RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 C14orf177Q52M58 125 aa4.58□□□□□ -1.68
NEDD9-208ENST00000504387 CIRBP-AS1Q8TBR5 109 aa4.58□□□□□ -1.68
NEDD9-208ENST00000504387 DNAH9Q9NYC9 4486 aa4.58□□□□□ -1.68
NEDD9-208ENST00000504387 Q96NJ1 140 aa4.57□□□□□ -1.68
NEDD9-208ENST00000504387 MRPL34Q9BQ48 92 aaKnown RBP4.57□□□□□ -1.68
NEDD9-208ENST00000504387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.57□□□□□ -1.68
NEDD9-208ENST00000504387 A0A1B0GVX0 72 aa4.57□□□□□ -1.68
NEDD9-208ENST00000504387 C8orf87E5RJ46 101 aa4.57□□□□□ -1.68
NEDD9-208ENST00000504387 SPINK1P00995 79 aa4.56□□□□□ -1.68
NEDD9-208ENST00000504387 NBDYA0A0U1RRE5 68 aa4.55□□□□□ -1.68
NEDD9-208ENST00000504387 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
NEDD9-208ENST00000504387 APLNQ9ULZ1 77 aa4.55□□□□□ -1.68
NEDD9-208ENST00000504387 FRAS1Q86XX4 4008 aa4.54□□□□□ -1.68
NEDD9-208ENST00000504387 A0A1B0GU69 56 aa4.54□□□□□ -1.68
NEDD9-208ENST00000504387 LY6G6CO95867 125 aa4.53□□□□□ -1.68
NEDD9-208ENST00000504387 RTL8CO15255 209 aa4.53□□□□□ -1.68
NEDD9-208ENST00000504387 DNHD1Q96M86 4753 aa4.53□□□□□ -1.68
NEDD9-208ENST00000504387 Q6ZR54 194 aa4.52□□□□□ -1.69
NEDD9-208ENST00000504387 DNAH7Q8WXX0 4024 aa4.52□□□□□ -1.69
NEDD9-208ENST00000504387 DMBT1Q9UGM3 2413 aaPredicted RBP4.52□□□□□ -1.69
NEDD9-208ENST00000504387 SPRR1BP22528 89 aa4.51□□□□□ -1.69
NEDD9-208ENST00000504387 PLAC8Q9NZF1 115 aa4.51□□□□□ -1.69
NEDD9-208ENST00000504387 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
NEDD9-208ENST00000504387 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
NEDD9-208ENST00000504387 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
NEDD9-208ENST00000504387 ACYP2P14621 99 aa4.5□□□□□ -1.69
NEDD9-208ENST00000504387 IGLV5-52A0A0A0MRZ9 124 aa4.5□□□□□ -1.69
NEDD9-208ENST00000504387 CSAG1Q6PB30 78 aa4.5□□□□□ -1.69
NEDD9-208ENST00000504387 WWC2-AS2Q96NR7 200 aa4.48□□□□□ -1.69
NEDD9-208ENST00000504387 HUWE1Q7Z6Z7 4374 aaKnown RBP4.48□□□□□ -1.69
NEDD9-208ENST00000504387 MEGF8Q7Z7M0 2845 aa4.48□□□□□ -1.69
NEDD9-208ENST00000504387 DNAH1Q9P2D7 4330 aa4.48□□□□□ -1.69
NEDD9-208ENST00000504387 A0A087WTM6 91 aa4.48□□□□□ -1.69
NEDD9-208ENST00000504387 LINC01554Q52M75 96 aa4.48□□□□□ -1.69
NEDD9-208ENST00000504387 NUPR2A6NF83 97 aa4.47□□□□□ -1.69
NEDD9-208ENST00000504387 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
NEDD9-208ENST00000504387 ASB16-AS1Q495Z4 193 aa4.46□□□□□ -1.7
NEDD9-208ENST00000504387 CRIPTQ9P021 101 aa4.46□□□□□ -1.7
NEDD9-208ENST00000504387 KRTAP13-1Q8IUC0 172 aa4.46□□□□□ -1.7
NEDD9-208ENST00000504387 ZNF706Q9Y5V0 76 aaPredicted RBP4.44□□□□□ -1.7
NEDD9-208ENST00000504387 SPACA4Q8TDM5 124 aa4.44□□□□□ -1.7
NEDD9-208ENST00000504387 Q8N1X5 172 aa4.44□□□□□ -1.7
NEDD9-208ENST00000504387 ZNF861PO60384 105 aa4.43□□□□□ -1.7
NEDD9-208ENST00000504387 C1orf134Q5TEV5 83 aa4.43□□□□□ -1.7
NEDD9-208ENST00000504387 UQCR11O14957 56 aa4.42□□□□□ -1.7
NEDD9-208ENST00000504387 Q6ZRN7 208 aaPredicted RBP4.4□□□□□ -1.7
NEDD9-208ENST00000504387 PLA2G1BP04054 148 aaKnown RBP4.4□□□□□ -1.71
NEDD9-208ENST00000504387 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.71
NEDD9-208ENST00000504387 DMAC1Q96GE9 116 aa4.39□□□□□ -1.71
NEDD9-208ENST00000504387 PLECQ15149 4684 aaKnown RBP4.39□□□□□ -1.71
NEDD9-208ENST00000504387 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
NEDD9-208ENST00000504387 IGLV7-43P04211 117 aa4.38□□□□□ -1.71
NEDD9-208ENST00000504387 KRTAP13-3Q3SY46 172 aa4.38□□□□□ -1.71
NEDD9-208ENST00000504387 LINC00483Q53H64 154 aa4.37□□□□□ -1.71
NEDD9-208ENST00000504387 DNAH17Q9UFH2 4485 aa4.37□□□□□ -1.71
NEDD9-208ENST00000504387 KRTAP10-2P60368 255 aa4.36□□□□□ -1.71
NEDD9-208ENST00000504387 FAM229AH3BQW9 127 aa4.35□□□□□ -1.71
NEDD9-208ENST00000504387 KMT2AQ03164 3969 aa4.35□□□□□ -1.71
NEDD9-208ENST00000504387 DYNC2H1Q8NCM8 4307 aaKnown RBP4.34□□□□□ -1.72
NEDD9-208ENST00000504387 PRKDCP78527 4128 aaKnown RBP4.34□□□□□ -1.72
NEDD9-208ENST00000504387 SMR3BP02814 79 aaPredicted RBP4.32□□□□□ -1.72
NEDD9-208ENST00000504387 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
NEDD9-208ENST00000504387 STARD9Q9P2P6 4700 aa4.31□□□□□ -1.72
NEDD9-208ENST00000504387 ALMS1Q8TCU4 4167 aa4.3□□□□□ -1.72
NEDD9-208ENST00000504387 TYMSOSQ8TAI1 123 aa4.29□□□□□ -1.72
NEDD9-208ENST00000504387 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
NEDD9-208ENST00000504387 C9orf92A6NGG3 77 aa4.28□□□□□ -1.72
NEDD9-208ENST00000504387 DNAH6Q9C0G6 4158 aa4.28□□□□□ -1.72
NEDD9-208ENST00000504387 KRTAP10-1P60331 282 aa4.28□□□□□ -1.72
NEDD9-208ENST00000504387 SSBP3-AS1Q7Z2R9 100 aa4.27□□□□□ -1.73
NEDD9-208ENST00000504387 Q6ZSA8 131 aa4.26□□□□□ -1.73
NEDD9-208ENST00000504387 HECTD4Q9Y4D8 3996 aa4.26□□□□□ -1.73
NEDD9-208ENST00000504387 H0YAA0 97 aa4.26□□□□□ -1.73
NEDD9-208ENST00000504387 DNAH11Q96DT5 4516 aa4.25□□□□□ -1.73
NEDD9-208ENST00000504387 LINC00304Q8N9R0 145 aa4.24□□□□□ -1.73
NEDD9-208ENST00000504387 KRTAP16-1A8MUX0 517 aa4.23□□□□□ -1.73
NEDD9-208ENST00000504387 DNAH2Q9P225 4427 aa4.23□□□□□ -1.73
NEDD9-208ENST00000504387 VPS13DQ5THJ4 4388 aa4.22□□□□□ -1.73
NEDD9-208ENST00000504387 A0A0D9SG42 100 aa4.21□□□□□ -1.73
NEDD9-208ENST00000504387 A0A1B0GU33 70 aa4.21□□□□□ -1.73
NEDD9-208ENST00000504387 LRP1BQ9NZR2 4599 aa4.21□□□□□ -1.74
NEDD9-208ENST00000504387 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
NEDD9-208ENST00000504387 ROMO1P60602 79 aa4.19□□□□□ -1.74
NEDD9-208ENST00000504387 A8MUU9 505 aa4.19□□□□□ -1.74
NEDD9-208ENST00000504387 SPINT4Q6UDR6 99 aa4.15□□□□□ -1.74
NEDD9-208ENST00000504387 HYDINQ4G0P3 5121 aa4.14□□□□□ -1.75
NEDD9-208ENST00000504387 H1FX-AS1Q4G0G2 97 aa4.14□□□□□ -1.75
NEDD9-208ENST00000504387 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
NEDD9-208ENST00000504387 KRTAP1-4P0C5Y4 121 aa4.13□□□□□ -1.75
NEDD9-208ENST00000504387 P0C880 135 aa4.13□□□□□ -1.75
NEDD9-208ENST00000504387 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
NEDD9-208ENST00000504387 VPS13BQ7Z7G8 4022 aa4.12□□□□□ -1.75
NEDD9-208ENST00000504387 K7ERS5 55 aa4.12□□□□□ -1.75
NEDD9-208ENST00000504387 FAT2Q9NYQ8 4349 aa4.12□□□□□ -1.75
NEDD9-208ENST00000504387 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
NEDD9-208ENST00000504387 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.75
NEDD9-208ENST00000504387 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
NEDD9-208ENST00000504387 PKD1P98161 4303 aa4.05□□□□□ -1.76
NEDD9-208ENST00000504387 FAT1Q14517 4588 aa4.04□□□□□ -1.76
NEDD9-208ENST00000504387 TPRXLQ17RH7 258 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms