RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 KRTAP13-3Q3SY46 172 aa10.64□□□□□ -0.71
POLR2J3-209ENST00000504157 LINC00483Q53H64 154 aa10.64□□□□□ -0.71
POLR2J3-209ENST00000504157 DNAH10Q8IVF4 4471 aa10.62□□□□□ -0.71
POLR2J3-209ENST00000504157 CDK2AP2O75956 126 aa10.61□□□□□ -0.71
POLR2J3-209ENST00000504157 MIR22HGQ0VDD5 57 aa10.61□□□□□ -0.71
POLR2J3-209ENST00000504157 DMAC1Q96GE9 116 aa10.61□□□□□ -0.71
POLR2J3-209ENST00000504157 Q5W150 140 aa10.6□□□□□ -0.71
POLR2J3-209ENST00000504157 CSAG1Q6PB30 78 aa10.6□□□□□ -0.71
POLR2J3-209ENST00000504157 NOTCH2NLQ7Z3S9 236 aa10.6□□□□□ -0.71
POLR2J3-209ENST00000504157 RETNLBQ9BQ08 111 aa10.6□□□□□ -0.71
POLR2J3-209ENST00000504157 IGLV9-49A0A0B4J1Y8 123 aa10.58□□□□□ -0.72
POLR2J3-209ENST00000504157 UQCR11O14957 56 aa10.58□□□□□ -0.72
POLR2J3-209ENST00000504157 MEGF8Q7Z7M0 2845 aa10.58□□□□□ -0.72
POLR2J3-209ENST00000504157 ZNF706Q9Y5V0 76 aaPredicted RBP10.53□□□□□ -0.72
POLR2J3-209ENST00000504157 HUWE1Q7Z6Z7 4374 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-209ENST00000504157 LYSTQ99698 3801 aa10.51□□□□□ -0.73
POLR2J3-209ENST00000504157 WWC2-AS2Q96NR7 200 aa10.51□□□□□ -0.73
POLR2J3-209ENST00000504157 PRKDCP78527 4128 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-209ENST00000504157 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
POLR2J3-209ENST00000504157 COL7A1Q02388 2944 aa10.49□□□□□ -0.73
POLR2J3-209ENST00000504157 PANO1I0J062 215 aa10.49□□□□□ -0.73
POLR2J3-209ENST00000504157 CSMD3Q7Z407 3707 aa10.48□□□□□ -0.73
POLR2J3-209ENST00000504157 ZNF861PO60384 105 aa10.45□□□□□ -0.74
POLR2J3-209ENST00000504157 UBE2DNLQ8IWF7 75 aa10.45□□□□□ -0.74
POLR2J3-209ENST00000504157 SPACA4Q8TDM5 124 aa10.45□□□□□ -0.74
POLR2J3-209ENST00000504157 FBN3Q75N90 2809 aa10.41□□□□□ -0.74
POLR2J3-209ENST00000504157 APLNQ9ULZ1 77 aa10.41□□□□□ -0.74
POLR2J3-209ENST00000504157 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.38□□□□□ -0.75
POLR2J3-209ENST00000504157 STAB2Q8WWQ8 2551 aa10.38□□□□□ -0.75
POLR2J3-209ENST00000504157 Q6ZRN7 208 aaPredicted RBP10.36□□□□□ -0.75
POLR2J3-209ENST00000504157 DYNC2H1Q8NCM8 4307 aaKnown RBP10.36□□□□□ -0.75
POLR2J3-209ENST00000504157 IGLV5-52A0A0A0MRZ9 124 aa10.35□□□□□ -0.75
POLR2J3-209ENST00000504157 C1orf134Q5TEV5 83 aa10.34□□□□□ -0.75
POLR2J3-209ENST00000504157 IGKV2-30P06310 120 aa10.33□□□□□ -0.76
POLR2J3-209ENST00000504157 TGP01266 2768 aa10.32□□□□□ -0.76
POLR2J3-209ENST00000504157 NBDYA0A0U1RRE5 68 aa10.32□□□□□ -0.76
POLR2J3-209ENST00000504157 FAM229AH3BQW9 127 aa10.32□□□□□ -0.76
POLR2J3-209ENST00000504157 PSORS1C2Q9UIG4 136 aa10.32□□□□□ -0.76
POLR2J3-209ENST00000504157 IGLV7-43P04211 117 aa10.31□□□□□ -0.76
POLR2J3-209ENST00000504157 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
POLR2J3-209ENST00000504157 ANAPC11Q9NYG5 84 aa10.29□□□□□ -0.76
POLR2J3-209ENST00000504157 DNAH8Q96JB1 4490 aa10.28□□□□□ -0.76
POLR2J3-209ENST00000504157 ROMO1P60602 79 aa10.25□□□□□ -0.77
POLR2J3-209ENST00000504157 KRTAP25-1Q3LHN0 102 aa10.25□□□□□ -0.77
POLR2J3-209ENST00000504157 A8MUU9 505 aa10.19□□□□□ -0.78
POLR2J3-209ENST00000504157 SSBP3-AS1Q7Z2R9 100 aa10.19□□□□□ -0.78
POLR2J3-209ENST00000504157 A0A087WTM6 91 aa10.18□□□□□ -0.78
POLR2J3-209ENST00000504157 CIRBP-AS1Q8TBR5 109 aa10.17□□□□□ -0.78
POLR2J3-209ENST00000504157 DNAH7Q8WXX0 4024 aa10.16□□□□□ -0.78
POLR2J3-209ENST00000504157 FRAS1Q86XX4 4008 aa10.13□□□□□ -0.79
POLR2J3-209ENST00000504157 IGKV2D-30A0A075B6S6 120 aa10.13□□□□□ -0.79
POLR2J3-209ENST00000504157 NUPR2A6NF83 97 aa10.12□□□□□ -0.79
POLR2J3-209ENST00000504157 STARD9Q9P2P6 4700 aa10.12□□□□□ -0.79
POLR2J3-209ENST00000504157 LINC00304Q8N9R0 145 aa10.11□□□□□ -0.79
POLR2J3-209ENST00000504157 PLECQ15149 4684 aaKnown RBP10.11□□□□□ -0.79
POLR2J3-209ENST00000504157 HECTD4Q9Y4D8 3996 aa10.11□□□□□ -0.79
POLR2J3-209ENST00000504157 LY6G6CO95867 125 aa10.1□□□□□ -0.79
POLR2J3-209ENST00000504157 KRTAP16-1A8MUX0 517 aa10.1□□□□□ -0.79
POLR2J3-209ENST00000504157 H0YAA0 97 aa10.07□□□□□ -0.8
POLR2J3-209ENST00000504157 DNAH17Q9UFH2 4485 aa10.07□□□□□ -0.8
POLR2J3-209ENST00000504157 VPS13DQ5THJ4 4388 aa10.06□□□□□ -0.8
POLR2J3-209ENST00000504157 Q6ZSA8 131 aa10.06□□□□□ -0.8
POLR2J3-209ENST00000504157 SPINK1P00995 79 aa9.99□□□□□ -0.81
POLR2J3-209ENST00000504157 P0C880 135 aa9.97□□□□□ -0.81
POLR2J3-209ENST00000504157 KRTAP13-2Q52LG2 175 aa9.92□□□□□ -0.82
POLR2J3-209ENST00000504157 A0A1B0GU33 70 aa9.9□□□□□ -0.83
POLR2J3-209ENST00000504157 DNAH2Q9P225 4427 aa9.88□□□□□ -0.83
POLR2J3-209ENST00000504157 Q8N1X5 172 aa9.88□□□□□ -0.83
POLR2J3-209ENST00000504157 TYMSOSQ8TAI1 123 aa9.86□□□□□ -0.83
POLR2J3-209ENST00000504157 KMT2AQ03164 3969 aa9.86□□□□□ -0.83
POLR2J3-209ENST00000504157 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
POLR2J3-209ENST00000504157 DNAH11Q96DT5 4516 aa9.8□□□□□ -0.84
POLR2J3-209ENST00000504157 HYDINQ4G0P3 5121 aa9.8□□□□□ -0.84
POLR2J3-209ENST00000504157 CRIPTQ9P021 101 aa9.79□□□□□ -0.84
POLR2J3-209ENST00000504157 FLG2Q5D862 2391 aaPredicted RBP9.79□□□□□ -0.84
POLR2J3-209ENST00000504157 SACSQ9NZJ4 4579 aa9.77□□□□□ -0.85
POLR2J3-209ENST00000504157 K7ERS5 55 aa9.77□□□□□ -0.85
POLR2J3-209ENST00000504157 KMT2CQ8NEZ4 4911 aaKnown RBP9.74□□□□□ -0.85
POLR2J3-209ENST00000504157 KRTAP1-4P0C5Y4 121 aa9.74□□□□□ -0.85
POLR2J3-209ENST00000504157 DNAH6Q9C0G6 4158 aa9.69□□□□□ -0.86
POLR2J3-209ENST00000504157 DNAH5Q8TE73 4624 aa9.68□□□□□ -0.86
POLR2J3-209ENST00000504157 RYR2Q92736 4967 aa9.63□□□□□ -0.87
POLR2J3-209ENST00000504157 SPINT4Q6UDR6 99 aa9.62□□□□□ -0.87
POLR2J3-209ENST00000504157 KRTAP10-2P60368 255 aa9.61□□□□□ -0.87
POLR2J3-209ENST00000504157 KRTAP3-1Q9BYR8 98 aa9.61□□□□□ -0.87
POLR2J3-209ENST00000504157 RPS29P62273 56 aaKnown RBP9.6□□□□□ -0.87
POLR2J3-209ENST00000504157 COX6B2Q6YFQ2 88 aa9.6□□□□□ -0.87
POLR2J3-209ENST00000504157 LRP1BQ9NZR2 4599 aa9.59□□□□□ -0.88
POLR2J3-209ENST00000504157 TPRXLQ17RH7 258 aa9.56□□□□□ -0.88
POLR2J3-209ENST00000504157 RYR3Q15413 4870 aa9.55□□□□□ -0.88
POLR2J3-209ENST00000504157 FAT2Q9NYQ8 4349 aa9.55□□□□□ -0.88
POLR2J3-209ENST00000504157 KRTAP15-1Q3LI76 137 aa9.54□□□□□ -0.88
POLR2J3-209ENST00000504157 C20orf166-AS1Q96NR2 134 aa9.54□□□□□ -0.88
POLR2J3-209ENST00000504157 NDUFAF8A1L188 74 aa9.52□□□□□ -0.88
POLR2J3-209ENST00000504157 KRTAP10-1P60331 282 aa9.52□□□□□ -0.89
POLR2J3-209ENST00000504157 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
POLR2J3-209ENST00000504157 PKD1P98161 4303 aa9.46□□□□□ -0.9
POLR2J3-209ENST00000504157 VPS13BQ7Z7G8 4022 aa9.45□□□□□ -0.9
POLR2J3-209ENST00000504157 PKHD1P08F94 4074 aa9.39□□□□□ -0.91
POLR2J3-209ENST00000504157 A0A1B0GVY2 172 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms