RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 NEBP20929 6669 aa3.4□□□□□ -1.86
NPIPB3-203ENST00000504841 HSD52Q0P140 79 aa3.4□□□□□ -1.87
NPIPB3-203ENST00000504841 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
NPIPB3-203ENST00000504841 C12orf57Q99622 126 aa3.4□□□□□ -1.87
NPIPB3-203ENST00000504841 A0A1B0GX51 115 aa3.39□□□□□ -1.87
NPIPB3-203ENST00000504841 HRES1P13985 223 aa3.39□□□□□ -1.87
NPIPB3-203ENST00000504841 SNHG12Q9BXW3 62 aa3.39□□□□□ -1.87
NPIPB3-203ENST00000504841 SS18L2Q9UHA2 77 aa3.39□□□□□ -1.87
NPIPB3-203ENST00000504841 KRTAP16-1A8MUX0 517 aa3.38□□□□□ -1.87
NPIPB3-203ENST00000504841 H3BQ85 93 aa3.38□□□□□ -1.87
NPIPB3-203ENST00000504841 SIGMAR1Q99720 223 aa3.38□□□□□ -1.87
NPIPB3-203ENST00000504841 COX6CP09669 75 aa3.37□□□□□ -1.87
NPIPB3-203ENST00000504841 FXYD2P54710 66 aa3.37□□□□□ -1.87
NPIPB3-203ENST00000504841 A0A087WSZ3 146 aa3.36□□□□□ -1.87
NPIPB3-203ENST00000504841 SMIM6P0DI80 62 aa3.36□□□□□ -1.87
NPIPB3-203ENST00000504841 MPLKIPQ8TAP9 179 aa3.36□□□□□ -1.87
NPIPB3-203ENST00000504841 PSMB2P49721 201 aa3.35□□□□□ -1.87
NPIPB3-203ENST00000504841 M0R143 59 aa3.34□□□□□ -1.87
NPIPB3-203ENST00000504841 NDUFV3P56181 108 aaKnown RBP3.34□□□□□ -1.87
NPIPB3-203ENST00000504841 LINC00313P59037 77 aa3.34□□□□□ -1.87
NPIPB3-203ENST00000504841 NOTCH2NLQ7Z3S9 236 aa3.34□□□□□ -1.87
NPIPB3-203ENST00000504841 Q8N9P0 234 aaPredicted RBP3.34□□□□□ -1.87
NPIPB3-203ENST00000504841 FAM218AQ96MZ4 157 aa3.34□□□□□ -1.87
NPIPB3-203ENST00000504841 DNAL4O96015 105 aa3.33□□□□□ -1.88
NPIPB3-203ENST00000504841 TEN1Q86WV5 123 aa3.33□□□□□ -1.88
NPIPB3-203ENST00000504841 MTURNQ8N3F0 131 aa3.33□□□□□ -1.88
NPIPB3-203ENST00000504841 TMEM256-PLSCR3K7ERE1 68 aa3.32□□□□□ -1.88
NPIPB3-203ENST00000504841 K7ERJ3 54 aa3.32□□□□□ -1.88
NPIPB3-203ENST00000504841 TRACP01848 142 aa3.32□□□□□ -1.88
NPIPB3-203ENST00000504841 IGKV4-1P06312 121 aa3.32□□□□□ -1.88
NPIPB3-203ENST00000504841 FABP2P12104 132 aa3.32□□□□□ -1.88
NPIPB3-203ENST00000504841 SVIPQ8NHG7 77 aa3.32□□□□□ -1.88
NPIPB3-203ENST00000504841 ORMDL1Q9P0S3 153 aa3.32□□□□□ -1.88
NPIPB3-203ENST00000504841 A8MWP4 228 aa3.31□□□□□ -1.88
NPIPB3-203ENST00000504841 TSTD3H0UI37 97 aa3.31□□□□□ -1.88
NPIPB3-203ENST00000504841 H3BMG7 143 aa3.31□□□□□ -1.88
NPIPB3-203ENST00000504841 SCGB1C2P0DMR2 95 aa3.31□□□□□ -1.88
NPIPB3-203ENST00000504841 LOC105371267A0A1B0GV96 52 aa3.3□□□□□ -1.88
NPIPB3-203ENST00000504841 UBE2V1Q13404 147 aa3.3□□□□□ -1.88
NPIPB3-203ENST00000504841 DEFB116Q30KQ4 102 aa3.3□□□□□ -1.88
NPIPB3-203ENST00000504841 IGHV6-1A0A0B4J1U7 121 aa3.29□□□□□ -1.88
NPIPB3-203ENST00000504841 A0A1B0GV72 72 aa3.29□□□□□ -1.88
NPIPB3-203ENST00000504841 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
NPIPB3-203ENST00000504841 ANKRD29Q8N6D5 301 aa3.29□□□□□ -1.88
NPIPB3-203ENST00000504841 TRBV7-4A0A0J9YYF1 115 aa3.28□□□□□ -1.88
NPIPB3-203ENST00000504841 A0A1W2PNM2 257 aa3.27□□□□□ -1.89
NPIPB3-203ENST00000504841 BAALC-AS2P0C853 105 aa3.27□□□□□ -1.89
NPIPB3-203ENST00000504841 SPINK7P58062 85 aa3.27□□□□□ -1.89
NPIPB3-203ENST00000504841 LYRM7Q5U5X0 104 aa3.27□□□□□ -1.89
NPIPB3-203ENST00000504841 WFDC13Q8IUB5 93 aa3.27□□□□□ -1.89
NPIPB3-203ENST00000504841 RBM3P98179 157 aaKnown RBP3.26□□□□□ -1.89
NPIPB3-203ENST00000504841 ATXN8Q156A1 80 aa3.26□□□□□ -1.89
NPIPB3-203ENST00000504841 A0A1B0GW54 56 aa3.25□□□□□ -1.89
NPIPB3-203ENST00000504841 JMJD7-PLA2G4BH0Y9G9 81 aa3.25□□□□□ -1.89
NPIPB3-203ENST00000504841 ZCCHC13Q8WW36 166 aaKnown RBP3.25□□□□□ -1.89
NPIPB3-203ENST00000504841 DSCR8Q96T75 97 aa3.25□□□□□ -1.89
NPIPB3-203ENST00000504841 CCKP06307 115 aa3.24□□□□□ -1.89
NPIPB3-203ENST00000504841 PDE6GP18545 87 aa3.24□□□□□ -1.89
NPIPB3-203ENST00000504841 A6NN06 94 aa3.23□□□□□ -1.89
NPIPB3-203ENST00000504841 C9JAW5 83 aa3.23□□□□□ -1.89
NPIPB3-203ENST00000504841 A0A1B0GVX0 72 aa3.22□□□□□ -1.89
NPIPB3-203ENST00000504841 C8orf87E5RJ46 101 aa3.22□□□□□ -1.89
NPIPB3-203ENST00000504841 BATFQ16520 125 aa3.22□□□□□ -1.89
NPIPB3-203ENST00000504841 LINC00472Q9H8W2 130 aa3.22□□□□□ -1.89
NPIPB3-203ENST00000504841 LOC110117498A0A087WWA1 95 aa3.21□□□□□ -1.9
NPIPB3-203ENST00000504841 NAA38Q9BRA0 125 aaKnown RBP3.21□□□□□ -1.9
NPIPB3-203ENST00000504841 A0A1W2PPM0 123 aa3.2□□□□□ -1.9
NPIPB3-203ENST00000504841 J3KT08 172 aa3.2□□□□□ -1.9
NPIPB3-203ENST00000504841 TAX1BP3O14907 124 aa3.2□□□□□ -1.9
NPIPB3-203ENST00000504841 Q6ZQT0 140 aa3.2□□□□□ -1.9
NPIPB3-203ENST00000504841 VPS25Q9BRG1 176 aa3.2□□□□□ -1.9
NPIPB3-203ENST00000504841 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
NPIPB3-203ENST00000504841 H3BT86 120 aa3.19□□□□□ -1.9
NPIPB3-203ENST00000504841 COL5A1-AS1Q5SY13 56 aa3.19□□□□□ -1.9
NPIPB3-203ENST00000504841 IGKV2-30P06310 120 aa3.17□□□□□ -1.9
NPIPB3-203ENST00000504841 H1FX-AS1Q4G0G2 97 aa3.17□□□□□ -1.9
NPIPB3-203ENST00000504841 NDUFB1O75438 58 aa3.16□□□□□ -1.9
NPIPB3-203ENST00000504841 C14orf132Q9NPU4 83 aa3.16□□□□□ -1.9
NPIPB3-203ENST00000504841 FAM236AA0A1B0GUQ0 79 aa3.15□□□□□ -1.91
NPIPB3-203ENST00000504841 FAM236BA0A1B0GV22 79 aa3.15□□□□□ -1.91
NPIPB3-203ENST00000504841 NREPQ16612 68 aa3.15□□□□□ -1.91
NPIPB3-203ENST00000504841 SPCS1Q9Y6A9 102 aa3.15□□□□□ -1.91
NPIPB3-203ENST00000504841 MT1BP07438 61 aa3.14□□□□□ -1.91
NPIPB3-203ENST00000504841 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
NPIPB3-203ENST00000504841 Q5VV11 94 aa3.14□□□□□ -1.91
NPIPB3-203ENST00000504841 IGKV3D-7A0A0C4DH55 119 aa3.13□□□□□ -1.91
NPIPB3-203ENST00000504841 C8orf17Q9NRJ1 99 aa3.13□□□□□ -1.91
NPIPB3-203ENST00000504841 K7EP34 96 aa3.12□□□□□ -1.91
NPIPB3-203ENST00000504841 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
NPIPB3-203ENST00000504841 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
NPIPB3-203ENST00000504841 GTF2H5Q6ZYL4 71 aa3.12□□□□□ -1.91
NPIPB3-203ENST00000504841 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
NPIPB3-203ENST00000504841 F8W1H4 67 aa3.11□□□□□ -1.91
NPIPB3-203ENST00000504841 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
NPIPB3-203ENST00000504841 Q6ZVQ6 151 aa3.11□□□□□ -1.91
NPIPB3-203ENST00000504841 PRR15Q8IV56 129 aa3.11□□□□□ -1.91
NPIPB3-203ENST00000504841 IGKV2D-30A0A075B6S6 120 aa3.1□□□□□ -1.91
NPIPB3-203ENST00000504841 C5orf47Q569G3 176 aa3.1□□□□□ -1.91
NPIPB3-203ENST00000504841 PRO0461Q9UI25 63 aa3.1□□□□□ -1.91
NPIPB3-203ENST00000504841 PCP4L1A6NKN8 68 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms