RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 TRBV7-4A0A0J9YYF1 115 aa1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 SPRR1BP22528 89 aa1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 PRLHP81277 87 aa1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 NREPQ16612 68 aa1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 C1orf137Q5JT78 98 aa1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 Q6Q795 121 aa1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 Q6ZQT0 140 aa1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 PHF5AQ7RTV0 110 aaKnown RBP1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 Q9BRP9 147 aa1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 RYR2Q92736 4967 aa1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 UBR4Q5T4S7 5183 aa1.3□□□□□ -2.2
TOPBP1-205ENST00000506779 SRRM2Q9UQ35 2752 aaKnown RBP1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 COL7A1Q02388 2944 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 TRBV7-7A0A0K0K1E9 115 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 IGLV7-43P04211 117 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 CRYGAP11844 174 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 Q6ZSA8 131 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 ST20-AS1Q8NBB2 130 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 LINC00846Q9NV44 126 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 SS18L2Q9UHA2 77 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 PSORS1C2Q9UIG4 136 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 HERC2O95714 4834 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 DNAH3Q8TD57 4116 aa1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 HUWE1Q7Z6Z7 4374 aaKnown RBP1.29□□□□□ -2.2
TOPBP1-205ENST00000506779 DYNC2H1Q8NCM8 4307 aaKnown RBP1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 A0A1B0GV72 72 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 J3KT08 172 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 ERC2-IT1O76042 136 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 HIST1H4AP62805 103 aaKnown RBP1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 HAMPP81172 84 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 CD164Q04900 197 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 FAM229BQ4G0N7 80 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 SPINK6Q6UWN8 80 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 SCXQ7RTU7 201 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 SSBP3-AS1Q7Z2R9 100 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 KRTAP13-1Q8IUC0 172 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 SMIM20Q8N5G0 67 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 SPANXA2-OT1Q8N9U9 137 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 SPRR4Q96PI1 79 aa1.28□□□□□ -2.2
TOPBP1-205ENST00000506779 SACSQ9NZJ4 4579 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 CMYA5Q8N3K9 4069 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 ATOX1O00244 68 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 NDUFB1O75438 58 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 MT-ATP8P03928 68 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 C9orf153Q5TBE3 101 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 C3orf22Q8N5N4 141 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 ANAPC13Q9BS18 74 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 C8orf17Q9NRJ1 99 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 HERC1Q15751 4861 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 DNAH9Q9NYC9 4486 aa1.27□□□□□ -2.21
TOPBP1-205ENST00000506779 A0A087WSZ3 146 aa1.26□□□□□ -2.21
TOPBP1-205ENST00000506779 IGKV3D-7A0A0C4DH55 119 aa1.26□□□□□ -2.21
TOPBP1-205ENST00000506779 A0A1W2PNM2 257 aa1.26□□□□□ -2.21
TOPBP1-205ENST00000506779 OXTP01178 125 aa1.26□□□□□ -2.21
TOPBP1-205ENST00000506779 SPAG11AQ6PDA7 123 aa1.26□□□□□ -2.21
TOPBP1-205ENST00000506779 LIMD2Q9BT23 127 aa1.26□□□□□ -2.21
TOPBP1-205ENST00000506779 DNAH1Q9P2D7 4330 aa1.26□□□□□ -2.21
TOPBP1-205ENST00000506779 ABCA13Q86UQ4 5058 aa1.25□□□□□ -2.21
TOPBP1-205ENST00000506779 FAM236AA0A1B0GUQ0 79 aa1.25□□□□□ -2.21
TOPBP1-205ENST00000506779 FAM236BA0A1B0GV22 79 aa1.25□□□□□ -2.21
TOPBP1-205ENST00000506779 A8MWP4 228 aa1.25□□□□□ -2.21
TOPBP1-205ENST00000506779 SPINK1P00995 79 aa1.25□□□□□ -2.21
TOPBP1-205ENST00000506779 RPS29P62273 56 aaKnown RBP1.25□□□□□ -2.21
TOPBP1-205ENST00000506779 ASB16-AS1Q495Z4 193 aa1.25□□□□□ -2.21
TOPBP1-205ENST00000506779 Q5XG85 94 aa1.25□□□□□ -2.21
TOPBP1-205ENST00000506779 TRAV7A0A075B6U4 112 aa1.24□□□□□ -2.21
TOPBP1-205ENST00000506779 HCG22E2RYF7 251 aa1.24□□□□□ -2.21
TOPBP1-205ENST00000506779 UQCRQO14949 82 aa1.24□□□□□ -2.21
TOPBP1-205ENST00000506779 IGKV4-1P06312 121 aa1.24□□□□□ -2.21
TOPBP1-205ENST00000506779 KRTAP12-4P60329 112 aa1.24□□□□□ -2.21
TOPBP1-205ENST00000506779 PRR15Q8IV56 129 aa1.24□□□□□ -2.21
TOPBP1-205ENST00000506779 SERP2Q8N6R1 65 aa1.24□□□□□ -2.21
TOPBP1-205ENST00000506779 LINC00304Q8N9R0 145 aa1.24□□□□□ -2.21
TOPBP1-205ENST00000506779 LINC00472Q9H8W2 130 aa1.24□□□□□ -2.21
TOPBP1-205ENST00000506779 TP53AIP1Q9HCN2 124 aa1.24□□□□□ -2.21
TOPBP1-205ENST00000506779 A0A087WVE0 104 aa1.23□□□□□ -2.21
TOPBP1-205ENST00000506779 C8orf87E5RJ46 101 aa1.23□□□□□ -2.21
TOPBP1-205ENST00000506779 K7EQZ3 153 aa1.23□□□□□ -2.21
TOPBP1-205ENST00000506779 NDUFC1O43677 76 aa1.23□□□□□ -2.21
TOPBP1-205ENST00000506779 COX7CP15954 63 aa1.23□□□□□ -2.21
TOPBP1-205ENST00000506779 HRCT1Q6UXD1 115 aa1.23□□□□□ -2.21
TOPBP1-205ENST00000506779 CASC2Q6XLA1 102 aa1.23□□□□□ -2.21
TOPBP1-205ENST00000506779 SMIM26A0A096LP01 95 aa1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 A0A0G2JQZ4 141 aa1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 hDV103S1A0JD37 113 aa1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 H3BPC8 53 aa1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 SMR3BP02814 79 aaPredicted RBP1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 MP68P56378 58 aa1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 LINC00313P59037 77 aa1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 KRTAP12-3P60328 96 aa1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 STARD9Q9P2P6 4700 aa1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 CSMD3Q7Z407 3707 aa1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 KIAA1109Q2LD37 5005 aa1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 PLECQ15149 4684 aaKnown RBP1.22□□□□□ -2.21
TOPBP1-205ENST00000506779 VPS13DQ5THJ4 4388 aa1.21□□□□□ -2.22
TOPBP1-205ENST00000506779 IGHV6-1A0A0B4J1U7 121 aa1.21□□□□□ -2.22
TOPBP1-205ENST00000506779 C1orf195Q5TG92 126 aa1.21□□□□□ -2.22
TOPBP1-205ENST00000506779 Q5VSD8 79 aa1.21□□□□□ -2.22
TOPBP1-205ENST00000506779 SPINT4Q6UDR6 99 aa1.21□□□□□ -2.22
TOPBP1-205ENST00000506779 TMEM254Q8TBM7 123 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms