45□□□□□ -2.48
COL4A3BP-205ENST00000508692 RICTORQ6R327 1708 aa-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 PARP4Q9UKK3 1724 aaKnown RBP-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 ACACBO00763 2458 aa-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 NBEAL2Q6ZNJ1 2754 aa-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 ETDCA0A1B0GVM5 59 aa-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 SMR3BP02814 79 aaPredicted RBP-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 SMIM13P0DJ93 91 aa-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 RPS27P42677 84 aaKnown RBP-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 RPS27LQ71UM5 84 aaKnown RBP-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 C18orf32Q8TCD1 76 aa-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 MT1LQ93083 61 aa-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 USP9XQ93008 2570 aaPredicted RBP-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 PLECQ15149 4684 aaKnown RBP-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 FAM186AA6NE01 2351 aa-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 SCRIBQ14160 1630 aa-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 UTP20O75691 2785 aaKnown RBP-0.46□□□□□ -2.48
COL4A3BP-205ENST00000508692 MAST1Q9Y2H9 1570 aa-0.47□□□□□ -2.48
COL4A3BP-205ENST00000508692 A0A087WXM4 84 aa-0.47□□□□□ -2.48
COL4A3BP-205ENST00000508692 A8MTW9 85 aa-0.47□□□□□ -2.48
COL4A3BP-205ENST00000508692 M0QZ58 72 aa-0.47□□□□□ -2.48
COL4A3BP-205ENST00000508692 MROH1Q8NDA8 1641 aa-0.47□□□□□ -2.48
COL4A3BP-205ENST00000508692 BPTFQ12830 3046 aa-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 SPTBN5Q9NRC6 3674 aaKnown RBP-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 PKD1L2Q7Z442 2459 aa-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 K7EMI3 77 aa-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 MT1HL1P0DM35 61 aa-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 CRIP1P50238 77 aa-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 MINOS1Q5TGZ0 78 aa-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 MYO5CQ9NQX4 1742 aa-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 A0A0C4DFX4 3053 aa-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 CEP290O15078 2479 aa-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 ABCC6O95255 1503 aa-0.48□□□□□ -2.49
COL4A3BP-205ENST00000508692 TIAM1Q13009 1591 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 DNMBPQ6XZF7 1577 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 MADDQ8WXG6 1647 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 ITPR1Q14643 2758 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 TEX15Q9BXT5 2789 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 ANKRD36CQ5JPF3 1778 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 H3BUT2 72 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 C6orf48Q9UBA6 75 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 RNF213Q63HN8 5207 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 DNAH8Q96JB1 4490 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 DUOX2Q9NRD8 1548 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 LRRK2Q5S007 2527 aa-0.49□□□□□ -2.49
COL4A3BP-205ENST00000508692 LY75O60449 1722 aa-0.5□□□□□ -2.49
COL4A3BP-205ENST00000508692 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.5□□□□□ -2.49
COL4A3BP-205ENST00000508692 ENHOQ6UWT2 76 aa-0.5□□□□□ -2.49
COL4A3BP-205ENST00000508692 RYR2Q92736 4967 aa-0.5□□□□□ -2.49
COL4A3BP-205ENST00000508692 ACACAQ13085 2346 aa-0.5□□□□□ -2.49
COL4A3BP-205ENST00000508692 M0QY20 66 aa-0.51□□□□□ -2.49
COL4A3BP-205ENST00000508692 ATXN8Q156A1 80 aa-0.51□□□□□ -2.49
COL4A3BP-205ENST00000508692 RIF1Q5UIP0 2472 aaKnown RBP-0.51□□□□□ -2.49
COL4A3BP-205ENST00000508692 CELSR3Q9NYQ7 3312 aa-0.51□□□□□ -2.49
COL4A3BP-205ENST00000508692 C5orf42Q9H799 3197 aa-0.51□□□□□ -2.49
COL4A3BP-205ENST00000508692 TLN2Q9Y4G6 2542 aa-0.52□□□□□ -2.49
COL4A3BP-205ENST00000508692 DYNC1H1Q14204 4646 aaKnown RBP-0.52□□□□□ -2.49
COL4A3BP-205ENST00000508692 DNAH17Q9UFH2 4485 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms